| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is pepIP [H]
Identifier: 158425397
GI number: 158425397
Start: 4327815
End: 4328615
Strand: Direct
Name: pepIP [H]
Synonym: AZC_3773
Alternate gene names: 158425397
Gene position: 4327815-4328615 (Clockwise)
Preceding gene: 158425396
Following gene: 158425398
Centisome position: 80.6
GC content: 66.92
Gene sequence:
>801_bases GTGGCGGGAGAGGGCCACGACGAGACCATCGTCGTGCTCCATGGCGGACGCGGCATCGGCGACCACCGGGCCGATTTCCA GGCCTTCCTGCCCCTTACCGACTGCTATCGGCTGCTCGCTTATGACCAGCGTGGCTGCGGACTCTCCTCGCTGACGCCGC CCTATACCTTCGGCCAGTTCGCGGATGATCTCGAAGCCATCCGGCAGGAGCTGTGCGGCGGCGGCCGCATCATCCTGATC GGCGGCTCCTTCGGCGGCATGATCGCCCTCACCTATGCGGTGAAATATGGCGCGAACGGCCTCTCCCGCCTCATCCTGCG CGGCACGGCGCCGAGCCACCACCATGAGGCGGAGGCCATCGCCAATTTCAAGGCGCGCCTGCACAAGGCGCCCAGTGCCT CCCTGCGCATGGTGGAGAAGATGTTCTCGGACGTCATCGACGACACCGAGCTGCGCCTCATCTGGCTGGCCCTCCAGCCG CTCTATTTCGAGACCTTCGATCCCGACGCCGCGCTGGAGCGCACCCGCACGCTGAGCCTGCACGCGGAGACGCATAACGC CCTCTTCGCCGTGAAGGACTATGACCTGCGCGACCAGTTGCCCGGCATCGCGGTGCCGACACAGGTGATCGTGGGCGGCG AGGACTGGATCTGCCCGCCTTCCCAGTCGCGCCTCATCGCCGAGCGCGTGCCCGGCGCGGAGCTTCTGGAAATTCCGGGC GCGAACCATTCCGTCCATATCGAGGCCAACGCACAGGTGCTCGCCGGCATCCGCTCCTTCCTCGAAAGGACGGCCCCGTG A
Upstream 100 bases:
>100_bases GACGAATGGACGGATGCGGACGCGCCGCCACGGGAGGGCACCCATGCCGCCGAGTGAGCCGCGCAGCATCACGCTCAATG GGGCGCGCTTCGTCTATGAC
Downstream 100 bases:
>100_bases CGCGCTATATGGCGGCGAAATTCGGCGAGGCGCTCATCGCCATCTGGGGCGTGGTGACGATCGTCTTCTTCGTCACGCGC CTTGTGGGCGACCCGGTGGC
Product: prolyl aminopeptidase
Products: NA
Alternate protein names: PIP; Prolyl aminopeptidase; PAP [H]
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MAGEGHDETIVVLHGGRGIGDHRADFQAFLPLTDCYRLLAYDQRGCGLSSLTPPYTFGQFADDLEAIRQELCGGGRIILI GGSFGGMIALTYAVKYGANGLSRLILRGTAPSHHHEAEAIANFKARLHKAPSASLRMVEKMFSDVIDDTELRLIWLALQP LYFETFDPDAALERTRTLSLHAETHNALFAVKDYDLRDQLPGIAVPTQVIVGGEDWICPPSQSRLIAERVPGAELLEIPG ANHSVHIEANAQVLAGIRSFLERTAP
Sequences:
>Translated_266_residues MAGEGHDETIVVLHGGRGIGDHRADFQAFLPLTDCYRLLAYDQRGCGLSSLTPPYTFGQFADDLEAIRQELCGGGRIILI GGSFGGMIALTYAVKYGANGLSRLILRGTAPSHHHEAEAIANFKARLHKAPSASLRMVEKMFSDVIDDTELRLIWLALQP LYFETFDPDAALERTRTLSLHAETHNALFAVKDYDLRDQLPGIAVPTQVIVGGEDWICPPSQSRLIAERVPGAELLEIPG ANHSVHIEANAQVLAGIRSFLERTAP >Mature_265_residues AGEGHDETIVVLHGGRGIGDHRADFQAFLPLTDCYRLLAYDQRGCGLSSLTPPYTFGQFADDLEAIRQELCGGGRIILIG GSFGGMIALTYAVKYGANGLSRLILRGTAPSHHHEAEAIANFKARLHKAPSASLRMVEKMFSDVIDDTELRLIWLALQPL YFETFDPDAALERTRTLSLHAETHNALFAVKDYDLRDQLPGIAVPTQVIVGGEDWICPPSQSRLIAERVPGAELLEIPGA NHSVHIEANAQVLAGIRSFLERTAP
Specific function: Characterized by a high specificity towards di- or tripeptides with proline at the NH(2)-terminal position, but is not able to hydrolyze longer peptides, or peptides with hydroxyproline at the NH(2)-end [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cell envelope [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR005945 - InterPro: IPR002410 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.4.11.5 [H]
Molecular weight: Translated: 29022; Mature: 28891
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGEGHDETIVVLHGGRGIGDHRADFQAFLPLTDCYRLLAYDQRGCGLSSLTPPYTFGQF CCCCCCCCEEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH ADDLEAIRQELCGGGRIILIGGSFGGMIALTYAVKYGANGLSRLILRGTAPSHHHEAEAI HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHEEECCCCCCCHHHHHH ANFKARLHKAPSASLRMVEKMFSDVIDDTELRLIWLALQPLYFETFDPDAALERTRTLSL HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEECCCCHHHHHHHEEEEE HAETHNALFAVKDYDLRDQLPGIAVPTQVIVGGEDWICPPSQSRLIAERVPGAELLEIPG EECCCCEEEEEECCCHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCEEECCC ANHSVHIEANAQVLAGIRSFLERTAP CCCEEEEECCHHHHHHHHHHHHHCCC >Mature Secondary Structure AGEGHDETIVVLHGGRGIGDHRADFQAFLPLTDCYRLLAYDQRGCGLSSLTPPYTFGQF CCCCCCCEEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH ADDLEAIRQELCGGGRIILIGGSFGGMIALTYAVKYGANGLSRLILRGTAPSHHHEAEAI HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHEEECCCCCCCHHHHHH ANFKARLHKAPSASLRMVEKMFSDVIDDTELRLIWLALQPLYFETFDPDAALERTRTLSL HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEECCCCHHHHHHHEEEEE HAETHNALFAVKDYDLRDQLPGIAVPTQVIVGGEDWICPPSQSRLIAERVPGAELLEIPG EECCCCEEEEEECCCHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCEEECCC ANHSVHIEANAQVLAGIRSFLERTAP CCCEEEEECCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8012575; 8012576 [H]