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The map label for this gene is mcp4 [H]

Identifier: 158425342

GI number: 158425342

Start: 4264578

End: 4265972

Strand: Reverse

Name: mcp4 [H]

Synonym: AZC_3718

Alternate gene names: 158425342

Gene position: 4265972-4264578 (Counterclockwise)

Preceding gene: 158425343

Following gene: 158425341

Centisome position: 79.44

GC content: 67.53

Gene sequence:

>1395_bases
GTGGGCCAAGGCAAGCCTGGCACCAGCCTCGCCCCTCAACGATCCGCTCCAACGACGGCAGTCGCCCGCTTCGTTCATTG
CATCGAGCAAGGGTTGAGGGAGGTTTTGATGGCTCTTCCAGGTTGGTCCAAATCGGCGCCTGTGGCCGAATCCTCGGATC
TCGCGCTTCTGACGGCCATCTTCGACACGCTGACCACGCCGGTCTTCGTCCGCTGCATCAAGCCGGGCGAGGAGAAGGTG
GTCTATGCCAACGGCCCCTTCCTCACGGCGATGCAGATCACCCGACGCGAGGATCTGGTGGGCAAGCCGCCGACCAACAT
CTTCGCGCCCGTGCAGCCGGGCAACCTGACGCCGGCCGCCTTCGTGAAGAGCGTCGAAGCCGGCATCAAGCGCGACGGCG
AATGGGCCGGATCCGCCATCTACCGCCGCAAGGACGGCTCGGATTTCGAGGTGATCGCCCACGTGCGACCCTTCACCTTC
CAGGGCAAGCCGCACCTTCTGGCCCAGTTGCAGGACATGAACAGCGTCGCCGCCGTCGCGCGCCGCCGCGAGGCCTTCAC
CAAGCTCGCCGACACGCTGGAAGGCGAGGTTGGCACCTCCATGGCGGCCATCGCCAATGCGGCGACCCAACTCAACAGCG
TGGTCTCGGTGCTTGCCCGTTCGGCGGCGGCCGCCGCCGGCCAGACGGACGGCCTCGTCTCCATCAATGACCGCACCGGC
TCCAGCGTCGTGAGCGTCGCGGAAGAGACGGACGGGCTCATCTCCTCCATGACCGCCATCGGCGACCAGGCCCAGCGCTC
CACGGGTATCGCCGGCAATGCCGCCCGGCAGGCTTCGGATACGCAGGAGATCGTCAACCGGCTCGTGGCCGCCGCCGAGC
GGATCGGCGACGTGGTGAAGCTGATCCAGTCCATCGCCTCCCAGACCAATCTCCTGGCGCTCAACGCCACCATCGAGGCG
GCGCGGGCCGGCGAGAGCGGCAAGGGCTTCGCGGTGGTCGCCTCCGAGGTGAAGTCGCTCGCCCAGCAGACCGCCAAGGC
GACCGAGGACATCGCGGCCCAGATCAACGACATTCAGGCCGTCACGACGCAGACGGTGGATGCCATCCGGTCCATCTCCG
GCACCATCGAGCAGATCAACGACATCTCCCGCACCATCGCCGACACGGTGCAGGTGCAGTCGGGAGCCGCCCGGCGCATC
TCCGAGAACGTCAGTCTGGCCTCCAACGGCACCCGCGACGTGGCCCATGCGGTCGCGACCGTGGCGCAGGCGGCGCAGGA
AACGTCCGGCGCCGTGGATCAGGTGCGCACCTCCGTGGACGTGGTATCGAGCCAAGCCAGCCGCCTGGAGCAGCAGGTGA
AGAGCTTCGTCGCCAACCTGCGCACGCAGTCCTGA

Upstream 100 bases:

>100_bases
CGGCCTTTTCTGTTTCCGGCTCACCGTCTCGCTCCTGCAAGTCTATGCGGCGGTATCAAAATCCGCGATTGCGGCACCGC
ACCAAATCCGCCTGCGCGAT

Downstream 100 bases:

>100_bases
TCGGCAGGCACCGCCGCAGGCGGCAAACGGAGCGGCGCCCCCGCGGCGTCGCATCCGGCGGGTGCCGCTTGCCAAGGCGG
GATGCCGCAGCTTAAGTGCG

Product: methyl-accepting chemotaxis receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MGQGKPGTSLAPQRSAPTTAVARFVHCIEQGLREVLMALPGWSKSAPVAESSDLALLTAIFDTLTTPVFVRCIKPGEEKV
VYANGPFLTAMQITRREDLVGKPPTNIFAPVQPGNLTPAAFVKSVEAGIKRDGEWAGSAIYRRKDGSDFEVIAHVRPFTF
QGKPHLLAQLQDMNSVAAVARRREAFTKLADTLEGEVGTSMAAIANAATQLNSVVSVLARSAAAAAGQTDGLVSINDRTG
SSVVSVAEETDGLISSMTAIGDQAQRSTGIAGNAARQASDTQEIVNRLVAAAERIGDVVKLIQSIASQTNLLALNATIEA
ARAGESGKGFAVVASEVKSLAQQTAKATEDIAAQINDIQAVTTQTVDAIRSISGTIEQINDISRTIADTVQVQSGAARRI
SENVSLASNGTRDVAHAVATVAQAAQETSGAVDQVRTSVDVVSSQASRLEQQVKSFVANLRTQS

Sequences:

>Translated_464_residues
MGQGKPGTSLAPQRSAPTTAVARFVHCIEQGLREVLMALPGWSKSAPVAESSDLALLTAIFDTLTTPVFVRCIKPGEEKV
VYANGPFLTAMQITRREDLVGKPPTNIFAPVQPGNLTPAAFVKSVEAGIKRDGEWAGSAIYRRKDGSDFEVIAHVRPFTF
QGKPHLLAQLQDMNSVAAVARRREAFTKLADTLEGEVGTSMAAIANAATQLNSVVSVLARSAAAAAGQTDGLVSINDRTG
SSVVSVAEETDGLISSMTAIGDQAQRSTGIAGNAARQASDTQEIVNRLVAAAERIGDVVKLIQSIASQTNLLALNATIEA
ARAGESGKGFAVVASEVKSLAQQTAKATEDIAAQINDIQAVTTQTVDAIRSISGTIEQINDISRTIADTVQVQSGAARRI
SENVSLASNGTRDVAHAVATVAQAAQETSGAVDQVRTSVDVVSSQASRLEQQVKSFVANLRTQS
>Mature_463_residues
GQGKPGTSLAPQRSAPTTAVARFVHCIEQGLREVLMALPGWSKSAPVAESSDLALLTAIFDTLTTPVFVRCIKPGEEKVV
YANGPFLTAMQITRREDLVGKPPTNIFAPVQPGNLTPAAFVKSVEAGIKRDGEWAGSAIYRRKDGSDFEVIAHVRPFTFQ
GKPHLLAQLQDMNSVAAVARRREAFTKLADTLEGEVGTSMAAIANAATQLNSVVSVLARSAAAAAGQTDGLVSINDRTGS
SVVSVAEETDGLISSMTAIGDQAQRSTGIAGNAARQASDTQEIVNRLVAAAERIGDVVKLIQSIASQTNLLALNATIEAA
RAGESGKGFAVVASEVKSLAQQTAKATEDIAAQINDIQAVTTQTVDAIRSISGTIEQINDISRTIADTVQVQSGAARRIS
ENVSLASNGTRDVAHAVATVAQAAQETSGAVDQVRTSVDVVSSQASRLEQQVKSFVANLRTQS

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=245, Percent_Identity=30.2040816326531, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788195, Length=240, Percent_Identity=31.6666666666667, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1789453, Length=191, Percent_Identity=34.5549738219895, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1787690, Length=239, Percent_Identity=29.7071129707113, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI2367378, Length=177, Percent_Identity=32.7683615819209, Blast_Score=82, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 48485; Mature: 48354

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQGKPGTSLAPQRSAPTTAVARFVHCIEQGLREVLMALPGWSKSAPVAESSDLALLTAI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
FDTLTTPVFVRCIKPGEEKVVYANGPFLTAMQITRREDLVGKPPTNIFAPVQPGNLTPAA
HHHHHHHHHHHEECCCCCEEEEECCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
FVKSVEAGIKRDGEWAGSAIYRRKDGSDFEVIAHVRPFTFQGKPHLLAQLQDMNSVAAVA
HHHHHHHHHCCCCCHHCCHHEECCCCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHHHH
RRREAFTKLADTLEGEVGTSMAAIANAATQLNSVVSVLARSAAAAAGQTDGLVSINDRTG
HHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
SSVVSVAEETDGLISSMTAIGDQAQRSTGIAGNAARQASDTQEIVNRLVAAAERIGDVVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
LIQSIASQTNLLALNATIEAARAGESGKGFAVVASEVKSLAQQTAKATEDIAAQINDIQA
HHHHHHCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTTQTVDAIRSISGTIEQINDISRTIADTVQVQSGAARRISENVSLASNGTRDVAHAVAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHH
VAQAAQETSGAVDQVRTSVDVVSSQASRLEQQVKSFVANLRTQS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GQGKPGTSLAPQRSAPTTAVARFVHCIEQGLREVLMALPGWSKSAPVAESSDLALLTAI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
FDTLTTPVFVRCIKPGEEKVVYANGPFLTAMQITRREDLVGKPPTNIFAPVQPGNLTPAA
HHHHHHHHHHHEECCCCCEEEEECCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
FVKSVEAGIKRDGEWAGSAIYRRKDGSDFEVIAHVRPFTFQGKPHLLAQLQDMNSVAAVA
HHHHHHHHHCCCCCHHCCHHEECCCCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHHHH
RRREAFTKLADTLEGEVGTSMAAIANAATQLNSVVSVLARSAAAAAGQTDGLVSINDRTG
HHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
SSVVSVAEETDGLISSMTAIGDQAQRSTGIAGNAARQASDTQEIVNRLVAAAERIGDVVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
LIQSIASQTNLLALNATIEAARAGESGKGFAVVASEVKSLAQQTAKATEDIAAQINDIQA
HHHHHHCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTTQTVDAIRSISGTIEQINDISRTIADTVQVQSGAARRISENVSLASNGTRDVAHAVAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHH
VAQAAQETSGAVDQVRTSVDVVSSQASRLEQQVKSFVANLRTQS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]