| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425552
Identifier: 158425552
GI number: 158425552
Start: 4490868
End: 4491590
Strand: Reverse
Name: 158425552
Synonym: AZC_3928
Alternate gene names: NA
Gene position: 4491590-4490868 (Counterclockwise)
Preceding gene: 158425553
Following gene: 158425551
Centisome position: 83.65
GC content: 65.28
Gene sequence:
>723_bases ATGAACAGACACGTGCCGCCAGACGATTTCGAACGCCCGGATGTCGCGAGCTTCGCGGTGCGGGCTGCGCCGGACTTCCG CAAGGCGACGCGCCATAGCGCGCGCGTGCGGCTGGTGAAGCGCGTCCTGCCGGTGCTCATTGTGGTGGCGCTGGTGCTGA TGGTCAGCATTCCGCTGCTGCGCAATCTCACCATGACGATGGAGCTGCCGTTCGATCTCGGCCGCCTCAGCCTCTCGGGC ACCCGCCTTACCATGGAGGCGCCGAAGCTCTCCGGCTTCACCGACGACAACCGCGCCTACACCATCACCGCCGGTTCGGC GGTGCAGGATGTGACCAAGCCGGACCTCATCGGCCTCACCGATGTCTTCGCCAAGATGGAGCTGGCCAACAAGGGCTGGG CCACGGTGAAGTCGCGCACCGGCTCCCTCGATACCAAGACCCAGTTCATCACGCTCTCGGACGGTGTGGACCTCGCCACC AACAGCGGCTATGCCGGCCAGATGCAGGATGCGGGCGTGGACGTGAAGGCGGGAACCGTCACCACCGACCATCCGGTCGT GCTGACCTATATGGACGGACGGCTCGTTGCGGATAAGCTGCAGATCACCGATCGCGGTGGCCGCGCCTTCTTCGATGGCC ACGTCCAGCTCGATTTCCGCCTGTCCAGCCTGCCGAAGAGCGAGCCCGTCCCGCCCGCGCCAAAGCCGATTGTGAAGCAA TGA
Upstream 100 bases:
>100_bases ATCGCACTTGAGAAAGACTCCACGGTCGCGGGGGCGTGCGCGGCAGAGGGGTGGTCAGACCCACAGGGCGACGGCGGATG CCGGTGTCCCAGAGTGAGCC
Downstream 100 bases:
>100_bases CCTTCCTGTCCCTCCGCCTTGCGGCGGCCGCCTGCGTCCTTTCCCTCGCCGTGCCTGCGCTTGCGCAGCAGCCGGCCGCC AACAGCGGCCCACCGAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MNRHVPPDDFERPDVASFAVRAAPDFRKATRHSARVRLVKRVLPVLIVVALVLMVSIPLLRNLTMTMELPFDLGRLSLSG TRLTMEAPKLSGFTDDNRAYTITAGSAVQDVTKPDLIGLTDVFAKMELANKGWATVKSRTGSLDTKTQFITLSDGVDLAT NSGYAGQMQDAGVDVKAGTVTTDHPVVLTYMDGRLVADKLQITDRGGRAFFDGHVQLDFRLSSLPKSEPVPPAPKPIVKQ
Sequences:
>Translated_240_residues MNRHVPPDDFERPDVASFAVRAAPDFRKATRHSARVRLVKRVLPVLIVVALVLMVSIPLLRNLTMTMELPFDLGRLSLSG TRLTMEAPKLSGFTDDNRAYTITAGSAVQDVTKPDLIGLTDVFAKMELANKGWATVKSRTGSLDTKTQFITLSDGVDLAT NSGYAGQMQDAGVDVKAGTVTTDHPVVLTYMDGRLVADKLQITDRGGRAFFDGHVQLDFRLSSLPKSEPVPPAPKPIVKQ >Mature_240_residues MNRHVPPDDFERPDVASFAVRAAPDFRKATRHSARVRLVKRVLPVLIVVALVLMVSIPLLRNLTMTMELPFDLGRLSLSG TRLTMEAPKLSGFTDDNRAYTITAGSAVQDVTKPDLIGLTDVFAKMELANKGWATVKSRTGSLDTKTQFITLSDGVDLAT NSGYAGQMQDAGVDVKAGTVTTDHPVVLTYMDGRLVADKLQITDRGGRAFFDGHVQLDFRLSSLPKSEPVPPAPKPIVKQ
Specific function: Unknown
COG id: COG5375
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26130; Mature: 26130
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRHVPPDDFERPDVASFAVRAAPDFRKATRHSARVRLVKRVLPVLIVVALVLMVSIPLL CCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNLTMTMELPFDLGRLSLSGTRLTMEAPKLSGFTDDNRAYTITAGSAVQDVTKPDLIGLT HCCEEEEECCCCCCEEEECCCEEEEECCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCHH DVFAKMELANKGWATVKSRTGSLDTKTQFITLSDGVDLATNSGYAGQMQDAGVDVKAGTV HHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCEECCCCCCCCHHCCCCEEECCEE TTDHPVVLTYMDGRLVADKLQITDRGGRAFFDGHVQLDFRLSSLPKSEPVPPAPKPIVKQ ECCCCEEEEEECCEEEEEEEEEECCCCCEEEECEEEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRHVPPDDFERPDVASFAVRAAPDFRKATRHSARVRLVKRVLPVLIVVALVLMVSIPLL CCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNLTMTMELPFDLGRLSLSGTRLTMEAPKLSGFTDDNRAYTITAGSAVQDVTKPDLIGLT HCCEEEEECCCCCCEEEECCCEEEEECCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCHH DVFAKMELANKGWATVKSRTGSLDTKTQFITLSDGVDLATNSGYAGQMQDAGVDVKAGTV HHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCEECCCCCCCCHHCCCCEEECCEE TTDHPVVLTYMDGRLVADKLQITDRGGRAFFDGHVQLDFRLSSLPKSEPVPPAPKPIVKQ ECCCCEEEEEECCEEEEEEEEEECCCCCEEEECEEEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA