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The map label for this gene is yagA [H]

Identifier: 158425425

GI number: 158425425

Start: 4354702

End: 4355634

Strand: Direct

Name: yagA [H]

Synonym: AZC_3801

Alternate gene names: 158425425

Gene position: 4354702-4355634 (Clockwise)

Preceding gene: 158425416

Following gene: 158425427

Centisome position: 81.1

GC content: 67.74

Gene sequence:

>933_bases
ATGAACAACCCGCACCAGAATGCGCGAACGACGCCGCTTGGTCGAGCCGAGATGGTTCGGCGGATCGTCGAGGAAGGCCG
GCCAGTCGCCGAAGTGGCGGCCGGCTTCGGGATCAGCGAAAGGACGGCCCGCAAGTGGCTCGCCCGCTGGCGGGCCGAGG
GGACGTCGGGCCTTCAGAACCGCTCGTCCCGCCCGCACGCCGCTGACGATGAGGCTGGCCGGTTCTGGCGGGCAATGGCA
GCTCGCCTGCGTCGGGAGTATCGGTTGAGCGGCGAGGAGATCGCCGTCCGGCTGGGCTTTGCCCGCTCCACGGTGGCCGG
ATGGCTGACGCGGATGCGGCTCGGAAGCCTTGCCGCGCTGATGCCCCAGGAGCCGGTCCGACGCTATCAGCGCGAGCGGC
CGGGCGAGCTGATCCATCTCGACATCAAGAAGCTCGCCCGCTTCGCGGGTGTCGGCCACCGCATCACCGGCAACCGGCGC
GGGGCGAGTGAAGGCATGGGCTACGACTTCCTGCATGTGGCCATCGATGACGCCACCCGTCTTGCCTATGTGGAAGTGCT
GCCGGATGAGCGGCGGGGATCGACGACAGGCTTCCTCATTCGCGCCCTGCGCTGGTTCCGGGCGCGCGGCATCCGGGTCG
AGCGGGTGATGACCGACAATGGGGCCGGCTACATCGCCAGGCTGTTCCGCAAGGTGCTGCGGATACTGGGCATCCGGCAC
ATCCGCACCCGACCCTACACGCCGAAGACCAATGGCAAGGCCGAGCGTTTCATTCAGACCCTGCTGCGCGAATGGGCCTA
TGCCATCCCGTTCCCGTCTTCTGAACGCCGCGCCGCCGACCTGCCCCGATGGCTCGCCTGGTACAATCACCAAAGGCCAC
ATGGTAGCCTCGACCGCAGAACGCCAGCTCAGGCTCTCGCCGGAACAACCTGA

Upstream 100 bases:

>100_bases
TAGGTCACTAATACCTAGATGTGGCTTCCGGAGAGGTTGTTCATCGCCCGTGAGAGCCTGAAGGTGGTTGTTGCGACACG
ACCGACCGCAGGACACGAGG

Downstream 100 bases:

>100_bases
TCAGAAGTCACACCTAGAGGATCGCCAAGGCTTTAGTAGTAAGGCTAATGGTACGGTCCGTCACAACGCTGTCGTCAGCC
ATTGGTGGCTTCATTGTGGG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MNNPHQNARTTPLGRAEMVRRIVEEGRPVAEVAAGFGISERTARKWLARWRAEGTSGLQNRSSRPHAADDEAGRFWRAMA
ARLRREYRLSGEEIAVRLGFARSTVAGWLTRMRLGSLAALMPQEPVRRYQRERPGELIHLDIKKLARFAGVGHRITGNRR
GASEGMGYDFLHVAIDDATRLAYVEVLPDERRGSTTGFLIRALRWFRARGIRVERVMTDNGAGYIARLFRKVLRILGIRH
IRTRPYTPKTNGKAERFIQTLLREWAYAIPFPSSERRAADLPRWLAWYNHQRPHGSLDRRTPAQALAGTT

Sequences:

>Translated_310_residues
MNNPHQNARTTPLGRAEMVRRIVEEGRPVAEVAAGFGISERTARKWLARWRAEGTSGLQNRSSRPHAADDEAGRFWRAMA
ARLRREYRLSGEEIAVRLGFARSTVAGWLTRMRLGSLAALMPQEPVRRYQRERPGELIHLDIKKLARFAGVGHRITGNRR
GASEGMGYDFLHVAIDDATRLAYVEVLPDERRGSTTGFLIRALRWFRARGIRVERVMTDNGAGYIARLFRKVLRILGIRH
IRTRPYTPKTNGKAERFIQTLLREWAYAIPFPSSERRAADLPRWLAWYNHQRPHGSLDRRTPAQALAGTT
>Mature_310_residues
MNNPHQNARTTPLGRAEMVRRIVEEGRPVAEVAAGFGISERTARKWLARWRAEGTSGLQNRSSRPHAADDEAGRFWRAMA
ARLRREYRLSGEEIAVRLGFARSTVAGWLTRMRLGSLAALMPQEPVRRYQRERPGELIHLDIKKLARFAGVGHRITGNRR
GASEGMGYDFLHVAIDDATRLAYVEVLPDERRGSTTGFLIRALRWFRARGIRVERVMTDNGAGYIARLFRKVLRILGIRH
IRTRPYTPKTNGKAERFIQTLLREWAYAIPFPSSERRAADLPRWLAWYNHQRPHGSLDRRTPAQALAGTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786462, Length=318, Percent_Identity=29.559748427673, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 35438; Mature: 35438

Theoretical pI: Translated: 12.04; Mature: 12.04

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNPHQNARTTPLGRAEMVRRIVEEGRPVAEVAAGFGISERTARKWLARWRAEGTSGLQN
CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHC
RSSRPHAADDEAGRFWRAMAARLRREYRLSGEEIAVRLGFARSTVAGWLTRMRLGSLAAL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHH
MPQEPVRRYQRERPGELIHLDIKKLARFAGVGHRITGNRRGASEGMGYDFLHVAIDDATR
CCHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCHHH
LAYVEVLPDERRGSTTGFLIRALRWFRARGIRVERVMTDNGAGYIARLFRKVLRILGIRH
EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCHHH
IRTRPYTPKTNGKAERFIQTLLREWAYAIPFPSSERRAADLPRWLAWYNHQRPHGSLDRR
HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
TPAQALAGTT
CHHHHHCCCC
>Mature Secondary Structure
MNNPHQNARTTPLGRAEMVRRIVEEGRPVAEVAAGFGISERTARKWLARWRAEGTSGLQN
CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHC
RSSRPHAADDEAGRFWRAMAARLRREYRLSGEEIAVRLGFARSTVAGWLTRMRLGSLAAL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHH
MPQEPVRRYQRERPGELIHLDIKKLARFAGVGHRITGNRRGASEGMGYDFLHVAIDDATR
CCHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCHHH
LAYVEVLPDERRGSTTGFLIRALRWFRARGIRVERVMTDNGAGYIARLFRKVLRILGIRH
EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCHHH
IRTRPYTPKTNGKAERFIQTLLREWAYAIPFPSSERRAADLPRWLAWYNHQRPHGSLDRR
HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
TPAQALAGTT
CHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 8113168 [H]