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The map label for this gene is yddU [C]

Identifier: 158425390

GI number: 158425390

Start: 4320446

End: 4321279

Strand: Direct

Name: yddU [C]

Synonym: AZC_3766

Alternate gene names: 158425390

Gene position: 4320446-4321279 (Clockwise)

Preceding gene: 158425389

Following gene: 158425392

Centisome position: 80.46

GC content: 64.27

Gene sequence:

>834_bases
ATGGAACCCGAGGATCGCTACAACGCGTCACTCACCGATGAGGGGCACTATCGCATCCTTCTGGATGCGGTACCCGAGTG
CGCCATCTACATGATGAACACGGAAGGCGTCGTGGTGAGTTGGAACGAGGGCGCCCAGCGCCTGCTCGGCTACGAGACCA
AGGAAATCGTCGGCGAGAACTTCTCCTGCTTCTACGCCTCCTCCGACAATCAGGCCGAACTGCCCCGCCAGTCGCTCGCC
ATCGCCTCCAAGGAACGCAAGTTCACCGGCCAGTGCTGGCAGAAGCGCAAGAACGGCACGCGCTTCTGGGCCGAGATCGT
CATCTTCCCCATCCGCAACCCGCTCGGCCCCCTGGTGGGCTATGCCAAGATCACCCGCGACATCAGCGAGATCCGCGCCG
TCCGTGAGGCGCTCTGGCGGTGCGAGGAGCGCTTCCGCTTGCTGGTGGAAGGCGAGAACACCCATGGCGTCTACATGCTG
GACCCCAAGGGCGAGATCTCGACCTGGAACACCGCCGCCGAGCAGATCCACGGCTATACGGCCGACGAGATCGTGGGCGA
GAATTTTTCCCGCTTCTACACAGAGGCGGACCGCGCCGCAGGCCTGCCCAGGCAGGTGCTGGAGACGGCCACGAAGACCG
GCCGCCATGAAAAGGAAGGCTGGCGGCTGCGCAAGAACGGCACGCTGATCTGGACGCGGGTCATTCTCGATGCGATCCGC
GATCCCGACGACAACCTCATCGGCTTTGCCGAGATCGTCCGCGATCTGAGCGACGATTACGGCCTGCCCGACGACATGCG
CGAACCCGCCCCCGCCTCGCCCATGGGCGAGTGA

Upstream 100 bases:

>100_bases
GCGTTCAGCACTTCCTTGAGAGCGGGCTTCGGCGCAGTTTGCGTGTCGCGCGCACCAGTCGCTTGTTTTACTGAACGATA
CCGTCACGGGGCATGGGACG

Downstream 100 bases:

>100_bases
GGCGTCGCCGTCAGAAGCGGTAGTTCACCCACAGGACGAGACCGTTCTCCTGCGGGAAGTTGCGGGCGAGGTAGGTGGTG
AACGCGGCAAGACCGACGCG

Product: two-component sensor histidine kinase

Products: NA

Alternate protein names: PAS/PAC Sensor Signal Transduction Histidine Kinase; Signal Transduction Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; Sensory Transduction Histidine Kinase; Two-Component Hybrid Sensor And Regulator; PAS/PAC Sensor Protein; Multi-Sensor Signal Transduction Histidine Kinase; PAS Sensor Protein; Sensory Box Protein; Sensor Histidine Kinase; Two-Component Sensor Histidine Kinase; Sensory Box Histidine Kinase/Response Regulator; Sensory Box Histidine Kinase; PAS Fold Family; Two-Component System Sensor Protein; Two-Component Sensor Histidine Kinase Protein; Sensory Transduction Protein Kinase; Signal Transduction Protein; LuxR Family Transcriptional Regulator; HTR-Like Protein; GGDEF Domain-Containing Protein; Light- And Oxygen-Sensing Histidine Kinase; Signal-Transducing Histidine Kinase; Chemotaxis Methyltransferase Protein; Sigma-54 Dependent Transcriptional Regulator Fis Family; Aerobic Respiration Sensor-Response Protein; PAS/PAC Domain-Containing Protein; HD-GYP Domain-Containing Protein; Sensor Protein; Sensor Hybrid Histidine Kinase With PAS Domain; Sensor/Response Regulator Hybrid; Two-Component Hybrid Histidine Kinase; Pas Domain S-Box; Diguanylate Cyclase With PAS Domain; Two-Component System Sensor Kinase; Diguanylate Cyclase And Metal Dependent Phosphohydrolase; Sensory Box; Heme-Regulated Cyclic AMP Phosphodiesterase; Two-Component System Sensor Sporulation Kinase C; Sensor Histidine Kinase Of Two-Component; Two-Component Regulatory System Protein; Sensory Box Sensor Histidine Kinase/Response Regulator; Signaling Protein; FOG PAS/PAC Domain Protein; Sensory Box Histidine Kinase/Response Regulator Hybrid; Fis Family Transcriptional Regulator; Histidine Kinase/Response Regulator Hybrid Protein

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MEPEDRYNASLTDEGHYRILLDAVPECAIYMMNTEGVVVSWNEGAQRLLGYETKEIVGENFSCFYASSDNQAELPRQSLA
IASKERKFTGQCWQKRKNGTRFWAEIVIFPIRNPLGPLVGYAKITRDISEIRAVREALWRCEERFRLLVEGENTHGVYML
DPKGEISTWNTAAEQIHGYTADEIVGENFSRFYTEADRAAGLPRQVLETATKTGRHEKEGWRLRKNGTLIWTRVILDAIR
DPDDNLIGFAEIVRDLSDDYGLPDDMREPAPASPMGE

Sequences:

>Translated_277_residues
MEPEDRYNASLTDEGHYRILLDAVPECAIYMMNTEGVVVSWNEGAQRLLGYETKEIVGENFSCFYASSDNQAELPRQSLA
IASKERKFTGQCWQKRKNGTRFWAEIVIFPIRNPLGPLVGYAKITRDISEIRAVREALWRCEERFRLLVEGENTHGVYML
DPKGEISTWNTAAEQIHGYTADEIVGENFSRFYTEADRAAGLPRQVLETATKTGRHEKEGWRLRKNGTLIWTRVILDAIR
DPDDNLIGFAEIVRDLSDDYGLPDDMREPAPASPMGE
>Mature_277_residues
MEPEDRYNASLTDEGHYRILLDAVPECAIYMMNTEGVVVSWNEGAQRLLGYETKEIVGENFSCFYASSDNQAELPRQSLA
IASKERKFTGQCWQKRKNGTRFWAEIVIFPIRNPLGPLVGYAKITRDISEIRAVREALWRCEERFRLLVEGENTHGVYML
DPKGEISTWNTAAEQIHGYTADEIVGENFSRFYTEADRAAGLPRQVLETATKTGRHEKEGWRLRKNGTLIWTRVILDAIR
DPDDNLIGFAEIVRDLSDDYGLPDDMREPAPASPMGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31583; Mature: 31583

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPEDRYNASLTDEGHYRILLDAVPECAIYMMNTEGVVVSWNEGAQRLLGYETKEIVGEN
CCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEECCHHHHHHHCCCHHHHHCCC
FSCFYASSDNQAELPRQSLAIASKERKFTGQCWQKRKNGTRFWAEIVIFPIRNPLGPLVG
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHH
YAKITRDISEIRAVREALWRCEERFRLLVEGENTHGVYMLDPKGEISTWNTAAEQIHGYT
HHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHCCCC
ADEIVGENFSRFYTEADRAAGLPRQVLETATKTGRHEKEGWRLRKNGTLIWTRVILDAIR
HHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCEEHHHHHHHHHC
DPDDNLIGFAEIVRDLSDDYGLPDDMREPAPASPMGE
CCCCCEEEHHHHHHHHHHCCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MEPEDRYNASLTDEGHYRILLDAVPECAIYMMNTEGVVVSWNEGAQRLLGYETKEIVGEN
CCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEECCHHHHHHHCCCHHHHHCCC
FSCFYASSDNQAELPRQSLAIASKERKFTGQCWQKRKNGTRFWAEIVIFPIRNPLGPLVG
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHH
YAKITRDISEIRAVREALWRCEERFRLLVEGENTHGVYMLDPKGEISTWNTAAEQIHGYT
HHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHCCCC
ADEIVGENFSRFYTEADRAAGLPRQVLETATKTGRHEKEGWRLRKNGTLIWTRVILDAIR
HHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCEEHHHHHHHHHC
DPDDNLIGFAEIVRDLSDDYGLPDDMREPAPASPMGE
CCCCCEEEHHHHHHHHHHCCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA