| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425551
Identifier: 158425551
GI number: 158425551
Start: 4490275
End: 4490871
Strand: Reverse
Name: 158425551
Synonym: AZC_3927
Alternate gene names: NA
Gene position: 4490871-4490275 (Counterclockwise)
Preceding gene: 158425552
Following gene: 158425550
Centisome position: 83.63
GC content: 67.5
Gene sequence:
>597_bases ATGACCTTCCTGTCCCTCCGCCTTGCGGCGGCCGCCTGCGTCCTTTCCCTCGCCGTGCCTGCGCTTGCGCAGCAGCCGGC CGCCAACAGCGGCCCACCGAACGCGCTTCAGGGCTTCGCCCGCAACCGCGACGAGCCCATCCGCATCAATTCCGACACGC TGGAAGTGAAGGACAAGGAGAAGCAGGCCACCTTCTCCGGCAAGGTGGTGGTGGTGCAGGGCGACACCACGCTCCACTGC CCGCAGCTTGTCGTCTATTACGACGGCGACGTGGCGGCCGGCGTCCAGGGCGGCGCTCCGTCGGATTCCAGCAAGATCCG CAAGCTCGAAGCCCTCGGCGGTGTCGTGGTTCAGACAAAGGACCAGACGGCGACCGGCGATACGGGCGTGTTCGAGATGA AGACCAACACCGTCACGCTCACCGGAAAGCCGGTGGTGCTCACCCAGGGCCCGAACGTGGTCCGCGGCCAGAAGCTGGTG GTAGACCTCACGACCGGCGTCTCGAAATTCGAGGGCGGGCGCGTGGATATGCTTCTGACTCCTGGCAGCATGAAGCAGCC GGGCGCCCCCGGGCAGCCGGCGCAGCCGAGCCGCTGA
Upstream 100 bases:
>100_bases GCCGCGCCTTCTTCGATGGCCACGTCCAGCTCGATTTCCGCCTGTCCAGCCTGCCGAAGAGCGAGCCCGTCCCGCCCGCG CCAAAGCCGATTGTGAAGCA
Downstream 100 bases:
>100_bases GGCCGGCCGGAGGCTGTCGTCCGTTTGTCATCGACAGTCTGCCGAGCCTCATCCCAACTGACTTTGCGTGAATGGGCCGC ATGTCGGCCCATTTTTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MTFLSLRLAAAACVLSLAVPALAQQPAANSGPPNALQGFARNRDEPIRINSDTLEVKDKEKQATFSGKVVVVQGDTTLHC PQLVVYYDGDVAAGVQGGAPSDSSKIRKLEALGGVVVQTKDQTATGDTGVFEMKTNTVTLTGKPVVLTQGPNVVRGQKLV VDLTTGVSKFEGGRVDMLLTPGSMKQPGAPGQPAQPSR
Sequences:
>Translated_198_residues MTFLSLRLAAAACVLSLAVPALAQQPAANSGPPNALQGFARNRDEPIRINSDTLEVKDKEKQATFSGKVVVVQGDTTLHC PQLVVYYDGDVAAGVQGGAPSDSSKIRKLEALGGVVVQTKDQTATGDTGVFEMKTNTVTLTGKPVVLTQGPNVVRGQKLV VDLTTGVSKFEGGRVDMLLTPGSMKQPGAPGQPAQPSR >Mature_197_residues TFLSLRLAAAACVLSLAVPALAQQPAANSGPPNALQGFARNRDEPIRINSDTLEVKDKEKQATFSGKVVVVQGDTTLHCP QLVVYYDGDVAAGVQGGAPSDSSKIRKLEALGGVVVQTKDQTATGDTGVFEMKTNTVTLTGKPVVLTQGPNVVRGQKLVV DLTTGVSKFEGGRVDMLLTPGSMKQPGAPGQPAQPSR
Specific function: Unknown
COG id: COG1934
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005653 [H]
Pfam domain/function: PF03968 OstA [H]
EC number: NA
Molecular weight: Translated: 20596; Mature: 20465
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLSLRLAAAACVLSLAVPALAQQPAANSGPPNALQGFARNRDEPIRINSDTLEVKDKE CCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCEEEEECCC KQATFSGKVVVVQGDTTLHCPQLVVYYDGDVAAGVQGGAPSDSSKIRKLEALGGVVVQTK CCEEECCCEEEEECCCEEECCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHCCEEEEEC DQTATGDTGVFEMKTNTVTLTGKPVVLTQGPNVVRGQKLVVDLTTGVSKFEGGRVDMLLT CCCCCCCCCEEEEECCEEEECCCEEEEECCCCEECCCEEEEEEECCCCCCCCCEEEEEEC PGSMKQPGAPGQPAQPSR CCCCCCCCCCCCCCCCCC >Mature Secondary Structure TFLSLRLAAAACVLSLAVPALAQQPAANSGPPNALQGFARNRDEPIRINSDTLEVKDKE CEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCEEEEECCC KQATFSGKVVVVQGDTTLHCPQLVVYYDGDVAAGVQGGAPSDSSKIRKLEALGGVVVQTK CCEEECCCEEEEECCCEEECCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHCCEEEEEC DQTATGDTGVFEMKTNTVTLTGKPVVLTQGPNVVRGQKLVVDLTTGVSKFEGGRVDMLLT CCCCCCCCCEEEEECCEEEECCCEEEEECCCCEECCCEEEEEEECCCCCCCCCEEEEEEC PGSMKQPGAPGQPAQPSR CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430; 2703463 [H]