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The map label for this gene is 158425345

Identifier: 158425345

GI number: 158425345

Start: 4270550

End: 4272493

Strand: Reverse

Name: 158425345

Synonym: AZC_3721

Alternate gene names: NA

Gene position: 4272493-4270550 (Counterclockwise)

Preceding gene: 158425347

Following gene: 158425344

Centisome position: 79.57

GC content: 66.1

Gene sequence:

>1944_bases
GTGGTACGGTCCCTTGCCGTCTCAGAGCCCGATGCGGTCAGGCTGAGGCTGCCCGCGGTCAGGATTGAGGGGCCGGCGTG
CAGCGTTCGACGGTTCGATCGGAATGCGGCCGATCGGAACGCCGGTTGGGACGGGGTCAGGTCTTTCCTCTTGCGAAAGC
GTGCGCCCGTGACGGAACCACCGATCTCCCAGAAGCGGCGTTTTCAGCTCATTCTGATCAAGCCGTCCCATTATGACGAT
GACGGCTATGTGATCCGCTGGTGGCGGGCGATGATCCCGTCCAACACGCTGGCCGCGCTCTATGGCATCGCTTCCGATTG
CGCCGCCCGGCGGGTGCTCGGGCCGGACGTGGACATCGACATCCTCGCCATCGACGAGACCAATACCCGCATCGACATTC
CCCGGCTGATCGCCCGGCTTGAGGAAGCCGGCGGCTTCGGCCTCGTGGCCCTCGTGGGCGTGCAGTCGAACCAGTATCCG
CGCGCCCTCGACATCGCCCGGCCGTTCCGGGCGGCGGGCCTGCCGGTGATGATGGGCGGCTTCCACGTCTCCGGCTGCCT
CGCCATGCTGGATGGCCATGCGGTTGGGCTCGATGCCTGCCGCGAGATGGGCATCTCCATGTTCGCGGGAGAGGCGGAGG
GCCGGCTCGATCAGGTGTTGCACGATGCCGCCTCGGGCACGCTCGAGCCGCTCTACAATTTCATGAACGACCTGCCCGGC
ATCGGCGGCACGCCCGTGCCCTTCCTGCCCAAGACCTATGTGAGCCGCACCCTCGGCCTCAGCAGCAGTTTCGATGCCGG
GCGGGGCTGCCCCTACCAGTGCTCCTTCTGCACCATCATCAATGTGCAGGGACGCCAGTCGCGCTTCCGCTCCGCCGACG
ACGTGGAGGACCTGGTCCGCCGCAACTGGGCACAGGGCATCAGCAAGTTTTTCATCACCGACGACAATTTCGCCCGCAAC
CGCGACTGGGAAGCGATCTTCGACCGGCTCATCGCGCTGAAGGAGCAGGAGCGCATCCCGCTGGGGCTGATGATCCAGGT
GGACACGCTGTGCCACAACATCCCGAACTTCATCGAGAAGGCCAAGCGCGCCGGGGTGACGCGCGTCTTCATCGGCCTCG
AGAACATCAATCCGGACAATCTGGCCGAGGCCAAGAAGCGGCAGAACAAGATCACCGAATATCGCAAGATGCTGCTGGCC
TGGAAGGCGCAGGGCATCATCACCATCGCCGGCTACATCCTCGGCTTCCCGGCGGACACGCCTGAAAGCATCCGGCGCGA
CATCGGCATCATCCAGCGGGAGCTGCCGCTCGACATCGTCGAGTTCTTCTGCCTGACACCCCTGCCGGGCTCGGAAGATC
ACCAGAAGCTCTGGCGCGCCAAGGTGCCCATGGATGGCGATCTCAACATCTATGACGTGGAACACGTCTGCACAGCGCAC
GCCGCGATGAGCAAGACGGAGTGGGAGGCGATCTATCAGGAAGCCTGGGCGCTCTATTACAGTCCCGCCCACATGCGCAC
CCTGATGCGGCGGGCGGTGGCCACGGGCGTGTCCGTGTCCAGCCTCGTGAAGCTGCTGGTCACCTTCTCCACCGCAGTCC
CCATCGAGAAGGTGCACCCGCTCCAGGCGGGGATCCTGCGCCTGCGCCATCCCGCAGAGCGGCGGCCGGACCTGTCCCGC
GAACCCGCGCTCGCCTTCTGGCTTCGTTTCCTGTGGCAGACGCTCCGGCGCAATGCGGCGGTGGTTGGCCGCATCGCCGG
CCTCATGCTCATGGCCCGCTCGGTGCTCAAGGAGAAGGGGGTGGGCGCCTATCACGATCAGGCCCTGACGCCGGTCGGGG
CGGAGGACGACGGTCTCGATCTCCTCACCAAGACCAGCGGCGGCCAGAAGGCCGTGGCCCATGCCCGCAAGGTGGCGCAG
CTCACGCACGGCCCCGCGGCCTGA

Upstream 100 bases:

>100_bases
TGCGCAAGGCGGTCCTCGCTCCAGCGTGCGGTTAAGTCCCGGAGCGCACAGGGTGCTGCGCCACGTTGCGTTGCGGAAAC
AGAGACAGGGCTAATCAGGG

Downstream 100 bases:

>100_bases
AGGCGGTCCGTCCAAGAGGGTGACGGAGACGGTGGCCTCCCGGAAGGGAATCGAACCCCTGACCCCAGGTTTAGGAAACC
TGTGCTCTATCCTGCTGAGC

Product: elongator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 647; Mature: 647

Protein sequence:

>647_residues
MVRSLAVSEPDAVRLRLPAVRIEGPACSVRRFDRNAADRNAGWDGVRSFLLRKRAPVTEPPISQKRRFQLILIKPSHYDD
DGYVIRWWRAMIPSNTLAALYGIASDCAARRVLGPDVDIDILAIDETNTRIDIPRLIARLEEAGGFGLVALVGVQSNQYP
RALDIARPFRAAGLPVMMGGFHVSGCLAMLDGHAVGLDACREMGISMFAGEAEGRLDQVLHDAASGTLEPLYNFMNDLPG
IGGTPVPFLPKTYVSRTLGLSSSFDAGRGCPYQCSFCTIINVQGRQSRFRSADDVEDLVRRNWAQGISKFFITDDNFARN
RDWEAIFDRLIALKEQERIPLGLMIQVDTLCHNIPNFIEKAKRAGVTRVFIGLENINPDNLAEAKKRQNKITEYRKMLLA
WKAQGIITIAGYILGFPADTPESIRRDIGIIQRELPLDIVEFFCLTPLPGSEDHQKLWRAKVPMDGDLNIYDVEHVCTAH
AAMSKTEWEAIYQEAWALYYSPAHMRTLMRRAVATGVSVSSLVKLLVTFSTAVPIEKVHPLQAGILRLRHPAERRPDLSR
EPALAFWLRFLWQTLRRNAAVVGRIAGLMLMARSVLKEKGVGAYHDQALTPVGAEDDGLDLLTKTSGGQKAVAHARKVAQ
LTHGPAA

Sequences:

>Translated_647_residues
MVRSLAVSEPDAVRLRLPAVRIEGPACSVRRFDRNAADRNAGWDGVRSFLLRKRAPVTEPPISQKRRFQLILIKPSHYDD
DGYVIRWWRAMIPSNTLAALYGIASDCAARRVLGPDVDIDILAIDETNTRIDIPRLIARLEEAGGFGLVALVGVQSNQYP
RALDIARPFRAAGLPVMMGGFHVSGCLAMLDGHAVGLDACREMGISMFAGEAEGRLDQVLHDAASGTLEPLYNFMNDLPG
IGGTPVPFLPKTYVSRTLGLSSSFDAGRGCPYQCSFCTIINVQGRQSRFRSADDVEDLVRRNWAQGISKFFITDDNFARN
RDWEAIFDRLIALKEQERIPLGLMIQVDTLCHNIPNFIEKAKRAGVTRVFIGLENINPDNLAEAKKRQNKITEYRKMLLA
WKAQGIITIAGYILGFPADTPESIRRDIGIIQRELPLDIVEFFCLTPLPGSEDHQKLWRAKVPMDGDLNIYDVEHVCTAH
AAMSKTEWEAIYQEAWALYYSPAHMRTLMRRAVATGVSVSSLVKLLVTFSTAVPIEKVHPLQAGILRLRHPAERRPDLSR
EPALAFWLRFLWQTLRRNAAVVGRIAGLMLMARSVLKEKGVGAYHDQALTPVGAEDDGLDLLTKTSGGQKAVAHARKVAQ
LTHGPAA
>Mature_647_residues
MVRSLAVSEPDAVRLRLPAVRIEGPACSVRRFDRNAADRNAGWDGVRSFLLRKRAPVTEPPISQKRRFQLILIKPSHYDD
DGYVIRWWRAMIPSNTLAALYGIASDCAARRVLGPDVDIDILAIDETNTRIDIPRLIARLEEAGGFGLVALVGVQSNQYP
RALDIARPFRAAGLPVMMGGFHVSGCLAMLDGHAVGLDACREMGISMFAGEAEGRLDQVLHDAASGTLEPLYNFMNDLPG
IGGTPVPFLPKTYVSRTLGLSSSFDAGRGCPYQCSFCTIINVQGRQSRFRSADDVEDLVRRNWAQGISKFFITDDNFARN
RDWEAIFDRLIALKEQERIPLGLMIQVDTLCHNIPNFIEKAKRAGVTRVFIGLENINPDNLAEAKKRQNKITEYRKMLLA
WKAQGIITIAGYILGFPADTPESIRRDIGIIQRELPLDIVEFFCLTPLPGSEDHQKLWRAKVPMDGDLNIYDVEHVCTAH
AAMSKTEWEAIYQEAWALYYSPAHMRTLMRRAVATGVSVSSLVKLLVTFSTAVPIEKVHPLQAGILRLRHPAERRPDLSR
EPALAFWLRFLWQTLRRNAAVVGRIAGLMLMARSVLKEKGVGAYHDQALTPVGAEDDGLDLLTKTSGGQKAVAHARKVAQ
LTHGPAA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 71829; Mature: 71829

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRSLAVSEPDAVRLRLPAVRIEGPACSVRRFDRNAADRNAGWDGVRSFLLRKRAPVTEP
CCCCCCCCCCCCEEEEECEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PISQKRRFQLILIKPSHYDDDGYVIRWWRAMIPSNTLAALYGIASDCAARRVLGPDVDID
CCCCCCCEEEEEECCCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEE
ILAIDETNTRIDIPRLIARLEEAGGFGLVALVGVQSNQYPRALDIARPFRAAGLPVMMGG
EEEECCCCCEECHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHCCHHHCCCCEEECC
FHVSGCLAMLDGHAVGLDACREMGISMFAGEAEGRLDQVLHDAASGTLEPLYNFMNDLPG
CHHHHHHHHHCCCCCCHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC
IGGTPVPFLPKTYVSRTLGLSSSFDAGRGCPYQCSFCTIINVQGRQSRFRSADDVEDLVR
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCHHHHCCCCCCHHHHHH
RNWAQGISKFFITDDNFARNRDWEAIFDRLIALKEQERIPLGLMIQVDTLCHNIPNFIEK
HHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHH
AKRAGVTRVFIGLENINPDNLAEAKKRQNKITEYRKMLLAWKAQGIITIAGYILGFPADT
HHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCC
PESIRRDIGIIQRELPLDIVEFFCLTPLPGSEDHQKLWRAKVPMDGDLNIYDVEHVCTAH
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHH
AAMSKTEWEAIYQEAWALYYSPAHMRTLMRRAVATGVSVSSLVKLLVTFSTAVPIEKVHP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCH
LQAGILRLRHPAERRPDLSREPALAFWLRFLWQTLRRNAAVVGRIAGLMLMARSVLKEKG
HHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
VGAYHDQALTPVGAEDDGLDLLTKTSGGQKAVAHARKVAQLTHGPAA
CCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVRSLAVSEPDAVRLRLPAVRIEGPACSVRRFDRNAADRNAGWDGVRSFLLRKRAPVTEP
CCCCCCCCCCCCEEEEECEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PISQKRRFQLILIKPSHYDDDGYVIRWWRAMIPSNTLAALYGIASDCAARRVLGPDVDID
CCCCCCCEEEEEECCCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEE
ILAIDETNTRIDIPRLIARLEEAGGFGLVALVGVQSNQYPRALDIARPFRAAGLPVMMGG
EEEECCCCCEECHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHCCHHHCCCCEEECC
FHVSGCLAMLDGHAVGLDACREMGISMFAGEAEGRLDQVLHDAASGTLEPLYNFMNDLPG
CHHHHHHHHHCCCCCCHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC
IGGTPVPFLPKTYVSRTLGLSSSFDAGRGCPYQCSFCTIINVQGRQSRFRSADDVEDLVR
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCHHHHCCCCCCHHHHHH
RNWAQGISKFFITDDNFARNRDWEAIFDRLIALKEQERIPLGLMIQVDTLCHNIPNFIEK
HHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHH
AKRAGVTRVFIGLENINPDNLAEAKKRQNKITEYRKMLLAWKAQGIITIAGYILGFPADT
HHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCC
PESIRRDIGIIQRELPLDIVEFFCLTPLPGSEDHQKLWRAKVPMDGDLNIYDVEHVCTAH
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHH
AAMSKTEWEAIYQEAWALYYSPAHMRTLMRRAVATGVSVSSLVKLLVTFSTAVPIEKVHP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCH
LQAGILRLRHPAERRPDLSREPALAFWLRFLWQTLRRNAAVVGRIAGLMLMARSVLKEKG
HHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
VGAYHDQALTPVGAEDDGLDLLTKTSGGQKAVAHARKVAQLTHGPAA
CCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]