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The map label for this gene is rpl19e [H]

Identifier: 159040603

GI number: 159040603

Start: 24331

End: 24807

Strand: Reverse

Name: rpl19e [H]

Synonym: Cmaq_0011

Alternate gene names: 159040603

Gene position: 24807-24331 (Counterclockwise)

Preceding gene: 159040604

Following gene: 159040602

Centisome position: 1.19

GC content: 46.96

Gene sequence:

>477_bases
GTGGATTTAAGGGAAACAGTGGCTAGATTACTTAACGTCCCCAAGTCAAGGATTGTGATTAAGCAGGAAGCCCTTGAGCA
GCTTGAGGAGGCTATAACTAGGAATGATGTGAGAAGCCTAATGAAGGAGGGGTTAATTGAGGTTAAACCAAGGAAGCGTA
ATAGTAGGGGTAGGTGGAGGATTACCCATGAGAAGAGGAAGAGCGGTAGAAGGAGGGGTAGGGGAAGTAGAAGGGGTACT
AGGAAGGCTAGGGGTGCTGTTGGTAAGGAGGTTTGGGTACCTAGGATTAGGAGGATTAGGAGATTCCTAAACACACTGAA
GCATAGGGGTGTTATTGATAAGGCCACTTGGAGGAACCTATACAGGATGGCTAAGGGAGGCTACTTCGAGTCACTGGCTC
ACTTGAGAACATACATGATTCAGAATGGAATCGTCACTGAGGATAAGATTAAGGCAGCCTTCAAGGGTGGTTCCTAA

Upstream 100 bases:

>100_bases
AGGAAGAGGATTGAGATAATTAGGGAGGCTGTTAGGAGGGGTATTAAGGTGCTTAACGTTGATAAGAGGACTAGGGAAGC
CATAAGGGAGGTGACCTGAA

Downstream 100 bases:

>100_bases
TGGCAAGCAGCGGTAGGTATAAGGTTAAGTTCAGGAGGAGGAGGGAGGGTAAGACTGATTACTATAAGAGGAGGATCATG
GTAATAAGCGGTAAACCAAG

Product: 50S ribosomal protein L19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MDLRETVARLLNVPKSRIVIKQEALEQLEEAITRNDVRSLMKEGLIEVKPRKRNSRGRWRITHEKRKSGRRRGRGSRRGT
RKARGAVGKEVWVPRIRRIRRFLNTLKHRGVIDKATWRNLYRMAKGGYFESLAHLRTYMIQNGIVTEDKIKAAFKGGS

Sequences:

>Translated_158_residues
MDLRETVARLLNVPKSRIVIKQEALEQLEEAITRNDVRSLMKEGLIEVKPRKRNSRGRWRITHEKRKSGRRRGRGSRRGT
RKARGAVGKEVWVPRIRRIRRFLNTLKHRGVIDKATWRNLYRMAKGGYFESLAHLRTYMIQNGIVTEDKIKAAFKGGS
>Mature_158_residues
MDLRETVARLLNVPKSRIVIKQEALEQLEEAITRNDVRSLMKEGLIEVKPRKRNSRGRWRITHEKRKSGRRRGRGSRRGT
RKARGAVGKEVWVPRIRRIRRFLNTLKHRGVIDKATWRNLYRMAKGGYFESLAHLRTYMIQNGIVTEDKIKAAFKGGS

Specific function: Unknown

COG id: COG2147

COG function: function code J; Ribosomal protein L19E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L19e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000196
- InterPro:   IPR015972
- InterPro:   IPR015973
- InterPro:   IPR015974 [H]

Pfam domain/function: PF01280 Ribosomal_L19e [H]

EC number: NA

Molecular weight: Translated: 18503; Mature: 18503

Theoretical pI: Translated: 12.22; Mature: 12.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRETVARLLNVPKSRIVIKQEALEQLEEAITRNDVRSLMKEGLIEVKPRKRNSRGRWR
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEE
ITHEKRKSGRRRGRGSRRGTRKARGAVGKEVWVPRIRRIRRFLNTLKHRGVIDKATWRNL
ECHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
YRMAKGGYFESLAHLRTYMIQNGIVTEDKIKAAFKGGS
HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MDLRETVARLLNVPKSRIVIKQEALEQLEEAITRNDVRSLMKEGLIEVKPRKRNSRGRWR
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEE
ITHEKRKSGRRRGRGSRRGTRKARGAVGKEVWVPRIRRIRRFLNTLKHRGVIDKATWRNL
ECHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
YRMAKGGYFESLAHLRTYMIQNGIVTEDKIKAAFKGGS
HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]