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The map label for this gene is yfgC [C]

Identifier: 158425344

GI number: 158425344

Start: 4268207

End: 4269724

Strand: Reverse

Name: yfgC [C]

Synonym: AZC_3720

Alternate gene names: 158425344

Gene position: 4269724-4268207 (Counterclockwise)

Preceding gene: 158425345

Following gene: 158425343

Centisome position: 79.51

GC content: 67.79

Gene sequence:

>1518_bases
GTGACGTCGGCCACGGCAAGGGAGAAGGGCAGGGGCCTCGTGCGGGCCCGCGTCGCGCGCGCGGGGCGCTCGACCTGTGC
CATGCTCACGCTTGTCGGTCTGCTCACGGGATGCGCCGGGGTCGATCTCGACCGCTCCACCGTGCCGCTCACCCAGTCCA
AGCTTTCCGCTGCCGACACCGCGGACATGAGCCCGGCGCAGCGCCGCGAGCATGAGCGTCTCGTGGCGAGCTATGGCGGG
GCCTATGACGATCCCGAGCTGAAGGCGCTGATCCAGCAGGTGGTGGAGCGTCTGGTCGCGGCCTCCGAGCGCCCGGACCT
GAAATATCGCGTCACCGTCCTCAATTCGCCCGCCATCAACGCCTTCGCACTGCCCGACGGCTCGCTCTATGTGACGCGCG
GCCTGCTGGCGCTCGCCAACGACACGTCCGAAATGTCGTCCGTGCTCGCCCATGAGATGGCCCACGTGATCGCCCGCCAT
GCCTCCATCCGCGAGGATCAGGTGAAGCAGGCCGTGCTGGTGAGCCGCGTCATCTCCGACGTGGTGGCGGACCAGAACAT
GGGCGCCCTCGCCATGCAGAAGAGCCGGCAGACGCTGGCCACCTTCTCGCGCGGACAGGAACTGGAGGCGGACGCCATCG
GCGTGGGCATCGCCGCGCGCGCGGGATTTGATCCCTATGGCGCCTCGCGCTTCCTCACTGACATGGGCAAACAGGCGAGC
CTGCGCACCAGCGCCTTCGGCGGCGCATCGTCCACGACGCCGGACATGGACTTCCTTGCCACCCATCCGGCGACGCCCGA
CCGCATCTCCATCGCCATCGCCAATGCGCGCGAATATGCGGCGCCGGGTGCGGGCGAGCGGGACAAGGCGGCCTATCTCG
CCGCCATCGATGGCATGGTCTATGGCGACGATCCCAAGGAAGGCTATGTGCGGGGGCGGAACTTTTTCCATCCCAAGCTC
GGCTTCACCTTCACCGCGCCCGAGGGCTTCTCGCTGGAGAACACCTCCCAGGCGGTCCTGGGCGCCACGGCCAACGGATC
CGAGGCGCTGCGGCTCGATGCGGTGCGCGTGTCCGGCGACCAGAGCCTTGGCCAGTATCTCGCCTCCGGCTGGATCGATG
GGGTCGAGATCAATTCGGTGGAGAGTCTGTCGGTCAACGGCTTTACGGCCGCGACGGCGGTGGCGCGCGGCGACCAGTGG
TCGTTCCGCATGTTCGCCATCCGCTTCGGCTCGGACGTCTATCGCCTGATCTTCGCCGCCCGCAACCTGACGCCGGAACT
CGACAAGCAGTTCCGCGCCGCCGCCTCGACCTTCCGGCGGGTGGCAAGCGACGAGGCCCAGTCCGTGAAGCCGCTGCGCA
TCCGCATCGTGACGGTGGGGATCGGCGATACGGTGGAGAAGATGGCGGGCCGCATGCAGGTGGCGGACCATCCCATGGAA
CGCTTCCTGATCCTCAACGGCCTCGATCGCGACGCCAAGCTCGCCTACGGGAGCAAGGTGAAGATCGTCGTCGAATAG

Upstream 100 bases:

>100_bases
GCGCGAGCCGGGGCTCGGTTCGCGAAGGGCTTTGCGGGCGCTGGGGCAGCGTCGCGTGGTCCGCATGTGAGATGGACGTT
CGGCTGGGAGAGAGGACGCG

Downstream 100 bases:

>100_bases
CGGCACGGGCGTTCGTAGCCCCTGGGCACCGCCGGTGCCGATCCGAAAACGACGGAAAAGCGGCGCAGGGGCATCCAAAT
GCTGCCGCGAACCCTTGCGG

Product: peptidase M48 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MTSATAREKGRGLVRARVARAGRSTCAMLTLVGLLTGCAGVDLDRSTVPLTQSKLSAADTADMSPAQRREHERLVASYGG
AYDDPELKALIQQVVERLVAASERPDLKYRVTVLNSPAINAFALPDGSLYVTRGLLALANDTSEMSSVLAHEMAHVIARH
ASIREDQVKQAVLVSRVISDVVADQNMGALAMQKSRQTLATFSRGQELEADAIGVGIAARAGFDPYGASRFLTDMGKQAS
LRTSAFGGASSTTPDMDFLATHPATPDRISIAIANAREYAAPGAGERDKAAYLAAIDGMVYGDDPKEGYVRGRNFFHPKL
GFTFTAPEGFSLENTSQAVLGATANGSEALRLDAVRVSGDQSLGQYLASGWIDGVEINSVESLSVNGFTAATAVARGDQW
SFRMFAIRFGSDVYRLIFAARNLTPELDKQFRAAASTFRRVASDEAQSVKPLRIRIVTVGIGDTVEKMAGRMQVADHPME
RFLILNGLDRDAKLAYGSKVKIVVE

Sequences:

>Translated_505_residues
MTSATAREKGRGLVRARVARAGRSTCAMLTLVGLLTGCAGVDLDRSTVPLTQSKLSAADTADMSPAQRREHERLVASYGG
AYDDPELKALIQQVVERLVAASERPDLKYRVTVLNSPAINAFALPDGSLYVTRGLLALANDTSEMSSVLAHEMAHVIARH
ASIREDQVKQAVLVSRVISDVVADQNMGALAMQKSRQTLATFSRGQELEADAIGVGIAARAGFDPYGASRFLTDMGKQAS
LRTSAFGGASSTTPDMDFLATHPATPDRISIAIANAREYAAPGAGERDKAAYLAAIDGMVYGDDPKEGYVRGRNFFHPKL
GFTFTAPEGFSLENTSQAVLGATANGSEALRLDAVRVSGDQSLGQYLASGWIDGVEINSVESLSVNGFTAATAVARGDQW
SFRMFAIRFGSDVYRLIFAARNLTPELDKQFRAAASTFRRVASDEAQSVKPLRIRIVTVGIGDTVEKMAGRMQVADHPME
RFLILNGLDRDAKLAYGSKVKIVVE
>Mature_504_residues
TSATAREKGRGLVRARVARAGRSTCAMLTLVGLLTGCAGVDLDRSTVPLTQSKLSAADTADMSPAQRREHERLVASYGGA
YDDPELKALIQQVVERLVAASERPDLKYRVTVLNSPAINAFALPDGSLYVTRGLLALANDTSEMSSVLAHEMAHVIARHA
SIREDQVKQAVLVSRVISDVVADQNMGALAMQKSRQTLATFSRGQELEADAIGVGIAARAGFDPYGASRFLTDMGKQASL
RTSAFGGASSTTPDMDFLATHPATPDRISIAIANAREYAAPGAGERDKAAYLAAIDGMVYGDDPKEGYVRGRNFFHPKLG
FTFTAPEGFSLENTSQAVLGATANGSEALRLDAVRVSGDQSLGQYLASGWIDGVEINSVESLSVNGFTAATAVARGDQWS
FRMFAIRFGSDVYRLIFAARNLTPELDKQFRAAASTFRRVASDEAQSVKPLRIRIVTVGIGDTVEKMAGRMQVADHPMER
FLILNGLDRDAKLAYGSKVKIVVE

Specific function: Unknown

COG id: COG4784

COG function: function code R; Putative Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=199, Percent_Identity=31.1557788944724, Blast_Score=86, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6322940, Length=176, Percent_Identity=32.9545454545455, Blast_Score=74, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 54117; Mature: 53986

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSATAREKGRGLVRARVARAGRSTCAMLTLVGLLTGCAGVDLDRSTVPLTQSKLSAADT
CCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCC
ADMSPAQRREHERLVASYGGAYDDPELKALIQQVVERLVAASERPDLKYRVTVLNSPAIN
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCE
AFALPDGSLYVTRGLLALANDTSEMSSVLAHEMAHVIARHASIREDQVKQAVLVSRVISD
EEECCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VVADQNMGALAMQKSRQTLATFSRGQELEADAIGVGIAARAGFDPYGASRFLTDMGKQAS
HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHCCCCCC
LRTSAFGGASSTTPDMDFLATHPATPDRISIAIANAREYAAPGAGERDKAAYLAAIDGMV
CHHHCCCCCCCCCCCCHHEECCCCCCCEEEEEEECCHHHCCCCCCCCCHHHEEEEECCEE
YGDDPKEGYVRGRNFFHPKLGFTFTAPEGFSLENTSQAVLGATANGSEALRLDAVRVSGD
ECCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCC
QSLGQYLASGWIDGVEINSVESLSVNGFTAATAVARGDQWSFRMFAIRFGSDVYRLIFAA
HHHHHHHHHCCCCCEEECCCCEEECCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHH
RNLTPELDKQFRAAASTFRRVASDEAQSVKPLRIRIVTVGIGDTVEKMAGRMQVADHPME
HCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEEEEECCHHHHHHHCCHHHHCCCHH
RFLILNGLDRDAKLAYGSKVKIVVE
HHHEECCCCCCCEEECCCEEEEEEC
>Mature Secondary Structure 
TSATAREKGRGLVRARVARAGRSTCAMLTLVGLLTGCAGVDLDRSTVPLTQSKLSAADT
CCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCC
ADMSPAQRREHERLVASYGGAYDDPELKALIQQVVERLVAASERPDLKYRVTVLNSPAIN
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCE
AFALPDGSLYVTRGLLALANDTSEMSSVLAHEMAHVIARHASIREDQVKQAVLVSRVISD
EEECCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VVADQNMGALAMQKSRQTLATFSRGQELEADAIGVGIAARAGFDPYGASRFLTDMGKQAS
HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHCCCCCC
LRTSAFGGASSTTPDMDFLATHPATPDRISIAIANAREYAAPGAGERDKAAYLAAIDGMV
CHHHCCCCCCCCCCCCHHEECCCCCCCEEEEEEECCHHHCCCCCCCCCHHHEEEEECCEE
YGDDPKEGYVRGRNFFHPKLGFTFTAPEGFSLENTSQAVLGATANGSEALRLDAVRVSGD
ECCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCC
QSLGQYLASGWIDGVEINSVESLSVNGFTAATAVARGDQWSFRMFAIRFGSDVYRLIFAA
HHHHHHHHHCCCCCEEECCCCEEECCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHH
RNLTPELDKQFRAAASTFRRVASDEAQSVKPLRIRIVTVGIGDTVEKMAGRMQVADHPME
HCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEEEEECCHHHHHHHCCHHHHCCCHH
RFLILNGLDRDAKLAYGSKVKIVVE
HHHEECCCCCCCEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]