| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158425518
Identifier: 158425518
GI number: 158425518
Start: 4446358
End: 4447383
Strand: Reverse
Name: 158425518
Synonym: AZC_3894
Alternate gene names: NA
Gene position: 4447383-4446358 (Counterclockwise)
Preceding gene: 158425519
Following gene: 158425517
Centisome position: 82.82
GC content: 63.94
Gene sequence:
>1026_bases ATGAAACGATTGCTTGTGGCCGTCCTGGGCGCGCTCCTGCTGGCAGGGGGAGCCGCCCGTGCAGAGCCGGTGAAGATCCG CTTCACGCTGGACTGGAAGCTCCAGGGCCTCCACGCCTGGTATTACTGGGCCCAGGAGAAGGGATACTTCAAGGCCGAGA ATCTGGACGTCACCATCGATCAGGGCGAAGGTTCGGCCGCGACCGTCACCCGCATCATGTCCGGCGTTTATGATGCCGGC TTCGGCGACATCAATGCCGTGATCCAGAACGCCGCCGTGCGCCCGGCAGAAACGCCGGTCATGGTCTACATGATCTACAG CAAGGCGCCCTTCGCCCTCCTCACCAAAGCGGACAGCCCGGTGAAGAGCGTGAAGGATCTCGCCGGCACCAAGCTCGGCG CGCCTGCGGGCGGCGCCGCCTTCAAGCTGCTGCCCCTTCTGGCGAAGGCCAACGGGCTTGAGTACGGCAGCATCGCCATC ACGCAGGTGGCGCCCAATCTTCAGGAGCAGATGCTGCTTCAGGGCCAGGTGAATTCCATCGCCGTCTTCTCCGCCACCAG CTACATGAACCTCGTCGCCCTGAAGCTCGATCCGGACAAGGACTTCCGCTGGATCTTCTATTCGGACGCCGGCATCGATC TTTATTCCAACGGCATCATGGTGTCCCGGAAGCTGGCGAACGACAGCCCGGAGGCGGTGAAGGGGCTGCTGCGCGCCATC AACCGCTCCATCAGGGAGACGGTTGAGAACCCGGATGCCGCTATCGCACTGCTGGCGGCCAAGGAGCCGCTCATCAACAA GGACATCGAGAAGCGCCGGCTGATCTATGTCTACAAGTCGCTCATCGACACGCCCGAAGCCCGCCAGCTCGGCCTTGGCG ACATCAGCGACGCGCGGTTGGACACAGCCATCAATCTGATCTCCGAAGCCTTCGAACTGCCGAAGAAGCCCGCGCCGGCC CAGGTCTTCGACCGCGCCTTCCTGCCGCCCAAGGCCGACCGCGTGCCGCCGCAGGTGGGCCCGTGA
Upstream 100 bases:
>100_bases CCTCATCGAGGGCCGGGTGATCGGCTGGGCGCGGCGCAAGGACGACTACGCCATGGGCTGAAGCCCAACCGACGCGATGC TCAACTTGCGGGAGTGACCG
Downstream 100 bases:
>100_bases GCGAGCCCCGCACGCTCTCCTGTGCCCATCTGCTGGCCGACCCGCGGGGGGCGGCCGCTGGGCCGAAGCGCCTGACGCTT CGGGACGGACGCATCGAGGC
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; NMT1/THI5 Like Domain Protein; NMT1/THI5 Like Domain-Containing Protein; Tat Pathway Signal Sequence Domain-Containing Protein; Membrane Lipoprotein Lipid Attachment Site; ABC Transporter Periplasmic Components; NMT1/THI5-Like Family; PAS Sensor Protein; Diguanylate Cyclase/Phosphodiesterase; Sulfonate/Nitrate Transport System; Signal Peptide; NMT1/THI5 Like Family; Tat Pathway Signal Sequence Domain Protein; NMT1/THI5 Family Protein; ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component; Exported Protein
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKRLLVAVLGALLLAGGAARAEPVKIRFTLDWKLQGLHAWYYWAQEKGYFKAENLDVTIDQGEGSAATVTRIMSGVYDAG FGDINAVIQNAAVRPAETPVMVYMIYSKAPFALLTKADSPVKSVKDLAGTKLGAPAGGAAFKLLPLLAKANGLEYGSIAI TQVAPNLQEQMLLQGQVNSIAVFSATSYMNLVALKLDPDKDFRWIFYSDAGIDLYSNGIMVSRKLANDSPEAVKGLLRAI NRSIRETVENPDAAIALLAAKEPLINKDIEKRRLIYVYKSLIDTPEARQLGLGDISDARLDTAINLISEAFELPKKPAPA QVFDRAFLPPKADRVPPQVGP
Sequences:
>Translated_341_residues MKRLLVAVLGALLLAGGAARAEPVKIRFTLDWKLQGLHAWYYWAQEKGYFKAENLDVTIDQGEGSAATVTRIMSGVYDAG FGDINAVIQNAAVRPAETPVMVYMIYSKAPFALLTKADSPVKSVKDLAGTKLGAPAGGAAFKLLPLLAKANGLEYGSIAI TQVAPNLQEQMLLQGQVNSIAVFSATSYMNLVALKLDPDKDFRWIFYSDAGIDLYSNGIMVSRKLANDSPEAVKGLLRAI NRSIRETVENPDAAIALLAAKEPLINKDIEKRRLIYVYKSLIDTPEARQLGLGDISDARLDTAINLISEAFELPKKPAPA QVFDRAFLPPKADRVPPQVGP >Mature_341_residues MKRLLVAVLGALLLAGGAARAEPVKIRFTLDWKLQGLHAWYYWAQEKGYFKAENLDVTIDQGEGSAATVTRIMSGVYDAG FGDINAVIQNAAVRPAETPVMVYMIYSKAPFALLTKADSPVKSVKDLAGTKLGAPAGGAAFKLLPLLAKANGLEYGSIAI TQVAPNLQEQMLLQGQVNSIAVFSATSYMNLVALKLDPDKDFRWIFYSDAGIDLYSNGIMVSRKLANDSPEAVKGLLRAI NRSIRETVENPDAAIALLAAKEPLINKDIEKRRLIYVYKSLIDTPEARQLGLGDISDARLDTAINLISEAFELPKKPAPA QVFDRAFLPPKADRVPPQVGP
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36970; Mature: 36970
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLVAVLGALLLAGGAARAEPVKIRFTLDWKLQGLHAWYYWAQEKGYFKAENLDVTID CHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECEEEEEEEECCCCCEEECCEEEEEE QGEGSAATVTRIMSGVYDAGFGDINAVIQNAAVRPAETPVMVYMIYSKAPFALLTKADSP CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCH VKSVKDLAGTKLGAPAGGAAFKLLPLLAKANGLEYGSIAITQVAPNLQEQMLLQGQVNSI HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCEE AVFSATSYMNLVALKLDPDKDFRWIFYSDAGIDLYSNGIMVSRKLANDSPEAVKGLLRAI EEEEECCEEEEEEEEECCCCCEEEEEEECCCCEEECCCEEEEEHHCCCCHHHHHHHHHHH NRSIRETVENPDAAIALLAAKEPLINKDIEKRRLIYVYKSLIDTPEARQLGLGDISDARL HHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHH DTAINLISEAFELPKKPAPAQVFDRAFLPPKADRVPPQVGP HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRLLVAVLGALLLAGGAARAEPVKIRFTLDWKLQGLHAWYYWAQEKGYFKAENLDVTID CHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECEEEEEEEECCCCCEEECCEEEEEE QGEGSAATVTRIMSGVYDAGFGDINAVIQNAAVRPAETPVMVYMIYSKAPFALLTKADSP CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCH VKSVKDLAGTKLGAPAGGAAFKLLPLLAKANGLEYGSIAITQVAPNLQEQMLLQGQVNSI HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCEE AVFSATSYMNLVALKLDPDKDFRWIFYSDAGIDLYSNGIMVSRKLANDSPEAVKGLLRAI EEEEECCEEEEEEEEECCCCCEEEEEEECCCCEEECCCEEEEEHHCCCCHHHHHHHHHHH NRSIRETVENPDAAIALLAAKEPLINKDIEKRRLIYVYKSLIDTPEARQLGLGDISDARL HHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHH DTAINLISEAFELPKKPAPAQVFDRAFLPPKADRVPPQVGP HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA