| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is purA [H]
Identifier: 159040611
GI number: 159040611
Start: 31977
End: 32987
Strand: Reverse
Name: purA [H]
Synonym: Cmaq_0019
Alternate gene names: 159040611
Gene position: 32987-31977 (Counterclockwise)
Preceding gene: 159040616
Following gene: 159040610
Centisome position: 1.59
GC content: 47.58
Gene sequence:
>1011_bases GTGCCTCTTACAGTAGTTGTGGGTGGTTTCTTCGGTGACGAGGGTAAGGGCAAAGTCATCTCATACCTCAGTCTCGTTGA TAAACCCGACATATGCGTTAGGACAGGTTCAATAAATGCAGGACACACGGTTAATCTAAGGGACCGTACATGGAAGGTTA GGATAATACCCTCATGCTTCCCTAATGAGGAAACCAGGTTAATGATTGCCCCAGGGGCTTTATTCAGTATTAGTGTCTTA ATGAGGGAGATTGATGAGACAGGCAGTAGGGGGAGGGTTTGGGTTGACTACTCCTCGGGTATAATTGAGGATAAGCATGT TGAGGCGGAAAGGAGGGATGAGTACTTAATGAAGACTATTGGTTCAACGGGCCAGGGGGTTGGGGCAGCCATGGTGGATA GGGTTCTTAGGAGACTTAAGTTGGCTAGGGATTTCGAGGAGTTAAGGGGCATGTTAATTGATGTGCCAAGGGAGGTTAAT GAATCACTGGAGAGGGGTAGGCTTGTGATTATTGAGGGTACTCAGGGAACATTCCTAAGCCTATACCATGGCACGTACCC ATACGTCACAAGTAGGGACACCACTGCTTCAGGTATTATTAGTGAGGTTGGTGTTAGCCCAAGGAGTGTGAGTGATATTA TATTAATCTTTAAGGCATTCGTAAGTAGGGTTGGTGCAGGGGAATTACCTGGTGAGTTAAAGCCTGAGGAGGCGGAGGCT AGGGGTTGGGTTGAGAAGGGTACTGTGACCGGTAGGTTAAGGAGGGTTGCACCGTTTAACATTGATTTAGCTAAGAGGGC TGTAATGCTGAATAAACCCACTCAAATAGCCATAACTAAACTCGACGCATTATTCCCTGAGGCGAGGGGGAGGAGGAAGT GGGGGGAATTACCCACTGAGGCTAGGAAGTGGATAAACAATATTAGTGAAGAGTTGGGTGTGCCGGTTACGTTAATTGGA ACGGGGGAGGATGCGTTAGACATGGTTGATTTAAGGGGTGAGTCGCAGTGA
Upstream 100 bases:
>100_bases GGGGTTAATAAATCCTCCTAATCATTTAATTGATTAACTCAATAATGTGTTAATTATTAAACGAAAAACTTAAAAACATG CTGCATTATTTAATTAAAAA
Downstream 100 bases:
>100_bases CTTACGACATAGCGATAATTGGGGCTGGACCAGCGGGCTTATTTGCGGCGTATGAACTCACCAGGAATGCTGATGGATTA AGAATAGCATTAGTGGATAA
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MPLTVVVGGFFGDEGKGKVISYLSLVDKPDICVRTGSINAGHTVNLRDRTWKVRIIPSCFPNEETRLMIAPGALFSISVL MREIDETGSRGRVWVDYSSGIIEDKHVEAERRDEYLMKTIGSTGQGVGAAMVDRVLRRLKLARDFEELRGMLIDVPREVN ESLERGRLVIIEGTQGTFLSLYHGTYPYVTSRDTTASGIISEVGVSPRSVSDIILIFKAFVSRVGAGELPGELKPEEAEA RGWVEKGTVTGRLRRVAPFNIDLAKRAVMLNKPTQIAITKLDALFPEARGRRKWGELPTEARKWINNISEELGVPVTLIG TGEDALDMVDLRGESQ
Sequences:
>Translated_336_residues MPLTVVVGGFFGDEGKGKVISYLSLVDKPDICVRTGSINAGHTVNLRDRTWKVRIIPSCFPNEETRLMIAPGALFSISVL MREIDETGSRGRVWVDYSSGIIEDKHVEAERRDEYLMKTIGSTGQGVGAAMVDRVLRRLKLARDFEELRGMLIDVPREVN ESLERGRLVIIEGTQGTFLSLYHGTYPYVTSRDTTASGIISEVGVSPRSVSDIILIFKAFVSRVGAGELPGELKPEEAEA RGWVEKGTVTGRLRRVAPFNIDLAKRAVMLNKPTQIAITKLDALFPEARGRRKWGELPTEARKWINNISEELGVPVTLIG TGEDALDMVDLRGESQ >Mature_335_residues PLTVVVGGFFGDEGKGKVISYLSLVDKPDICVRTGSINAGHTVNLRDRTWKVRIIPSCFPNEETRLMIAPGALFSISVLM REIDETGSRGRVWVDYSSGIIEDKHVEAERRDEYLMKTIGSTGQGVGAAMVDRVLRRLKLARDFEELRGMLIDVPREVNE SLERGRLVIIEGTQGTFLSLYHGTYPYVTSRDTTASGIISEVGVSPRSVSDIILIFKAFVSRVGAGELPGELKPEEAEAR GWVEKGTVTGRLRRVAPFNIDLAKRAVMLNKPTQIAITKLDALFPEARGRRKWGELPTEARKWINNISEELGVPVTLIGT GEDALDMVDLRGESQ
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI34577063, Length=428, Percent_Identity=26.6355140186916, Blast_Score=131, Evalue=9e-31, Organism=Homo sapiens, GI22748717, Length=426, Percent_Identity=25.3521126760563, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI40316944, Length=393, Percent_Identity=23.6641221374046, Blast_Score=105, Evalue=4e-23, Organism=Escherichia coli, GI1790620, Length=424, Percent_Identity=30.6603773584906, Blast_Score=160, Evalue=1e-40, Organism=Caenorhabditis elegans, GI25146553, Length=418, Percent_Identity=26.7942583732057, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI25146555, Length=418, Percent_Identity=26.7942583732057, Blast_Score=142, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6324109, Length=422, Percent_Identity=26.303317535545, Blast_Score=132, Evalue=1e-31, Organism=Drosophila melanogaster, GI21356033, Length=422, Percent_Identity=25.3554502369668, Blast_Score=123, Evalue=1e-28,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 37140; Mature: 37009
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTVVVGGFFGDEGKGKVISYLSLVDKPDICVRTGSINAGHTVNLRDRTWKVRIIPSCF CCEEEEEECEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCEEEEEECCCCC PNEETRLMIAPGALFSISVLMREIDETGSRGRVWVDYSSGIIEDKHVEAERRDEYLMKTI CCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHCCHHHHHHHHHHHH GSTGQGVGAAMVDRVLRRLKLARDFEELRGMLIDVPREVNESLERGRLVIIEGTQGTFLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCEEEEECCCCCEEE LYHGTYPYVTSRDTTASGIISEVGVSPRSVSDIILIFKAFVSRVGAGELPGELKPEEAEA EECCCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH RGWVEKGTVTGRLRRVAPFNIDLAKRAVMLNKPTQIAITKLDALFPEARGRRKWGELPTE CCCHHCCCHHHHEEEECCCCCHHHHHHHEECCCCEEEEEHHHHHCCHHCCCCCCCCCCHH ARKWINNISEELGVPVTLIGTGEDALDMVDLRGESQ HHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCCC >Mature Secondary Structure PLTVVVGGFFGDEGKGKVISYLSLVDKPDICVRTGSINAGHTVNLRDRTWKVRIIPSCF CEEEEEECEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCEEEEEECCCCC PNEETRLMIAPGALFSISVLMREIDETGSRGRVWVDYSSGIIEDKHVEAERRDEYLMKTI CCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHCCHHHHHHHHHHHH GSTGQGVGAAMVDRVLRRLKLARDFEELRGMLIDVPREVNESLERGRLVIIEGTQGTFLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCEEEEECCCCCEEE LYHGTYPYVTSRDTTASGIISEVGVSPRSVSDIILIFKAFVSRVGAGELPGELKPEEAEA EECCCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH RGWVEKGTVTGRLRRVAPFNIDLAKRAVMLNKPTQIAITKLDALFPEARGRRKWGELPTE CCCHHCCCHHHHEEEECCCCCHHHHHHHEECCCCEEEEEHHHHHCCHHCCCCCCCCCCHH ARKWINNISEELGVPVTLIGTGEDALDMVDLRGESQ HHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]