| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is cysT [H]
Identifier: 158425357
GI number: 158425357
Start: 4285378
End: 4286199
Strand: Direct
Name: cysT [H]
Synonym: AZC_3733
Alternate gene names: 158425357
Gene position: 4285378-4286199 (Clockwise)
Preceding gene: 158425356
Following gene: 158425358
Centisome position: 79.81
GC content: 67.27
Gene sequence:
>822_bases ATGTCCAGCGTCATTCCGGGCTTCCGCCTCTCCTTCGGCATCACCCTCACCTATCTCTGCCTCATCGTGCTGCTGCCGGT AGCGGCGCTGCTGCTCCAGGCGGCGGATGTAGGGCTTGCCCGCTACATCGCCATCATGACGTCGCCGCGCACGCTCGCCT CCTTTCAGGTGACGTTCACAACCGCCGCCATCGCCACGGCCTTCAACGCCATCTATGGCCTCGCGCTCGCCTGGGTGCTG GTGCGCTATGAGTTTCCCGGAAAGCGCCTTTTGGATGCGCTGGTGGACGTGCCCTTTGCGCTGCCGACCGCCGTGGCAGG CCTCGCGCTCACCGCCATCTTCGCCAAGAACGGCTGGTATGGCGCGCAGCTGGCCCAGTGGGGCATTCAGGTGGCCTATG CGCCGGCCGGCATTGCCTGCGCCATGGCTTTCACCTCCATCCCCTTCGTGGTGCGCACCGTCCAGCCGGTGCTGGAGGAT CTCGCCGGAGACGTGGAGGAGGCCGCCACCACGCTGGGCGCCTCCGATTTCCGCGTCTTCCGCACGGTGATCCTGCCGGC TCTGTTTCCAGCCTTCCTCGCCGGCTGCTCGCTTGCCTTCGCCCGCTCCCTGGGGGAGTTCGGCGCGGTGGTGTTCATCG CCGGCAACCAGCCCTTCCGCACCGAGATCGTGGCGCTCCTCGCCTTCATCCGGCTGGAGGAATACGACTATCCGGCCGCC GCCGCGATTGCCGCCACCATGCTCGGCCTCGCGTTTCTCCTGCTGCTGACGGTGAACGCCATTCAGGCCTGGCACCAGCG CCGCGCGATCCGGGAGGACTGA
Upstream 100 bases:
>100_bases ACCAGAGAGAGACCGCTCGCCCGTGACCCGTTCCGTGCCTCCGACGTCTCCTCTCCCGCCGCCCGGGGGCCGCATGGCCC AGCCCGAAGCCTGAGGCACC
Downstream 100 bases:
>100_bases TCCCATGTCGGACACCTCCACCCGCCGCCGCGTCGGCGACGGCCCGCTCGCCCGCCGCCTCATCATCGGCCTCGTGCTGC TGGTTACGGTGCTCGTTCTG
Product: sulfate ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSSVIPGFRLSFGITLTYLCLIVLLPVAALLLQAADVGLARYIAIMTSPRTLASFQVTFTTAAIATAFNAIYGLALAWVL VRYEFPGKRLLDALVDVPFALPTAVAGLALTAIFAKNGWYGAQLAQWGIQVAYAPAGIACAMAFTSIPFVVRTVQPVLED LAGDVEEAATTLGASDFRVFRTVILPALFPAFLAGCSLAFARSLGEFGAVVFIAGNQPFRTEIVALLAFIRLEEYDYPAA AAIAATMLGLAFLLLLTVNAIQAWHQRRAIRED
Sequences:
>Translated_273_residues MSSVIPGFRLSFGITLTYLCLIVLLPVAALLLQAADVGLARYIAIMTSPRTLASFQVTFTTAAIATAFNAIYGLALAWVL VRYEFPGKRLLDALVDVPFALPTAVAGLALTAIFAKNGWYGAQLAQWGIQVAYAPAGIACAMAFTSIPFVVRTVQPVLED LAGDVEEAATTLGASDFRVFRTVILPALFPAFLAGCSLAFARSLGEFGAVVFIAGNQPFRTEIVALLAFIRLEEYDYPAA AAIAATMLGLAFLLLLTVNAIQAWHQRRAIRED >Mature_272_residues SSVIPGFRLSFGITLTYLCLIVLLPVAALLLQAADVGLARYIAIMTSPRTLASFQVTFTTAAIATAFNAIYGLALAWVLV RYEFPGKRLLDALVDVPFALPTAVAGLALTAIFAKNGWYGAQLAQWGIQVAYAPAGIACAMAFTSIPFVVRTVQPVLEDL AGDVEEAATTLGASDFRVFRTVILPALFPAFLAGCSLAFARSLGEFGAVVFIAGNQPFRTEIVALLAFIRLEEYDYPAAA AIAATMLGLAFLLLLTVNAIQAWHQRRAIRED
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=267, Percent_Identity=54.6816479400749, Blast_Score=270, Evalue=1e-73, Organism=Escherichia coli, GI87082099, Length=266, Percent_Identity=34.2105263157895, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1786980, Length=181, Percent_Identity=39.2265193370166, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1787369, Length=202, Percent_Identity=25.7425742574257, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787368, Length=215, Percent_Identity=28.3720930232558, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1786254, Length=221, Percent_Identity=27.1493212669683, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29169; Mature: 29037
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVIPGFRLSFGITLTYLCLIVLLPVAALLLQAADVGLARYIAIMTSPRTLASFQVTFT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEHHHH TAAIATAFNAIYGLALAWVLVRYEFPGKRLLDALVDVPFALPTAVAGLALTAIFAKNGWY HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC GAQLAQWGIQVAYAPAGIACAMAFTSIPFVVRTVQPVLEDLAGDVEEAATTLGASDFRVF HHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHH RTVILPALFPAFLAGCSLAFARSLGEFGAVVFIAGNQPFRTEIVALLAFIRLEEYDYPAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHH AAIAATMLGLAFLLLLTVNAIQAWHQRRAIRED HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSVIPGFRLSFGITLTYLCLIVLLPVAALLLQAADVGLARYIAIMTSPRTLASFQVTFT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEHHHH TAAIATAFNAIYGLALAWVLVRYEFPGKRLLDALVDVPFALPTAVAGLALTAIFAKNGWY HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC GAQLAQWGIQVAYAPAGIACAMAFTSIPFVVRTVQPVLEDLAGDVEEAATTLGASDFRVF HHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHH RTVILPALFPAFLAGCSLAFARSLGEFGAVVFIAGNQPFRTEIVALLAFIRLEEYDYPAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHH AAIAATMLGLAFLLLLTVNAIQAWHQRRAIRED HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]