| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425481
Identifier: 158425481
GI number: 158425481
Start: 4409324
End: 4410223
Strand: Direct
Name: 158425481
Synonym: AZC_3857
Alternate gene names: NA
Gene position: 4409324-4410223 (Clockwise)
Preceding gene: 158425479
Following gene: 158425482
Centisome position: 82.11
GC content: 63.22
Gene sequence:
>900_bases ATGGGATTCGGCGTCTTCATTCACCGCTCAGACTCGATTTATGACGACAGCCCGGCTGAGCGGTATCAGTTCCCGCGCCC ATATCTGGGACGCGTCGAGGCCTGCGTCGGCGACTGGATCGTTTATTACGAACCCCGGAAAGTGGCGGAGACCCGCGGCT ATTTCGCGATCGCCAGAGTCCAGCGCGTCGTTCCTGATCCCACCGCTCCGGGCATGTATCTCGCTCTCATCGAACCGGGC AGTTATCTCGATTTTGCCAGCCCGGTGCCTTTCACCGATGCGGATGGCGTGGTCGAGCGCGGAGTGCTGAACGCCGACGG GCGCATTTCGGGGCGCGCGCAAGCCGCCGTGCGTCCACTCTCGCGGGACGATTTCAACCGGATCGTCACGCTCGGGCTGA ATGATAGCGAGCCGCTGCTGCCACGCGTCGACGAGGGTGCATCCCTCTCAGGCTTTGAAGAAGAACAAGCGCCATTCGTG TTCGAGCAGCCCCGCGAGCGCGTCAACACTCTGTCGTCTCGCATTGTCCGCGACCGCATCTTCCGGCGCGTCGTGCTGCG CGCCTATGACGAGCGCTGCGCCATTAGCGGGCTGAAGCTGATCAATGGCGGCGGGCGCGCCGAGGTGGCGGCCGCGCATA TCCGGCCTGTCGAAGCGAGTGGCCCCGACATCGTCAGCAACGGGTTGGCGCTTTCTGGCACGGCGCACTGGATGTTCGAT CGCGGACTGATCAGCCTCTCGGATGATCTGGACATCCTCATTTCCCGGCAAACCAACGATCCCGACGGCGTGCGCGCCTT CATCAATAAAGACGGCCGCGCCATCGCGCCACGCAGGTTGATCGAGCGACCCCATCCCCATTTCCTGCGCTGGCACAGGG AGCATTGTTTCAAGCCGTGA
Upstream 100 bases:
>100_bases GGTCGATAACGTGATGCGCGCGACCAGGGGTGAAAAGGTCCACCTGCTGCCGAACGATACCCATTGTGCGCTACGATCGA ATGGGGATCAGGGATGGCAC
Downstream 100 bases:
>100_bases AGCGGCGGCTCCCTATGCCGCTTGCGATCACTGCACAGCAGTTCCGCCGTTCGCCTGTCATTGCACGCCACGCTGCGACG CGAAGGGAAACCTGTTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MGFGVFIHRSDSIYDDSPAERYQFPRPYLGRVEACVGDWIVYYEPRKVAETRGYFAIARVQRVVPDPTAPGMYLALIEPG SYLDFASPVPFTDADGVVERGVLNADGRISGRAQAAVRPLSRDDFNRIVTLGLNDSEPLLPRVDEGASLSGFEEEQAPFV FEQPRERVNTLSSRIVRDRIFRRVVLRAYDERCAISGLKLINGGGRAEVAAAHIRPVEASGPDIVSNGLALSGTAHWMFD RGLISLSDDLDILISRQTNDPDGVRAFINKDGRAIAPRRLIERPHPHFLRWHREHCFKP
Sequences:
>Translated_299_residues MGFGVFIHRSDSIYDDSPAERYQFPRPYLGRVEACVGDWIVYYEPRKVAETRGYFAIARVQRVVPDPTAPGMYLALIEPG SYLDFASPVPFTDADGVVERGVLNADGRISGRAQAAVRPLSRDDFNRIVTLGLNDSEPLLPRVDEGASLSGFEEEQAPFV FEQPRERVNTLSSRIVRDRIFRRVVLRAYDERCAISGLKLINGGGRAEVAAAHIRPVEASGPDIVSNGLALSGTAHWMFD RGLISLSDDLDILISRQTNDPDGVRAFINKDGRAIAPRRLIERPHPHFLRWHREHCFKP >Mature_298_residues GFGVFIHRSDSIYDDSPAERYQFPRPYLGRVEACVGDWIVYYEPRKVAETRGYFAIARVQRVVPDPTAPGMYLALIEPGS YLDFASPVPFTDADGVVERGVLNADGRISGRAQAAVRPLSRDDFNRIVTLGLNDSEPLLPRVDEGASLSGFEEEQAPFVF EQPRERVNTLSSRIVRDRIFRRVVLRAYDERCAISGLKLINGGGRAEVAAAHIRPVEASGPDIVSNGLALSGTAHWMFDR GLISLSDDLDILISRQTNDPDGVRAFINKDGRAIAPRRLIERPHPHFLRWHREHCFKP
Specific function: Unknown
COG id: COG3440
COG function: function code V; Predicted restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33467; Mature: 33336
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFGVFIHRSDSIYDDSPAERYQFPRPYLGRVEACVGDWIVYYEPRKVAETRGYFAIARV CCEEEEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHCCEEEEECCHHHHHHCCHHHEEHH QRVVPDPTAPGMYLALIEPGSYLDFASPVPFTDADGVVERGVLNADGRISGRAQAAVRPL HHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHCCC SRDDFNRIVTLGLNDSEPLLPRVDEGASLSGFEEEQAPFVFEQPRERVNTLSSRIVRDRI CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCHHHCHHHHHHHHHHHHHHHHH FRRVVLRAYDERCAISGLKLINGGGRAEVAAAHIRPVEASGPDIVSNGLALSGTAHWMFD HHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEEECCCCCCCHHHCCEEECCCEEEEEE RGLISLSDDLDILISRQTNDPDGVRAFINKDGRAIAPRRLIERPHPHFLRWHREHCFKP CCEEEECCCCEEEEECCCCCCCHHHHHHCCCCCEECCHHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure GFGVFIHRSDSIYDDSPAERYQFPRPYLGRVEACVGDWIVYYEPRKVAETRGYFAIARV CEEEEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHCCEEEEECCHHHHHHCCHHHEEHH QRVVPDPTAPGMYLALIEPGSYLDFASPVPFTDADGVVERGVLNADGRISGRAQAAVRPL HHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHCCC SRDDFNRIVTLGLNDSEPLLPRVDEGASLSGFEEEQAPFVFEQPRERVNTLSSRIVRDRI CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCHHHCHHHHHHHHHHHHHHHHH FRRVVLRAYDERCAISGLKLINGGGRAEVAAAHIRPVEASGPDIVSNGLALSGTAHWMFD HHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEEECCCCCCCHHHCCEEECCCEEEEEE RGLISLSDDLDILISRQTNDPDGVRAFINKDGRAIAPRRLIERPHPHFLRWHREHCFKP CCEEEECCCCEEEEECCCCCCCHHHHHHCCCCCEECCHHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA