| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425508
Identifier: 158425508
GI number: 158425508
Start: 4435940
End: 4436929
Strand: Reverse
Name: 158425508
Synonym: AZC_3884
Alternate gene names: NA
Gene position: 4436929-4435940 (Counterclockwise)
Preceding gene: 158425509
Following gene: 158425507
Centisome position: 82.63
GC content: 65.25
Gene sequence:
>990_bases ATGTCGTGGCTGGAAACCTCCATCATGGCGCGGAAGGGCGTGGCGGGCGGCAAGGCGCTCTCGTCCCACGCCATCACCGA GGCGACGCAGGGCACGTACCATTATGTCTATGGCCCCTTCGCCAAGCCGGTGCTCACCGTGGAGCCGGGCGCGGTCGTCT CGGCCGAGACGCACGATGCCTTCGAGGGCAAGATCCGGCATGAAACGGACAGCCCCTCCAAGATCCTGAATTTCCCCTAT CTCAACCCGCAGAACGGCCCCATCTATGTCAACGGGGCGCAGAAGGGCGATGCGCTCGCCGTCTATATCGAGAACATCGA GCCCCGTGGCCCGCAGCCGCGCGGCACCACGGTGGTCATGCCGGAATTCGGCGGCCTCGTGTCCACCGACCACACGGCCA TGCTGCAGGCGCCGCTGCCGGAGGTGGTGAAGAAGCTGCACATCACCAAGGAGGAGGGTACGCGCTGGAGCGACAAGATC ACGCTGCCCTATGAGCCCTTCATCGGCACCATCGGCACCTCGCCGGAGATCGAAGCCATCTCCTCGCTCCAGCCGGATTA TTACGGCGGCAACATGGACCTGCCCGATGTCGGCACGGGGGCCGTCGTCTACCTGCCGGTGAACACGGAGGGCGCGCTGC TCTATCTCGGCGACTGCCACGCGGCGCAGGGCGATGGCGAACTGTGCGGCGTGGCCATCGAGCATCCCACCGTCACCACC GTGCGCATCGACCTCATCAAGGGGTGGACGCTCAAGTGGCCGCGTCTTGAGACGGCGGATGTCATCATGTCCATCGGCTC CGCCCGCCCGCTTGAGGATGCGGCGCGCATCGCCTATCGCGATCTGATCCGCTGGATGGCGGCGGACTACGGCTTCACCG AGATGGACGCCTACATGCTGCTGACGCAGGCCGGGCGCATGCGTCTCGGCAACATGGTGGATCCCAAATACACCATGGGC GCCTCCATCCGGAAAACCTTCCTCGTCTGA
Upstream 100 bases:
>100_bases GAACGACCTTCGGCGGCTTATAAATAAGCAAAAAATCAGTAATTTAAACCAGGAGGCGGGTCCGACGGACACCGACTTCC CCGGAAGAAGGATCAAGAGC
Downstream 100 bases:
>100_bases TCCGGCGCCTGTCGCACGCCCAAAACACGGCCGGCGGCGGGCGCGTCCCGCCGCTCATTCCAGTTGATCCCTGAGGCGGG CCATCATGTCCGAGACCATC
Product: acetamidase
Products: NA
Alternate protein names: Acetamidase/Formamidase Family Protein; Formamidase; Acetamidase; Amidase; Acetamidase/Formamidase Family; Transcriptional Regulator; AraC Family Transcriptional Regulator; Acetamidase/Formamidase Protein; Amidase-Related Protein; Amidae; Twin-Arginine Translocation Pathway Signal; Formamidase/Acetamidase; Transcriptional Regulatory Protein; Transcription Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSWLETSIMARKGVAGGKALSSHAITEATQGTYHYVYGPFAKPVLTVEPGAVVSAETHDAFEGKIRHETDSPSKILNFPY LNPQNGPIYVNGAQKGDALAVYIENIEPRGPQPRGTTVVMPEFGGLVSTDHTAMLQAPLPEVVKKLHITKEEGTRWSDKI TLPYEPFIGTIGTSPEIEAISSLQPDYYGGNMDLPDVGTGAVVYLPVNTEGALLYLGDCHAAQGDGELCGVAIEHPTVTT VRIDLIKGWTLKWPRLETADVIMSIGSARPLEDAARIAYRDLIRWMAADYGFTEMDAYMLLTQAGRMRLGNMVDPKYTMG ASIRKTFLV
Sequences:
>Translated_329_residues MSWLETSIMARKGVAGGKALSSHAITEATQGTYHYVYGPFAKPVLTVEPGAVVSAETHDAFEGKIRHETDSPSKILNFPY LNPQNGPIYVNGAQKGDALAVYIENIEPRGPQPRGTTVVMPEFGGLVSTDHTAMLQAPLPEVVKKLHITKEEGTRWSDKI TLPYEPFIGTIGTSPEIEAISSLQPDYYGGNMDLPDVGTGAVVYLPVNTEGALLYLGDCHAAQGDGELCGVAIEHPTVTT VRIDLIKGWTLKWPRLETADVIMSIGSARPLEDAARIAYRDLIRWMAADYGFTEMDAYMLLTQAGRMRLGNMVDPKYTMG ASIRKTFLV >Mature_328_residues SWLETSIMARKGVAGGKALSSHAITEATQGTYHYVYGPFAKPVLTVEPGAVVSAETHDAFEGKIRHETDSPSKILNFPYL NPQNGPIYVNGAQKGDALAVYIENIEPRGPQPRGTTVVMPEFGGLVSTDHTAMLQAPLPEVVKKLHITKEEGTRWSDKIT LPYEPFIGTIGTSPEIEAISSLQPDYYGGNMDLPDVGTGAVVYLPVNTEGALLYLGDCHAAQGDGELCGVAIEHPTVTTV RIDLIKGWTLKWPRLETADVIMSIGSARPLEDAARIAYRDLIRWMAADYGFTEMDAYMLLTQAGRMRLGNMVDPKYTMGA SIRKTFLV
Specific function: Unknown
COG id: COG2421
COG function: function code C; Predicted acetamidase/formamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35831; Mature: 35700
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLETSIMARKGVAGGKALSSHAITEATQGTYHYVYGPFAKPVLTVEPGAVVSAETHDA CCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCEEEECCCCC FEGKIRHETDSPSKILNFPYLNPQNGPIYVNGAQKGDALAVYIENIEPRGPQPRGTTVVM CCCEEECCCCCCHHEEECCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEE PEFGGLVSTDHTAMLQAPLPEVVKKLHITKEEGTRWSDKITLPYEPFIGTIGTSPEIEAI ECCCCEECCCCCEEEECCHHHHHHHHCCCHHCCCCCCCEEECCCCCCEECCCCCCCHHHH SSLQPDYYGGNMDLPDVGTGAVVYLPVNTEGALLYLGDCHAAQGDGELCGVAIEHPTVTT HHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCEEEE VRIDLIKGWTLKWPRLETADVIMSIGSARPLEDAARIAYRDLIRWMAADYGFTEMDAYML EEEEEECCCEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHE LTQAGRMRLGNMVDPKYTMGASIRKTFLV EHHHCCHHCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure SWLETSIMARKGVAGGKALSSHAITEATQGTYHYVYGPFAKPVLTVEPGAVVSAETHDA CHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCEEEECCCCC FEGKIRHETDSPSKILNFPYLNPQNGPIYVNGAQKGDALAVYIENIEPRGPQPRGTTVVM CCCEEECCCCCCHHEEECCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEE PEFGGLVSTDHTAMLQAPLPEVVKKLHITKEEGTRWSDKITLPYEPFIGTIGTSPEIEAI ECCCCEECCCCCEEEECCHHHHHHHHCCCHHCCCCCCCEEECCCCCCEECCCCCCCHHHH SSLQPDYYGGNMDLPDVGTGAVVYLPVNTEGALLYLGDCHAAQGDGELCGVAIEHPTVTT HHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCEEEE VRIDLIKGWTLKWPRLETADVIMSIGSARPLEDAARIAYRDLIRWMAADYGFTEMDAYML EEEEEECCCEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHE LTQAGRMRLGNMVDPKYTMGASIRKTFLV EHHHCCHHCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA