| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425644
Identifier: 158425644
GI number: 158425644
Start: 4589425
End: 4590549
Strand: Reverse
Name: 158425644
Synonym: AZC_4020
Alternate gene names: NA
Gene position: 4590549-4589425 (Counterclockwise)
Preceding gene: 158425650
Following gene: 158425641
Centisome position: 85.49
GC content: 68.18
Gene sequence:
>1125_bases ATGGAAGCGGAGCCGCGCGTGGGCGAACAGTATAAAGCAGGCATTCTCCCGGCGCAGGCCATTGCGGCGCTTGTGGAAAG CGGCGGCATCTCCACGCGGCGCGCGCTCGATGACGACCAGATCCAGCCGGCGAGCCTGGACCTGCGTCTCGGTCGCACCG CCTGGCGCATCCGCGCCAGCTTCCTGCCCGGCGCCGGCAATACGGTGAAGGACCGCCTGTCGGAGCTTGTGCTGCACAAG CTCGACCTTTCGGACGGTGCGGTGCTGGAGACGGGGGGCGTCTATCTCGTTCCTCTTTTCGAACGGCTCCGCTTGCCCAT CGACGTGGCGGCGTCCACCAATCCGAAAAGCTCCACCGGCCGGCTTGATGTCTTCACCCGCGTCATCGCGGATGGGGCAC GGGCCTTCGATGCCATTCCCATGGGCTATGCCGGCCCGCTGTATCTGGAAATCGCGCCGCGCACCTTCCCCATCCTCGTG CGCACCGGGTCGCGCCTCTCTCAGGTGCGCTTCCGGCGCGGCGTGGCCCGGCTCTCCGATCTTGAACTGCTGAACCTCCA GCAGGAACAGCGGCTCGTCGATTCCGACGCGCCCGACGTCGCCGGGGGCGGCATCGCGCTGGGTGTCGATCTCGCCGGCG CTGCGTGGAACGGCATCCTCGGCTTCCGGGCCAAGAAGCACACCGGCGTCGTGGACGTGGACAAGCGCGCCGCGCTCGAC GTGGAGGACTTCTGGGAGCCCATCCGCGCGCGCGGCCATTCCTCGCTCGTGCTTGATCCGGACGCCTTCTACATCCTCGC CTCCCGCGAAGCGGTGCAGGTGCCGCCCGAGCACGCGGCGGAGATGGTGCCCTTCGATCCGCTCGTGGGCGAGTTCCGTG TGCATTACGCGGGCTTCTTCGATCCCGGCTTCGGCCATCCGGCCGCGGGCGGCAGCGGCGCGCGGGCGGTGCTGGAAGTG CGCTCGCGCGAGGTGCCCTTCATCCTTGAACATGGCCAGACCGTGGGCCGGTTGGTCTATGAGCGCATGGCGGCGCGGCC GGACCATCTTTATGGCGAGGCGCTCGGTTCCAATTATCAGGGGCAGGGCCTGAAGCTCTCCAAGCACTTCCGCCCCTTCG CCTGA
Upstream 100 bases:
>100_bases GTGGCAGCAAGCCGGCCGGCTCAAATTCTCCACGAGCCGGGGCAGTTAACGCCGTGGGCCGCTTGGCGTCAAGCCGAGCG TCCGTTAAAACGAACGATAG
Downstream 100 bases:
>100_bases GGCGGCTCAGCTCTCCGCGGTCTCCGGCCGTTCCGCCTTGGCCGGTTCGGCCTCGGTGGAAGGCGTGGGGGAGGCGACGC GCCGGTCCAGCACGCTCTGG
Product: 2'-deoxycytidine 5'-triphosphate deaminase
Products: dUTP; NH3
Alternate protein names: 2-Deoxycytidine 5-Triphosphate Deaminase; 2-Deoxycytidine 5'-Triphosphate Deaminase Superfamily; 2`-Deoxycytidine 5`-Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MEAEPRVGEQYKAGILPAQAIAALVESGGISTRRALDDDQIQPASLDLRLGRTAWRIRASFLPGAGNTVKDRLSELVLHK LDLSDGAVLETGGVYLVPLFERLRLPIDVAASTNPKSSTGRLDVFTRVIADGARAFDAIPMGYAGPLYLEIAPRTFPILV RTGSRLSQVRFRRGVARLSDLELLNLQQEQRLVDSDAPDVAGGGIALGVDLAGAAWNGILGFRAKKHTGVVDVDKRAALD VEDFWEPIRARGHSSLVLDPDAFYILASREAVQVPPEHAAEMVPFDPLVGEFRVHYAGFFDPGFGHPAAGGSGARAVLEV RSREVPFILEHGQTVGRLVYERMAARPDHLYGEALGSNYQGQGLKLSKHFRPFA
Sequences:
>Translated_374_residues MEAEPRVGEQYKAGILPAQAIAALVESGGISTRRALDDDQIQPASLDLRLGRTAWRIRASFLPGAGNTVKDRLSELVLHK LDLSDGAVLETGGVYLVPLFERLRLPIDVAASTNPKSSTGRLDVFTRVIADGARAFDAIPMGYAGPLYLEIAPRTFPILV RTGSRLSQVRFRRGVARLSDLELLNLQQEQRLVDSDAPDVAGGGIALGVDLAGAAWNGILGFRAKKHTGVVDVDKRAALD VEDFWEPIRARGHSSLVLDPDAFYILASREAVQVPPEHAAEMVPFDPLVGEFRVHYAGFFDPGFGHPAAGGSGARAVLEV RSREVPFILEHGQTVGRLVYERMAARPDHLYGEALGSNYQGQGLKLSKHFRPFA >Mature_374_residues MEAEPRVGEQYKAGILPAQAIAALVESGGISTRRALDDDQIQPASLDLRLGRTAWRIRASFLPGAGNTVKDRLSELVLHK LDLSDGAVLETGGVYLVPLFERLRLPIDVAASTNPKSSTGRLDVFTRVIADGARAFDAIPMGYAGPLYLEIAPRTFPILV RTGSRLSQVRFRRGVARLSDLELLNLQQEQRLVDSDAPDVAGGGIALGVDLAGAAWNGILGFRAKKHTGVVDVDKRAALD VEDFWEPIRARGHSSLVLDPDAFYILASREAVQVPPEHAAEMVPFDPLVGEFRVHYAGFFDPGFGHPAAGGSGARAVLEV RSREVPFILEHGQTVGRLVYERMAARPDHLYGEALGSNYQGQGLKLSKHFRPFA
Specific function: Unknown
COG id: COG0717
COG function: function code F; Deoxycytidine deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.4.13
Molecular weight: Translated: 40558; Mature: 40558
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAEPRVGEQYKAGILPAQAIAALVESGGISTRRALDDDQIQPASLDLRLGRTAWRIRAS CCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEECCEEEEEEEE FLPGAGNTVKDRLSELVLHKLDLSDGAVLETGGVYLVPLFERLRLPIDVAASTNPKSSTG ECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEHHHHHCCCEEEECCCCCCCCCC RLDVFTRVIADGARAFDAIPMGYAGPLYLEIAPRTFPILVRTGSRLSQVRFRRGVARLSD HHHHHHHHHHCCHHHHHCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHC LELLNLQQEQRLVDSDAPDVAGGGIALGVDLAGAAWNGILGFRAKKHTGVVDVDKRAALD HHHHCCHHHHHHHCCCCCCCCCCCEEEEEEECCHHHCCHHCCCCCCCCCCEECCCHHCCC VEDFWEPIRARGHSSLVLDPDAFYILASREAVQVPPEHAAEMVPFDPLVGEFRVHYAGFF HHHHHHHHHHCCCCCEEECCCEEEEEECCCEEECCHHHHHHCCCCCCCCCCEEEEEEEEC DPGFGHPAAGGSGARAVLEVRSREVPFILEHGQTVGRLVYERMAARPDHLYGEALGSNYQ CCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHCCCCC GQGLKLSKHFRPFA CCCEEECCCCCCCC >Mature Secondary Structure MEAEPRVGEQYKAGILPAQAIAALVESGGISTRRALDDDQIQPASLDLRLGRTAWRIRAS CCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEECCEEEEEEEE FLPGAGNTVKDRLSELVLHKLDLSDGAVLETGGVYLVPLFERLRLPIDVAASTNPKSSTG ECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEHHHHHCCCEEEECCCCCCCCCC RLDVFTRVIADGARAFDAIPMGYAGPLYLEIAPRTFPILVRTGSRLSQVRFRRGVARLSD HHHHHHHHHHCCHHHHHCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHC LELLNLQQEQRLVDSDAPDVAGGGIALGVDLAGAAWNGILGFRAKKHTGVVDVDKRAALD HHHHCCHHHHHHHCCCCCCCCCCCEEEEEEECCHHHCCHHCCCCCCCCCCEECCCHHCCC VEDFWEPIRARGHSSLVLDPDAFYILASREAVQVPPEHAAEMVPFDPLVGEFRVHYAGFF HHHHHHHHHHCCCCCEEECCCEEEEEECCCEEECCHHHHHHCCCCCCCCCCEEEEEEEEC DPGFGHPAAGGSGARAVLEVRSREVPFILEHGQTVGRLVYERMAARPDHLYGEALGSNYQ CCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHCCCCC GQGLKLSKHFRPFA CCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dCTP; H2O
Specific reaction: dCTP + H2O = dUTP + NH3
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA