Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is 158425644

Identifier: 158425644

GI number: 158425644

Start: 4589425

End: 4590549

Strand: Reverse

Name: 158425644

Synonym: AZC_4020

Alternate gene names: NA

Gene position: 4590549-4589425 (Counterclockwise)

Preceding gene: 158425650

Following gene: 158425641

Centisome position: 85.49

GC content: 68.18

Gene sequence:

>1125_bases
ATGGAAGCGGAGCCGCGCGTGGGCGAACAGTATAAAGCAGGCATTCTCCCGGCGCAGGCCATTGCGGCGCTTGTGGAAAG
CGGCGGCATCTCCACGCGGCGCGCGCTCGATGACGACCAGATCCAGCCGGCGAGCCTGGACCTGCGTCTCGGTCGCACCG
CCTGGCGCATCCGCGCCAGCTTCCTGCCCGGCGCCGGCAATACGGTGAAGGACCGCCTGTCGGAGCTTGTGCTGCACAAG
CTCGACCTTTCGGACGGTGCGGTGCTGGAGACGGGGGGCGTCTATCTCGTTCCTCTTTTCGAACGGCTCCGCTTGCCCAT
CGACGTGGCGGCGTCCACCAATCCGAAAAGCTCCACCGGCCGGCTTGATGTCTTCACCCGCGTCATCGCGGATGGGGCAC
GGGCCTTCGATGCCATTCCCATGGGCTATGCCGGCCCGCTGTATCTGGAAATCGCGCCGCGCACCTTCCCCATCCTCGTG
CGCACCGGGTCGCGCCTCTCTCAGGTGCGCTTCCGGCGCGGCGTGGCCCGGCTCTCCGATCTTGAACTGCTGAACCTCCA
GCAGGAACAGCGGCTCGTCGATTCCGACGCGCCCGACGTCGCCGGGGGCGGCATCGCGCTGGGTGTCGATCTCGCCGGCG
CTGCGTGGAACGGCATCCTCGGCTTCCGGGCCAAGAAGCACACCGGCGTCGTGGACGTGGACAAGCGCGCCGCGCTCGAC
GTGGAGGACTTCTGGGAGCCCATCCGCGCGCGCGGCCATTCCTCGCTCGTGCTTGATCCGGACGCCTTCTACATCCTCGC
CTCCCGCGAAGCGGTGCAGGTGCCGCCCGAGCACGCGGCGGAGATGGTGCCCTTCGATCCGCTCGTGGGCGAGTTCCGTG
TGCATTACGCGGGCTTCTTCGATCCCGGCTTCGGCCATCCGGCCGCGGGCGGCAGCGGCGCGCGGGCGGTGCTGGAAGTG
CGCTCGCGCGAGGTGCCCTTCATCCTTGAACATGGCCAGACCGTGGGCCGGTTGGTCTATGAGCGCATGGCGGCGCGGCC
GGACCATCTTTATGGCGAGGCGCTCGGTTCCAATTATCAGGGGCAGGGCCTGAAGCTCTCCAAGCACTTCCGCCCCTTCG
CCTGA

Upstream 100 bases:

>100_bases
GTGGCAGCAAGCCGGCCGGCTCAAATTCTCCACGAGCCGGGGCAGTTAACGCCGTGGGCCGCTTGGCGTCAAGCCGAGCG
TCCGTTAAAACGAACGATAG

Downstream 100 bases:

>100_bases
GGCGGCTCAGCTCTCCGCGGTCTCCGGCCGTTCCGCCTTGGCCGGTTCGGCCTCGGTGGAAGGCGTGGGGGAGGCGACGC
GCCGGTCCAGCACGCTCTGG

Product: 2'-deoxycytidine 5'-triphosphate deaminase

Products: dUTP; NH3

Alternate protein names: 2-Deoxycytidine 5-Triphosphate Deaminase; 2-Deoxycytidine 5'-Triphosphate Deaminase Superfamily; 2`-Deoxycytidine 5`-Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MEAEPRVGEQYKAGILPAQAIAALVESGGISTRRALDDDQIQPASLDLRLGRTAWRIRASFLPGAGNTVKDRLSELVLHK
LDLSDGAVLETGGVYLVPLFERLRLPIDVAASTNPKSSTGRLDVFTRVIADGARAFDAIPMGYAGPLYLEIAPRTFPILV
RTGSRLSQVRFRRGVARLSDLELLNLQQEQRLVDSDAPDVAGGGIALGVDLAGAAWNGILGFRAKKHTGVVDVDKRAALD
VEDFWEPIRARGHSSLVLDPDAFYILASREAVQVPPEHAAEMVPFDPLVGEFRVHYAGFFDPGFGHPAAGGSGARAVLEV
RSREVPFILEHGQTVGRLVYERMAARPDHLYGEALGSNYQGQGLKLSKHFRPFA

Sequences:

>Translated_374_residues
MEAEPRVGEQYKAGILPAQAIAALVESGGISTRRALDDDQIQPASLDLRLGRTAWRIRASFLPGAGNTVKDRLSELVLHK
LDLSDGAVLETGGVYLVPLFERLRLPIDVAASTNPKSSTGRLDVFTRVIADGARAFDAIPMGYAGPLYLEIAPRTFPILV
RTGSRLSQVRFRRGVARLSDLELLNLQQEQRLVDSDAPDVAGGGIALGVDLAGAAWNGILGFRAKKHTGVVDVDKRAALD
VEDFWEPIRARGHSSLVLDPDAFYILASREAVQVPPEHAAEMVPFDPLVGEFRVHYAGFFDPGFGHPAAGGSGARAVLEV
RSREVPFILEHGQTVGRLVYERMAARPDHLYGEALGSNYQGQGLKLSKHFRPFA
>Mature_374_residues
MEAEPRVGEQYKAGILPAQAIAALVESGGISTRRALDDDQIQPASLDLRLGRTAWRIRASFLPGAGNTVKDRLSELVLHK
LDLSDGAVLETGGVYLVPLFERLRLPIDVAASTNPKSSTGRLDVFTRVIADGARAFDAIPMGYAGPLYLEIAPRTFPILV
RTGSRLSQVRFRRGVARLSDLELLNLQQEQRLVDSDAPDVAGGGIALGVDLAGAAWNGILGFRAKKHTGVVDVDKRAALD
VEDFWEPIRARGHSSLVLDPDAFYILASREAVQVPPEHAAEMVPFDPLVGEFRVHYAGFFDPGFGHPAAGGSGARAVLEV
RSREVPFILEHGQTVGRLVYERMAARPDHLYGEALGSNYQGQGLKLSKHFRPFA

Specific function: Unknown

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.4.13

Molecular weight: Translated: 40558; Mature: 40558

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAEPRVGEQYKAGILPAQAIAALVESGGISTRRALDDDQIQPASLDLRLGRTAWRIRAS
CCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEECCEEEEEEEE
FLPGAGNTVKDRLSELVLHKLDLSDGAVLETGGVYLVPLFERLRLPIDVAASTNPKSSTG
ECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEHHHHHCCCEEEECCCCCCCCCC
RLDVFTRVIADGARAFDAIPMGYAGPLYLEIAPRTFPILVRTGSRLSQVRFRRGVARLSD
HHHHHHHHHHCCHHHHHCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHC
LELLNLQQEQRLVDSDAPDVAGGGIALGVDLAGAAWNGILGFRAKKHTGVVDVDKRAALD
HHHHCCHHHHHHHCCCCCCCCCCCEEEEEEECCHHHCCHHCCCCCCCCCCEECCCHHCCC
VEDFWEPIRARGHSSLVLDPDAFYILASREAVQVPPEHAAEMVPFDPLVGEFRVHYAGFF
HHHHHHHHHHCCCCCEEECCCEEEEEECCCEEECCHHHHHHCCCCCCCCCCEEEEEEEEC
DPGFGHPAAGGSGARAVLEVRSREVPFILEHGQTVGRLVYERMAARPDHLYGEALGSNYQ
CCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHCCCCC
GQGLKLSKHFRPFA
CCCEEECCCCCCCC
>Mature Secondary Structure
MEAEPRVGEQYKAGILPAQAIAALVESGGISTRRALDDDQIQPASLDLRLGRTAWRIRAS
CCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEECCEEEEEEEE
FLPGAGNTVKDRLSELVLHKLDLSDGAVLETGGVYLVPLFERLRLPIDVAASTNPKSSTG
ECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEHHHHHCCCEEEECCCCCCCCCC
RLDVFTRVIADGARAFDAIPMGYAGPLYLEIAPRTFPILVRTGSRLSQVRFRRGVARLSD
HHHHHHHHHHCCHHHHHCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHC
LELLNLQQEQRLVDSDAPDVAGGGIALGVDLAGAAWNGILGFRAKKHTGVVDVDKRAALD
HHHHCCHHHHHHHCCCCCCCCCCCEEEEEEECCHHHCCHHCCCCCCCCCCEECCCHHCCC
VEDFWEPIRARGHSSLVLDPDAFYILASREAVQVPPEHAAEMVPFDPLVGEFRVHYAGFF
HHHHHHHHHHCCCCCEEECCCEEEEEECCCEEECCHHHHHHCCCCCCCCCCEEEEEEEEC
DPGFGHPAAGGSGARAVLEVRSREVPFILEHGQTVGRLVYERMAARPDHLYGEALGSNYQ
CCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHCCCCC
GQGLKLSKHFRPFA
CCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: dCTP; H2O

Specific reaction: dCTP + H2O = dUTP + NH3

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA