| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is cmk
Identifier: 158425556
GI number: 158425556
Start: 4495043
End: 4495663
Strand: Direct
Name: cmk
Synonym: AZC_3932
Alternate gene names: 158425556
Gene position: 4495043-4495663 (Clockwise)
Preceding gene: 158425555
Following gene: 158425557
Centisome position: 83.71
GC content: 72.14
Gene sequence:
>621_bases ATGATCATCGCCATCGATGGCCCCGCAGCCTCCGGCAAGGGCACGCTGGGCAAGCGCATCGCCGGGCATCTGGGCCTCGC CCATCTCGACACCGGCCTGCTCTATCGCGCCGTCGGCGCCGCCTGCCTCGCTGCGGGCAAGCTCGACGACGAGGCCGCCT CCGTGGAAGCAGCCCGCACGCTCGATGTGACGACGCTCGATCCCGAAAGCCTGCGCACCGGCGCCATTGGGGAGGCGGCC TCCGTGGTCGCCGCCCGGCCCGGCGTGCGCGCGGCCCTCGTCGACCTCCAGCGGCGCTTCGCCGCCCGGCCGGAAGGCGC GGTGCTGGACGGGCGCGACATCGGCTCCGTCATCTGCCCCGATGCCACGGTGAAGCTCTTCGTCACCGCCTCGCCCGAGG TTCGCGCAGAGCGGCGCTTCAAGGAACTCGCCGCCCGCGATCCCCTCGCCTCCTATGAAGCGGTGCTCGCCGACATTCAC AAGCGTGACGAACGCGACAGCAACCGCGCCGCCGCCCCGCTGGTGATGGCAAGCGATGCGGTGCTGCTCGACACCTCACA CCTCGGCATCGAGGAGAGCTTCGCGGCGGCCCTCGCCATCGTGGAGCGGGCGCGGGGGTGA
Upstream 100 bases:
>100_bases GGGGTGAAGGTGGATGACGTGAGCTTCATCGCCACCTCCTTCCCCACCTTCATGCCCATGATAGCCGGCCTCGGCGCCAT CATCGCGTGATGGGGCGGCC
Downstream 100 bases:
>100_bases GGGGCAGGGAGGCTGAAGGCACCTCCTTGATCGCCCTATAGCAACATCTCCCTCTTCGGGCCGTCGTGGCCGGGCTTGTC CCGGCCAAGACAACCCGCTG
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MIIAIDGPAASGKGTLGKRIAGHLGLAHLDTGLLYRAVGAACLAAGKLDDEAASVEAARTLDVTTLDPESLRTGAIGEAA SVVAARPGVRAALVDLQRRFAARPEGAVLDGRDIGSVICPDATVKLFVTASPEVRAERRFKELAARDPLASYEAVLADIH KRDERDSNRAAAPLVMASDAVLLDTSHLGIEESFAAALAIVERARG
Sequences:
>Translated_206_residues MIIAIDGPAASGKGTLGKRIAGHLGLAHLDTGLLYRAVGAACLAAGKLDDEAASVEAARTLDVTTLDPESLRTGAIGEAA SVVAARPGVRAALVDLQRRFAARPEGAVLDGRDIGSVICPDATVKLFVTASPEVRAERRFKELAARDPLASYEAVLADIH KRDERDSNRAAAPLVMASDAVLLDTSHLGIEESFAAALAIVERARG >Mature_206_residues MIIAIDGPAASGKGTLGKRIAGHLGLAHLDTGLLYRAVGAACLAAGKLDDEAASVEAARTLDVTTLDPESLRTGAIGEAA SVVAARPGVRAALVDLQRRFAARPEGAVLDGRDIGSVICPDATVKLFVTASPEVRAERRFKELAARDPLASYEAVLADIH KRDERDSNRAAAPLVMASDAVLLDTSHLGIEESFAAALAIVERARG
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1787139, Length=212, Percent_Identity=43.3962264150943, Blast_Score=137, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KCY_AZOC5 (A8IKN6)
Other databases:
- EMBL: AP009384 - RefSeq: YP_001526848.1 - ProteinModelPortal: A8IKN6 - SMR: A8IKN6 - GeneID: 5687969 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_3932 - HOGENOM: HBG354377 - OMA: DIGTVIC - ProtClustDB: PRK00023 - BioCyc: ACAU438753:AZC_3932-MONOMER - GO: GO:0005737 - HAMAP: MF_00238 - InterPro: IPR003136 - InterPro: IPR011994 - PANTHER: PTHR21299:SF2 - TIGRFAMs: TIGR00017
Pfam domain/function: PF02224 Cytidylate_kin
EC number: =2.7.4.14
Molecular weight: Translated: 21370; Mature: 21370
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIAIDGPAASGKGTLGKRIAGHLGLAHLDTGLLYRAVGAACLAAGKLDDEAASVEAART CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHE LDVTTLDPESLRTGAIGEAASVVAARPGVRAALVDLQRRFAARPEGAVLDGRDIGSVICP EEEEECCHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCEECC DATVKLFVTASPEVRAERRFKELAARDPLASYEAVLADIHKRDERDSNRAAAPLVMASDA CCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCE VLLDTSHLGIEESFAAALAIVERARG EEEECCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIIAIDGPAASGKGTLGKRIAGHLGLAHLDTGLLYRAVGAACLAAGKLDDEAASVEAART CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHE LDVTTLDPESLRTGAIGEAASVVAARPGVRAALVDLQRRFAARPEGAVLDGRDIGSVICP EEEEECCHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCEECC DATVKLFVTASPEVRAERRFKELAARDPLASYEAVLADIHKRDERDSNRAAAPLVMASDA CCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCE VLLDTSHLGIEESFAAALAIVERARG EEEECCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA