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The map label for this gene is yisS [H]

Identifier: 158425584

GI number: 158425584

Start: 4526026

End: 4527015

Strand: Reverse

Name: yisS [H]

Synonym: AZC_3960

Alternate gene names: 158425584

Gene position: 4527015-4526026 (Counterclockwise)

Preceding gene: 158425585

Following gene: 158425583

Centisome position: 84.31

GC content: 68.48

Gene sequence:

>990_bases
ATGGCTCGTGATTCGGCGGCCTCCGTGGCGCGTCCCCTTCGCGTCGGCGTCACCGGCATTGGCATCATGGGCTCCAACCA
CGCCCGCGTTCTGGCGGAACTGCCAGGTGCGGAGCTGGTGGCGGTGGCCGATCCGGACACGGCGCAGGCCGGCCGCGTGG
CCGAGGTGCTCGGCTGTCAGGCGGTGAGCGATCATCACGGTCTGCTGGAACTGGGTCTCGATGCGGTGATCGTCGCCGCC
CCGACCCATCTCCACCATTCCGTGGCGCTCGATGTCATCAATGCCGGCTGCTCGGTGCTGGTGGAAAAGCCGGTGGCCTC
CACCGTGGAGCAGGGGCGCGAGATCGTTGCCGCCGCCAGGGCCAAGGGCGTGACGCTCATGGTCGGCCATGTGGAGCGCT
TCAATCCCGCCGTGCAGGCGGTGAAGAAGGCCATCGAGGGCGAGGAACTCCTCTCCATCGCCATCACCCGCGTCGGTCCG
TTCCCGCCGCGCATGTCGAACGTGGGCGTGGTCATCGACCTCGCCGTGCATGACATCGACCTCATCCGCTGGTTCACCGG
CTCGGACATCGTCGAGGTGCAGCCGCAGACCTCCAGCGCCATGGCCGAGCGCGAGGACATCGCGTTGCTCCAGTTCCGCA
CCGCCTCCGGCGTGCTGGCCCATATCAACACCAACTGGCTGACGCCCTTCAAGGCGCGCACGGTGCATGTGGCCACCCGC
AAGAAATACGTCATCGGTGACCTGCTGACCCGGCAGGTGACCGAGTGCTTCGACTATCGCCCGGACGGCTCCTATTCCAT
GCGCCATCTTCCCGTGGCCTATGCGGAGCCCCTGCGCACCGAACTCACGCACTTCCTCGATGCGGTCCGCACGGGCGGCA
CGCCGCCGGTGTCGGGCGAGGAGGGCGTTGCGAGCCTGGAGATCGCCATCTCCTGCCTCACCGAGCGGGTGGAGGCGGCC
GCCCGCGCCAAGGTGCGGCGCGCCGGCTGA

Upstream 100 bases:

>100_bases
CTTGAACGGCGAAACGTCGCGGAATTGATGTGGCGCCTCGCTTTGGCCCGCCCCCCCATGATAGGAGCGCAGCCGAAGTT
CAGTAGGCAAGAGGGCTGAA

Downstream 100 bases:

>100_bases
GGCCGGGCGCCTTCATACCAGACGCGGGGCCTTCGGCTCCGCTTGTCCATGCCGATCGCCCCGCGCCTCTGCGCGCGGCC
TGCCAGGAACGTGTGCCCAT

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MARDSAASVARPLRVGVTGIGIMGSNHARVLAELPGAELVAVADPDTAQAGRVAEVLGCQAVSDHHGLLELGLDAVIVAA
PTHLHHSVALDVINAGCSVLVEKPVASTVEQGREIVAAARAKGVTLMVGHVERFNPAVQAVKKAIEGEELLSIAITRVGP
FPPRMSNVGVVIDLAVHDIDLIRWFTGSDIVEVQPQTSSAMAEREDIALLQFRTASGVLAHINTNWLTPFKARTVHVATR
KKYVIGDLLTRQVTECFDYRPDGSYSMRHLPVAYAEPLRTELTHFLDAVRTGGTPPVSGEEGVASLEIAISCLTERVEAA
ARAKVRRAG

Sequences:

>Translated_329_residues
MARDSAASVARPLRVGVTGIGIMGSNHARVLAELPGAELVAVADPDTAQAGRVAEVLGCQAVSDHHGLLELGLDAVIVAA
PTHLHHSVALDVINAGCSVLVEKPVASTVEQGREIVAAARAKGVTLMVGHVERFNPAVQAVKKAIEGEELLSIAITRVGP
FPPRMSNVGVVIDLAVHDIDLIRWFTGSDIVEVQPQTSSAMAEREDIALLQFRTASGVLAHINTNWLTPFKARTVHVATR
KKYVIGDLLTRQVTECFDYRPDGSYSMRHLPVAYAEPLRTELTHFLDAVRTGGTPPVSGEEGVASLEIAISCLTERVEAA
ARAKVRRAG
>Mature_328_residues
ARDSAASVARPLRVGVTGIGIMGSNHARVLAELPGAELVAVADPDTAQAGRVAEVLGCQAVSDHHGLLELGLDAVIVAAP
THLHHSVALDVINAGCSVLVEKPVASTVEQGREIVAAARAKGVTLMVGHVERFNPAVQAVKKAIEGEELLSIAITRVGPF
PPRMSNVGVVIDLAVHDIDLIRWFTGSDIVEVQPQTSSAMAEREDIALLQFRTASGVLAHINTNWLTPFKARTVHVATRK
KYVIGDLLTRQVTECFDYRPDGSYSMRHLPVAYAEPLRTELTHFLDAVRTGGTPPVSGEEGVASLEIAISCLTERVEAAA
RAKVRRAG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=198, Percent_Identity=30.8080808080808, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87082405, Length=238, Percent_Identity=27.3109243697479, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35008; Mature: 34876

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDSAASVARPLRVGVTGIGIMGSNHARVLAELPGAELVAVADPDTAQAGRVAEVLGCQ
CCCCCHHHHHHHHEECEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHCCH
AVSDHHGLLELGLDAVIVAAPTHLHHSVALDVINAGCSVLVEKPVASTVEQGREIVAAAR
HHCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHH
AKGVTLMVGHVERFNPAVQAVKKAIEGEELLSIAITRVGPFPPRMSNVGVVIDLAVHDID
CCCEEEEECCHHHCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCEE
LIRWFTGSDIVEVQPQTSSAMAEREDIALLQFRTASGVLAHINTNWLTPFKARTVHVATR
EEEEECCCCEEEECCCCHHHHHHHCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEECC
KKYVIGDLLTRQVTECFDYRPDGSYSMRHLPVAYAEPLRTELTHFLDAVRTGGTPPVSGE
CHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EGVASLEIAISCLTERVEAAARAKVRRAG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARDSAASVARPLRVGVTGIGIMGSNHARVLAELPGAELVAVADPDTAQAGRVAEVLGCQ
CCCCHHHHHHHHEECEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHCCH
AVSDHHGLLELGLDAVIVAAPTHLHHSVALDVINAGCSVLVEKPVASTVEQGREIVAAAR
HHCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHH
AKGVTLMVGHVERFNPAVQAVKKAIEGEELLSIAITRVGPFPPRMSNVGVVIDLAVHDID
CCCEEEEECCHHHCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCEE
LIRWFTGSDIVEVQPQTSSAMAEREDIALLQFRTASGVLAHINTNWLTPFKARTVHVATR
EEEEECCCCEEEECCCCHHHHHHHCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEECC
KKYVIGDLLTRQVTECFDYRPDGSYSMRHLPVAYAEPLRTELTHFLDAVRTGGTPPVSGE
CHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EGVASLEIAISCLTERVEAAARAKVRRAG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]