| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is cysW [H]
Identifier: 158425358
GI number: 158425358
Start: 4286204
End: 4287070
Strand: Direct
Name: cysW [H]
Synonym: AZC_3734
Alternate gene names: 158425358
Gene position: 4286204-4287070 (Clockwise)
Preceding gene: 158425357
Following gene: 158425360
Centisome position: 79.82
GC content: 68.63
Gene sequence:
>867_bases ATGTCGGACACCTCCACCCGCCGCCGCGTCGGCGACGGCCCGCTCGCCCGCCGCCTCATCATCGGCCTCGTGCTGCTGGT TACGGTGCTCGTTCTGCTGGTGCCGCTCGCCTCCATCTTCACGGAAGCTTTCCAGCGCGGGGTACCCGCCTATTTCGCCG CGCTGTCGCAGCCGGACACGCTGCACGCCATGGGGCTCACGGCCTTCACGGCACTGGTCTGCGTGCCCGTCAATGTGATC TTCGGCATCGCCGCCGCCTGGACGGTGGCGAAGTTCACCTTTCCCGGCCGTGGCCTGCTGCTGGCGCTGATCGAGCTGCC CTTTTCCATCTCGCCCATCGTGGCGGGCGTCGCCTATCTCTTCGTCTATGGCGCGCAGGGGCTGCTCGGGCCGTTTCTGG AAGCCTACGACATCAAGATCATGTTCGCCGTGCCGGCGATCATCCTCGCCAGCCTGTTCGTCACCGCGCCGTTCGTCGCC CGCGAAATCGTGCCGCTGATGATGGCGCAGGGGCGCGAGGAGGAAGAGGCGGCGGTGACGCTCGGCGCCTCCGGCTGGCG CATCCTGCGCACCGTCACGCTGCCCAACGTGCGCTTCGCGTTGCTCTATGGCGCGGCGCTCTGCAACGCCCGAGTGATGG GCGAGTTCGGCGCCGTCTCGGTGGTGTCCGGCAATATCCGGGGCCGCACCTCCACCCTGCCGCTCCAGATCGAGCTGCTC TATCAGGACAGCCAGGTGGCCGGCGCTTTTGCCGCCGCCACCGTTCTGGCGGGCGTCGCCCTCGTCACGCTGGTCGCCAA GCTCATCATCGAGCGCCTCGACGCCGAGCGCGAGCGGCTGAACGTGAAGCGGGGCGTCGGCCACTGA
Upstream 100 bases:
>100_bases ATTGCCGCCACCATGCTCGGCCTCGCGTTTCTCCTGCTGCTGACGGTGAACGCCATTCAGGCCTGGCACCAGCGCCGCGC GATCCGGGAGGACTGATCCC
Downstream 100 bases:
>100_bases GCCCGCTCACGCGGTGATGGCCACCGGCAAGCCATAGCGGTCGCGCTCGGGCGGATCGGGAAAGACCAGCGCCGCCCCGC GGGCGATGCGAGCCGCTGTC
Product: sulfate ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSDTSTRRRVGDGPLARRLIIGLVLLVTVLVLLVPLASIFTEAFQRGVPAYFAALSQPDTLHAMGLTAFTALVCVPVNVI FGIAAAWTVAKFTFPGRGLLLALIELPFSISPIVAGVAYLFVYGAQGLLGPFLEAYDIKIMFAVPAIILASLFVTAPFVA REIVPLMMAQGREEEEAAVTLGASGWRILRTVTLPNVRFALLYGAALCNARVMGEFGAVSVVSGNIRGRTSTLPLQIELL YQDSQVAGAFAAATVLAGVALVTLVAKLIIERLDAERERLNVKRGVGH
Sequences:
>Translated_288_residues MSDTSTRRRVGDGPLARRLIIGLVLLVTVLVLLVPLASIFTEAFQRGVPAYFAALSQPDTLHAMGLTAFTALVCVPVNVI FGIAAAWTVAKFTFPGRGLLLALIELPFSISPIVAGVAYLFVYGAQGLLGPFLEAYDIKIMFAVPAIILASLFVTAPFVA REIVPLMMAQGREEEEAAVTLGASGWRILRTVTLPNVRFALLYGAALCNARVMGEFGAVSVVSGNIRGRTSTLPLQIELL YQDSQVAGAFAAATVLAGVALVTLVAKLIIERLDAERERLNVKRGVGH >Mature_287_residues SDTSTRRRVGDGPLARRLIIGLVLLVTVLVLLVPLASIFTEAFQRGVPAYFAALSQPDTLHAMGLTAFTALVCVPVNVIF GIAAAWTVAKFTFPGRGLLLALIELPFSISPIVAGVAYLFVYGAQGLLGPFLEAYDIKIMFAVPAIILASLFVTAPFVAR EIVPLMMAQGREEEEAAVTLGASGWRILRTVTLPNVRFALLYGAALCNARVMGEFGAVSVVSGNIRGRTSTLPLQIELLY QDSQVAGAFAAATVLAGVALVTLVAKLIIERLDAERERLNVKRGVGH
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=291, Percent_Identity=48.7972508591065, Blast_Score=296, Evalue=8e-82, Organism=Escherichia coli, GI1788764, Length=212, Percent_Identity=36.3207547169811, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1786980, Length=228, Percent_Identity=30.7017543859649, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30664; Mature: 30533
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTSTRRRVGDGPLARRLIIGLVLLVTVLVLLVPLASIFTEAFQRGVPAYFAALSQPDT CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCH LHAMGLTAFTALVCVPVNVIFGIAAAWTVAKFTFPGRGLLLALIELPFSISPIVAGVAYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHH FVYGAQGLLGPFLEAYDIKIMFAVPAIILASLFVTAPFVAREIVPLMMAQGREEEEAAVT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEE LGASGWRILRTVTLPNVRFALLYGAALCNARVMGEFGAVSVVSGNIRGRTSTLPLQIELL ECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEE YQDSQVAGAFAAATVLAGVALVTLVAKLIIERLDAERERLNVKRGVGH EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC >Mature Secondary Structure SDTSTRRRVGDGPLARRLIIGLVLLVTVLVLLVPLASIFTEAFQRGVPAYFAALSQPDT CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCH LHAMGLTAFTALVCVPVNVIFGIAAAWTVAKFTFPGRGLLLALIELPFSISPIVAGVAYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHH FVYGAQGLLGPFLEAYDIKIMFAVPAIILASLFVTAPFVAREIVPLMMAQGREEEEAAVT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEE LGASGWRILRTVTLPNVRFALLYGAALCNARVMGEFGAVSVVSGNIRGRTSTLPLQIELL ECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEE YQDSQVAGAFAAATVLAGVALVTLVAKLIIERLDAERERLNVKRGVGH EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]