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The map label for this gene is yjbJ [H]

Identifier: 158425453

GI number: 158425453

Start: 4382663

End: 4383325

Strand: Reverse

Name: yjbJ [H]

Synonym: AZC_3829

Alternate gene names: 158425453

Gene position: 4383325-4382663 (Counterclockwise)

Preceding gene: 158425454

Following gene: 158425452

Centisome position: 81.63

GC content: 66.06

Gene sequence:

>663_bases
ATGCGTCGCTCCGCTTCTTTGCTCGCAGCCGTGCTGTCATTCAGCTGCGTGTTTTCCTCCATCGGCAACGCGCAAAACGC
GCCGCCGGTTATGAAGGCCTCAGACAATGCCTACGCCGCCTATATCGACGAGGCTGCGCAGCGCTTCGAGCTTCCGGCCA
GCTGGATCCGTGCAGTCATGCAAGCCGAGAGCAGCGGCGATCCGCACGCCGCCTCATCGGCCGGTGCCATGGGGCTGATG
CAGATCATGCCCACGACCTGGAACGAGCTTCGCATCCATCATGGTCTCGGCGTCGATCCGTTCGACCCGCGCGACAACAT
CCTCGCTGGCGCGGCCTATCTGCGCCAGCTCCATGACCGCTATGGCAGCATCCGCGCCATGCTCGCGGCCTACAATGCCG
GGCCGGCGCGCTATGAAGCGTCGCTTGCCGGCAAACCGCTGCCGCCAGAGACGCGCACTTACATCGCGGCTCTGGCGCCG
ATCATCGACAATCAGTCTGCGGCCGGCGCCACCGCATCGGTGCGGCCAATGACGCAAAGCTGGCGCGAGGCTCCGCTGTT
CGCCACGCCGCCCGAGCGCAGCAATCCAGTCGATTCCGGGTTCCTCGCGCCGCGATCGGACGCGCTGTTCGTCGCACCGT
TGCCATCGCGGAGGGCGCCATGA

Upstream 100 bases:

>100_bases
GGGCCGATTTCAGACGGCACCGTCATCGGCCGTGCGATGCCACTCCTCACGGATGAAGCCGGCAACAGTGACTTCGTCTG
GCGCGCGGCGGTGCGCTGAC

Downstream 100 bases:

>100_bases
GCAGGCGGGCCCGCTTTCGCATGGTGTCGGGCTCTGGCGTTCCTTGGTGAGCAAGGAGGCGTAGGACCGGGACCACGACC
GCACGAGGGCAGGATAAAAG

Product: lytic transglycosylase precursor

Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRRSASLLAAVLSFSCVFSSIGNAQNAPPVMKASDNAYAAYIDEAAQRFELPASWIRAVMQAESSGDPHAASSAGAMGLM
QIMPTTWNELRIHHGLGVDPFDPRDNILAGAAYLRQLHDRYGSIRAMLAAYNAGPARYEASLAGKPLPPETRTYIAALAP
IIDNQSAAGATASVRPMTQSWREAPLFATPPERSNPVDSGFLAPRSDALFVAPLPSRRAP

Sequences:

>Translated_220_residues
MRRSASLLAAVLSFSCVFSSIGNAQNAPPVMKASDNAYAAYIDEAAQRFELPASWIRAVMQAESSGDPHAASSAGAMGLM
QIMPTTWNELRIHHGLGVDPFDPRDNILAGAAYLRQLHDRYGSIRAMLAAYNAGPARYEASLAGKPLPPETRTYIAALAP
IIDNQSAAGATASVRPMTQSWREAPLFATPPERSNPVDSGFLAPRSDALFVAPLPSRRAP
>Mature_220_residues
MRRSASLLAAVLSFSCVFSSIGNAQNAPPVMKASDNAYAAYIDEAAQRFELPASWIRAVMQAESSGDPHAASSAGAMGLM
QIMPTTWNELRIHHGLGVDPFDPRDNILAGAAYLRQLHDRYGSIRAMLAAYNAGPARYEASLAGKPLPPETRTYIAALAP
IIDNQSAAGATASVRPMTQSWREAPLFATPPERSNPVDSGFLAPRSDALFVAPLPSRRAP

Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 23492; Mature: 23492

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSASLLAAVLSFSCVFSSIGNAQNAPPVMKASDNAYAAYIDEAAQRFELPASWIRAVM
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHH
QAESSGDPHAASSAGAMGLMQIMPTTWNELRIHHGLGVDPFDPRDNILAGAAYLRQLHDR
HHCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
YGSIRAMLAAYNAGPARYEASLAGKPLPPETRTYIAALAPIIDNQSAAGATASVRPMTQS
HHHHHHHHHHHCCCCHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
WREAPLFATPPERSNPVDSGFLAPRSDALFVAPLPSRRAP
HHHCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MRRSASLLAAVLSFSCVFSSIGNAQNAPPVMKASDNAYAAYIDEAAQRFELPASWIRAVM
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHH
QAESSGDPHAASSAGAMGLMQIMPTTWNELRIHHGLGVDPFDPRDNILAGAAYLRQLHDR
HHCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
YGSIRAMLAAYNAGPARYEASLAGKPLPPETRTYIAALAPIIDNQSAAGATASVRPMTQS
HHHHHHHHHHHCCCCHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
WREAPLFATPPERSNPVDSGFLAPRSDALFVAPLPSRRAP
HHHCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]