| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425307
Identifier: 158425307
GI number: 158425307
Start: 4230587
End: 4231108
Strand: Reverse
Name: 158425307
Synonym: AZC_3683
Alternate gene names: NA
Gene position: 4231108-4230587 (Counterclockwise)
Preceding gene: 158425309
Following gene: 158425306
Centisome position: 78.79
GC content: 66.67
Gene sequence:
>522_bases ATGACCGACGCCAACGACCCGCCCGTCGTTCCGGACGAGGAGCCCACGGTTTTCGCCGCCACACTCGCCCCGCATCGCTC GTTGTCGAAGCGGGGCTTCGTCATCGTCATGCTCATCATCGGCGGCCTCAGCTTCGGCTCGGGTGTAATGTTCCTCGCCA TGGGCGCCTGGCCTATCTTCGGCTTCTTCGGGCTCGATGTGCTCTTGGTCTATTGGGCCTTCAAGGCCAACTTCCGGGCG GCGGACGCGCGCGAATTCATCCGCATCACCCCGAGCCTCGTGGAAGTGCGCCATGTGCCCGCGCGGGGGAAAGGCTGGGA GGCGCGCATGAATCCCTTCTGGACGCGGGTGAAGCGGCAGGATGACGAGGACCACGGCACGCTCGCCCTGGCCCTCGTCT CGCAGGGACGGGAGACGCCGGTCGGCGGCTTCCTCGGTCCTATCCAGAAGGGCGCGCTGGCCGATGACCTCACCCATGCC CTGAGCGAGGTGAAGCGCGGCGTCACCCGCACCCATTTCTGA
Upstream 100 bases:
>100_bases GGCGACAGGGGCCGCCTTGCGGCCGGTGGCCTTGGCGGGCACGGGAGGCGGCGCGGAGCCAGTCGTCTTTCGCGGCATTT TTCACGTATACTGTGCAGCC
Downstream 100 bases:
>100_bases TCGGGGCGCGCGGCGGTGAAATCGGGTGGCCCGCTGGCGCGGCCGGTGCTGTGATGGCACGAAACGTCCGAAGGGGAAGA ACGCCCGTGCTCGACCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTDANDPPVVPDEEPTVFAATLAPHRSLSKRGFVIVMLIIGGLSFGSGVMFLAMGAWPIFGFFGLDVLLVYWAFKANFRA ADAREFIRITPSLVEVRHVPARGKGWEARMNPFWTRVKRQDDEDHGTLALALVSQGRETPVGGFLGPIQKGALADDLTHA LSEVKRGVTRTHF
Sequences:
>Translated_173_residues MTDANDPPVVPDEEPTVFAATLAPHRSLSKRGFVIVMLIIGGLSFGSGVMFLAMGAWPIFGFFGLDVLLVYWAFKANFRA ADAREFIRITPSLVEVRHVPARGKGWEARMNPFWTRVKRQDDEDHGTLALALVSQGRETPVGGFLGPIQKGALADDLTHA LSEVKRGVTRTHF >Mature_172_residues TDANDPPVVPDEEPTVFAATLAPHRSLSKRGFVIVMLIIGGLSFGSGVMFLAMGAWPIFGFFGLDVLLVYWAFKANFRAA DAREFIRITPSLVEVRHVPARGKGWEARMNPFWTRVKRQDDEDHGTLALALVSQGRETPVGGFLGPIQKGALADDLTHAL SEVKRGVTRTHF
Specific function: Unknown
COG id: COG5488
COG function: function code S; Integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19018; Mature: 18887
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDANDPPVVPDEEPTVFAATLAPHRSLSKRGFVIVMLIIGGLSFGSGVMFLAMGAWPIF CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHCCCCCCCCHHHHHHHHHHHH GFFGLDVLLVYWAFKANFRAADAREFIRITPSLVEVRHVPARGKGWEARMNPFWTRVKRQ HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC DDEDHGTLALALVSQGRETPVGGFLGPIQKGALADDLTHALSEVKRGVTRTHF CCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDANDPPVVPDEEPTVFAATLAPHRSLSKRGFVIVMLIIGGLSFGSGVMFLAMGAWPIF CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHCCCCCCCCHHHHHHHHHHHH GFFGLDVLLVYWAFKANFRAADAREFIRITPSLVEVRHVPARGKGWEARMNPFWTRVKRQ HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC DDEDHGTLALALVSQGRETPVGGFLGPIQKGALADDLTHALSEVKRGVTRTHF CCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA