Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is cmk

Identifier: 158425556

GI number: 158425556

Start: 4495043

End: 4495663

Strand: Direct

Name: cmk

Synonym: AZC_3932

Alternate gene names: 158425556

Gene position: 4495043-4495663 (Clockwise)

Preceding gene: 158425555

Following gene: 158425557

Centisome position: 83.71

GC content: 72.14

Gene sequence:

>621_bases
ATGATCATCGCCATCGATGGCCCCGCAGCCTCCGGCAAGGGCACGCTGGGCAAGCGCATCGCCGGGCATCTGGGCCTCGC
CCATCTCGACACCGGCCTGCTCTATCGCGCCGTCGGCGCCGCCTGCCTCGCTGCGGGCAAGCTCGACGACGAGGCCGCCT
CCGTGGAAGCAGCCCGCACGCTCGATGTGACGACGCTCGATCCCGAAAGCCTGCGCACCGGCGCCATTGGGGAGGCGGCC
TCCGTGGTCGCCGCCCGGCCCGGCGTGCGCGCGGCCCTCGTCGACCTCCAGCGGCGCTTCGCCGCCCGGCCGGAAGGCGC
GGTGCTGGACGGGCGCGACATCGGCTCCGTCATCTGCCCCGATGCCACGGTGAAGCTCTTCGTCACCGCCTCGCCCGAGG
TTCGCGCAGAGCGGCGCTTCAAGGAACTCGCCGCCCGCGATCCCCTCGCCTCCTATGAAGCGGTGCTCGCCGACATTCAC
AAGCGTGACGAACGCGACAGCAACCGCGCCGCCGCCCCGCTGGTGATGGCAAGCGATGCGGTGCTGCTCGACACCTCACA
CCTCGGCATCGAGGAGAGCTTCGCGGCGGCCCTCGCCATCGTGGAGCGGGCGCGGGGGTGA

Upstream 100 bases:

>100_bases
GGGGTGAAGGTGGATGACGTGAGCTTCATCGCCACCTCCTTCCCCACCTTCATGCCCATGATAGCCGGCCTCGGCGCCAT
CATCGCGTGATGGGGCGGCC

Downstream 100 bases:

>100_bases
GGGGCAGGGAGGCTGAAGGCACCTCCTTGATCGCCCTATAGCAACATCTCCCTCTTCGGGCCGTCGTGGCCGGGCTTGTC
CCGGCCAAGACAACCCGCTG

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MIIAIDGPAASGKGTLGKRIAGHLGLAHLDTGLLYRAVGAACLAAGKLDDEAASVEAARTLDVTTLDPESLRTGAIGEAA
SVVAARPGVRAALVDLQRRFAARPEGAVLDGRDIGSVICPDATVKLFVTASPEVRAERRFKELAARDPLASYEAVLADIH
KRDERDSNRAAAPLVMASDAVLLDTSHLGIEESFAAALAIVERARG

Sequences:

>Translated_206_residues
MIIAIDGPAASGKGTLGKRIAGHLGLAHLDTGLLYRAVGAACLAAGKLDDEAASVEAARTLDVTTLDPESLRTGAIGEAA
SVVAARPGVRAALVDLQRRFAARPEGAVLDGRDIGSVICPDATVKLFVTASPEVRAERRFKELAARDPLASYEAVLADIH
KRDERDSNRAAAPLVMASDAVLLDTSHLGIEESFAAALAIVERARG
>Mature_206_residues
MIIAIDGPAASGKGTLGKRIAGHLGLAHLDTGLLYRAVGAACLAAGKLDDEAASVEAARTLDVTTLDPESLRTGAIGEAA
SVVAARPGVRAALVDLQRRFAARPEGAVLDGRDIGSVICPDATVKLFVTASPEVRAERRFKELAARDPLASYEAVLADIH
KRDERDSNRAAAPLVMASDAVLLDTSHLGIEESFAAALAIVERARG

Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]

COG id: COG0283

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1787139, Length=212, Percent_Identity=43.3962264150943, Blast_Score=137, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KCY_AZOC5 (A8IKN6)

Other databases:

- EMBL:   AP009384
- RefSeq:   YP_001526848.1
- ProteinModelPortal:   A8IKN6
- SMR:   A8IKN6
- GeneID:   5687969
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_3932
- HOGENOM:   HBG354377
- OMA:   DIGTVIC
- ProtClustDB:   PRK00023
- BioCyc:   ACAU438753:AZC_3932-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00238
- InterPro:   IPR003136
- InterPro:   IPR011994
- PANTHER:   PTHR21299:SF2
- TIGRFAMs:   TIGR00017

Pfam domain/function: PF02224 Cytidylate_kin

EC number: =2.7.4.14

Molecular weight: Translated: 21370; Mature: 21370

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIAIDGPAASGKGTLGKRIAGHLGLAHLDTGLLYRAVGAACLAAGKLDDEAASVEAART
CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHE
LDVTTLDPESLRTGAIGEAASVVAARPGVRAALVDLQRRFAARPEGAVLDGRDIGSVICP
EEEEECCHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCEECC
DATVKLFVTASPEVRAERRFKELAARDPLASYEAVLADIHKRDERDSNRAAAPLVMASDA
CCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCE
VLLDTSHLGIEESFAAALAIVERARG
EEEECCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIIAIDGPAASGKGTLGKRIAGHLGLAHLDTGLLYRAVGAACLAAGKLDDEAASVEAART
CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHE
LDVTTLDPESLRTGAIGEAASVVAARPGVRAALVDLQRRFAARPEGAVLDGRDIGSVICP
EEEEECCHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCEECC
DATVKLFVTASPEVRAERRFKELAARDPLASYEAVLADIHKRDERDSNRAAAPLVMASDA
CCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCE
VLLDTSHLGIEESFAAALAIVERARG
EEEECCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA