Click here to switch to the map view.

The map label for this gene is 158425523

Identifier: 158425523

GI number: 158425523

Start: 4451316

End: 4452389

Strand: Reverse

Name: 158425523

Synonym: AZC_3899

Alternate gene names: NA

Gene position: 4452389-4451316 (Counterclockwise)

Preceding gene: 158425524

Following gene: 158425522

Centisome position: 82.92

GC content: 61.92

Gene sequence:

>1074_bases
ATGACAACCCAGAACCAGACGGGGACCCTCCAGATGACATTCGGAAAACTGACGCGCCGCCTCGCTCTGGGGCTCGCGCT
CGGCATGGCGTCCAGCGCCTTCGCTGGCCTGCCCGCGCTTGCTGAAACCAAGATCAAGATGGTGCTGAACTGGAAGTATC
AGGGCCCGCAGGGCATGTTCTTCCTGGCGCAGGACCGGGGCTACTTCAAGGCCGAGGGTCTTGACGTGACCTTCGACCAG
GGCAATGGCTCCGGCGCCGCGGTGCCGCTGGTTGCCAACGGCACCTATGACATGGGCTTCGGCGACGTGAACGCGCTGAT
CGAGCTGGTCGCCAAGAAGCCGGAGGGCGCGCCGGTCGCCGTCTACATCATGTTCAACCAGCCACCCTTCACCATCGCGG
TGAAGGCGGACAGCCCCATCAAGACGCCGAAGGATCTGGAGGGCAAGACGCTGGGTGGTGCGGCCAATGACGGCGCGCTG
AAGCTCTTCCCGGCCTTCTGCAAGCTCGCCAAGATCGACTGCTCCAACATCAAGATCACCAACATGCAGCCGAACCTGCG
CGAGCAGATGCTCATGCAGGGGCAGGTGGATGGCGTGTTCGGCTATGTGAACACCATCCGCTTCTCGGCCAAGCTGATCG
GCGTCGATGACGACAAGCTGCGCTACATCAATTTCGGCGACTACGGCATGGATCTCTATTCCAACGGGATCATCGTGTCC
GCCGATCTCGTGAAGAACAATCCCGAGGCCATCAAGGGTTTCCTGCGTGCTCTGAACAAGGGCATGATCGATGCGCTGAA
GGACCCGGACGCCGCCGTGGCGGCGGTTGCCAAGCGTGAGCCGCTGATCAAGGTGCCGCTGGAGAAAGAACGGTTCGACG
CCACGCTGAAGGCGGAGATGAACCATCCGGAGATCGCCAAGATCGGTCTTGGCAACGTGGATCCCGTCCGCCTGCAGCAG
TCCATCGACATCCTGGTCGATGCCAACAAGCTGCCCTCCACGCCCAAGGCGAGCCAGATCTTCGATCCTGCCTTCCTGCC
CCCGGTCGCCGACCTGCCGAAGAAACTGTTCTGA

Upstream 100 bases:

>100_bases
CGGCCTATGTGTCGGACGCCATCCTCTTCCTCGTGCGCCAGCTCTACGGCGTCACGCTCGCGAGCGATGCCCTCATCGCC
GCGCTCGAAGCCCAGCCTCA

Downstream 100 bases:

>100_bases
GCACCGGCAAGCCTTCGCGCCGCTCCTCAAGGGAGCGGCGCCCAACAAGAACGGACATCCAAAATGGATCTCAAGCTCAA
GGATCGCGTGGCGATCATCA

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; NMT1/THI5 Like Domain-Containing Protein; Diguanylate Cyclase; Membrane Lipoprotein Lipid Attachment Site; NMT1/THI5 Like Family; NMT1/THI5-Like Protein; Histidine Kinase; NMT1/THI5-Like Family; PAS Sensor Protein; Tat Pathway Signal Sequence Domain-Containing Protein; Thiamine Biosynthesis; ABC Transporter Periplasmic Components; Diguanylate Cyclase/Phosphodiesterase; Sulfonate/Nitrate Transport System; Nitrate/Sulfonate/Bicarbonate ABC Transporter Permease; Diguanylate Cyclase With PAS/PAC Sensor; Signal Peptide; Two-Component Sensor Histidine Kinase; Periplasmic-Component Of ABC Transporter; Tat Pathway Signal Sequence Domain Protein; Diguanylate Cyclase With Extracellular Sensor; Two-Component Sensor Protein; Nitrate/Sulfonate ABC Transporter; Diguanylate Cyclase Domain Protein; Sensory Transduction Histidine Kinase; NMT1/THI5-Ike Domain-Containing Protein; NMT1/THI5 Family Protein; ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component; Lipoprotein; Exported Protein; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MTTQNQTGTLQMTFGKLTRRLALGLALGMASSAFAGLPALAETKIKMVLNWKYQGPQGMFFLAQDRGYFKAEGLDVTFDQ
GNGSGAAVPLVANGTYDMGFGDVNALIELVAKKPEGAPVAVYIMFNQPPFTIAVKADSPIKTPKDLEGKTLGGAANDGAL
KLFPAFCKLAKIDCSNIKITNMQPNLREQMLMQGQVDGVFGYVNTIRFSAKLIGVDDDKLRYINFGDYGMDLYSNGIIVS
ADLVKNNPEAIKGFLRALNKGMIDALKDPDAAVAAVAKREPLIKVPLEKERFDATLKAEMNHPEIAKIGLGNVDPVRLQQ
SIDILVDANKLPSTPKASQIFDPAFLPPVADLPKKLF

Sequences:

>Translated_357_residues
MTTQNQTGTLQMTFGKLTRRLALGLALGMASSAFAGLPALAETKIKMVLNWKYQGPQGMFFLAQDRGYFKAEGLDVTFDQ
GNGSGAAVPLVANGTYDMGFGDVNALIELVAKKPEGAPVAVYIMFNQPPFTIAVKADSPIKTPKDLEGKTLGGAANDGAL
KLFPAFCKLAKIDCSNIKITNMQPNLREQMLMQGQVDGVFGYVNTIRFSAKLIGVDDDKLRYINFGDYGMDLYSNGIIVS
ADLVKNNPEAIKGFLRALNKGMIDALKDPDAAVAAVAKREPLIKVPLEKERFDATLKAEMNHPEIAKIGLGNVDPVRLQQ
SIDILVDANKLPSTPKASQIFDPAFLPPVADLPKKLF
>Mature_356_residues
TTQNQTGTLQMTFGKLTRRLALGLALGMASSAFAGLPALAETKIKMVLNWKYQGPQGMFFLAQDRGYFKAEGLDVTFDQG
NGSGAAVPLVANGTYDMGFGDVNALIELVAKKPEGAPVAVYIMFNQPPFTIAVKADSPIKTPKDLEGKTLGGAANDGALK
LFPAFCKLAKIDCSNIKITNMQPNLREQMLMQGQVDGVFGYVNTIRFSAKLIGVDDDKLRYINFGDYGMDLYSNGIIVSA
DLVKNNPEAIKGFLRALNKGMIDALKDPDAAVAAVAKREPLIKVPLEKERFDATLKAEMNHPEIAKIGLGNVDPVRLQQS
IDILVDANKLPSTPKASQIFDPAFLPPVADLPKKLF

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6319957, Length=258, Percent_Identity=27.5193798449612, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6321050, Length=258, Percent_Identity=27.5193798449612, Blast_Score=66, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6323997, Length=281, Percent_Identity=26.3345195729537, Blast_Score=66, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38557; Mature: 38426

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQNQTGTLQMTFGKLTRRLALGLALGMASSAFAGLPALAETKIKMVLNWKYQGPQGMF
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEEEEECCCCCEE
FLAQDRGYFKAEGLDVTFDQGNGSGAAVPLVANGTYDMGFGDVNALIELVAKKPEGAPVA
EEEECCCEEEECCEEEEEECCCCCCEEEEEEECCCEECCCCCHHHHHHHHHCCCCCCCEE
VYIMFNQPPFTIAVKADSPIKTPKDLEGKTLGGAANDGALKLFPAFCKLAKIDCSNIKIT
EEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCEEEE
NMQPNLREQMLMQGQVDGVFGYVNTIRFSAKLIGVDDDKLRYINFGDYGMDLYSNGIIVS
CCCCCHHHHHHHHCCCCHHHHHHEEEEEEEEEEECCCCCEEEEEECCCCHHHHCCCEEEE
ADLVKNNPEAIKGFLRALNKGMIDALKDPDAAVAAVAKREPLIKVPLEKERFDATLKAEM
EHHHCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCEEECCCCHHHCCEEEEECC
NHPEIAKIGLGNVDPVRLQQSIDILVDANKLPSTPKASQIFDPAFLPPVADLPKKLF
CCCCEEEECCCCCCHHHHHCCEEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
TTQNQTGTLQMTFGKLTRRLALGLALGMASSAFAGLPALAETKIKMVLNWKYQGPQGMF
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEEEEECCCCCEE
FLAQDRGYFKAEGLDVTFDQGNGSGAAVPLVANGTYDMGFGDVNALIELVAKKPEGAPVA
EEEECCCEEEECCEEEEEECCCCCCEEEEEEECCCEECCCCCHHHHHHHHHCCCCCCCEE
VYIMFNQPPFTIAVKADSPIKTPKDLEGKTLGGAANDGALKLFPAFCKLAKIDCSNIKIT
EEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCEEEE
NMQPNLREQMLMQGQVDGVFGYVNTIRFSAKLIGVDDDKLRYINFGDYGMDLYSNGIIVS
CCCCCHHHHHHHHCCCCHHHHHHEEEEEEEEEEECCCCCEEEEEECCCCHHHHCCCEEEE
ADLVKNNPEAIKGFLRALNKGMIDALKDPDAAVAAVAKREPLIKVPLEKERFDATLKAEM
EHHHCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCEEECCCCHHHCCEEEEECC
NHPEIAKIGLGNVDPVRLQQSIDILVDANKLPSTPKASQIFDPAFLPPVADLPKKLF
CCCCEEEECCCCCCHHHHHCCEEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA