| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425282
Identifier: 158425282
GI number: 158425282
Start: 4203594
End: 4205531
Strand: Reverse
Name: 158425282
Synonym: AZC_3658
Alternate gene names: NA
Gene position: 4205531-4203594 (Counterclockwise)
Preceding gene: 158425283
Following gene: 158425280
Centisome position: 78.32
GC content: 73.89
Gene sequence:
>1938_bases ATGCCGGTTGCCCCGCTCGTCCTGCCCCTGCGCCGGTTTCCGGCCCTGGCGTGGTGCCGGCGTGCGCTGGCGGCGCTCCA GCAGTCCGATCCCGGCCTGCTGCGCACCTTCATCGCCCTGCGGGTGTTGGCCTGCGTCATCCTCACGGGTGGTCTCCTGT TGCCCGGCCTCAAGCTCACCGGCCTGCCGCTGACCGTCGCGGCGCCCGCGTTGGTGCTGGCCATGGTGCTCCCGGTTCTG GTGCGTCAGACGGGCTGGCGGGACTATGCCCGTGCGCTGGGCCTCGTCGTGGCCTGCGCGCTCTCCACCTACCTGTGCGG CGCGCTGCTCGCCCCCTGGCCGGCGCTGGTGCAGGCGGGCTTCATCCTCGTGCTGACGCTGGCGGTCGCCGTGCATCCCC TCGGTCTCGGCCCGACCGCGGCGGGCATGGTGGCAGGCGTGCTCTATTATGTTGGGCTCTACCTCCATCCCGGACCCGCG GACCTCGGCGCTGCCCTCGCCATCGTGCCGGTGGCGCTGGCGGTGGTGGTGCTGGTCTGCCGCGTCCTCCTGCCTTCCGC GCCCGCCGCCGTGCTGCGCCGGGCGGTGCAGGCGCTTGCCTGCCGGGGCGCGGCGGTGCTGCGGCGGATGGCCGAGGGCC GCGAGCCGGACCTCGCTTTGGCCCGCCTGAACGAGGTGGCGCTGCTGGTGGAGGACCATCTGGCGCTCGCCGCCGGTCGC GTCGGTGCTGGTGCTGCTTATGCCGCAAGCATGGCCGAGGCGGTTCTGGCCTTCGAGCAGGCAGTGGGGGCGCTGCGTCT GCGCCCGCCACCCCGCGAATGCGCCCGCCTGCTGCTCGCCTGCGCCGCCCGGCTGGAAGAGGGGGCCTTCGCTCCGCCCC GCGGTGTGGACGTGCCCTGCGGCCCGACCCGCCGCACTGTGCGCGACATCGAGGTGGCCGCCGCCCGCATGTCGGAGATC GCGGGGGCAGCGGCCACGGGCTTCCGCCCCGCGCCCGGCGCCCCTGCCGCCGGCCCGGTGGGGCTCGCGTGGCGGGCGGC GGTGCGCGTGGCTCTCGCCGGCACGCTCACCCTCTGGGTGGGGCTCGCCATCTCGCCCGAGCGCTGGTTCTGGGGCGTCT TCTCCGTCTTCCTCGTGCTGCTCGGCATGCGCTCGCGCGCCGAGATGATCCACCGCAGCGCCCAGCGCATCATCGGGACG CTGGCCGGAGTCGTGGCCGGCGCGGCGGCGACCTACGCCCTCCGGGGACATCCGGCGGCCGAGGTCGCCCTGATGCTCGT CTGCGTCGCTGGCTGGGCCTTCTTCATCCTGCATGCCTATGCCAAGGCGATCTTCTTCCTCACCGTGCTGGTGGGCCTGG TCTACGGCAGTCTCGGCGCCACCATGTCCGAGCTGCTGGAGATCCGGCTGGCCGAGGTGAGCGCCGGCTGTCTCATCGCC ATGCTCTGCGCGCTTGTCATCTTCCCCGTGCCGACGCGGCCGCTGCTGGCGCGGCAGGTGCGGGCCGTCATGGCGGGGCT GGCCGAGGTGGTCCGTCTGTCGCGGCAGCGCCTCGCTGGTGATGTGTCGGCGCAGCCGGTGCGCGCCATGCGGGCGGTGG ACCGCAGCTTCCGCGAGGCGGCGGGCGCGCTGGCGAGCCTGGAGGCCGCGCGCCGTCTGGTGGTTGGAGCGGAGCCCGAT CCGCTGCCGCGGACCCTTCTGGCGTCAGTCCATTGGGCACGGCAAGTGGCCGGTCAGGCGGAGAGCGGCAGCCTCGCTCT GACGGCGGATGGGGCAGCCCGTCTTGCGCGGGCGGAAGCTTGCCTTACAGCGCCTGCGGACGGCGAAACCGCAACGGCTG ACCTCGCTGCGGCGAATGAGGCGCTGGAGGCAGCGCTCCGGGCATCCGGTCCTTACGAAAACGGCGCGCCTGGATCCGGC GCGCCGCTCTCCTCTTGA
Upstream 100 bases:
>100_bases CCGGCGGGCCTTTGGCGTTTTGCGGATCGGGCCGGACCGCTTGTGCAGCGCAGCGGGGTGCGTTAGTTTAGGTCAATAAT GCTGACCTAAAGGAGCGCCC
Downstream 100 bases:
>100_bases AACTACGCCGGTCGGTCCGTCAGGGACGCGGGCCGGCCGTCGCCGTCATCTTGAAGGCGGCGAGGGCGTCGAAGGGATCG TCCAGGCTCAGCAGGGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 645; Mature: 644
Protein sequence:
>645_residues MPVAPLVLPLRRFPALAWCRRALAALQQSDPGLLRTFIALRVLACVILTGGLLLPGLKLTGLPLTVAAPALVLAMVLPVL VRQTGWRDYARALGLVVACALSTYLCGALLAPWPALVQAGFILVLTLAVAVHPLGLGPTAAGMVAGVLYYVGLYLHPGPA DLGAALAIVPVALAVVVLVCRVLLPSAPAAVLRRAVQALACRGAAVLRRMAEGREPDLALARLNEVALLVEDHLALAAGR VGAGAAYAASMAEAVLAFEQAVGALRLRPPPRECARLLLACAARLEEGAFAPPRGVDVPCGPTRRTVRDIEVAAARMSEI AGAAATGFRPAPGAPAAGPVGLAWRAAVRVALAGTLTLWVGLAISPERWFWGVFSVFLVLLGMRSRAEMIHRSAQRIIGT LAGVVAGAAATYALRGHPAAEVALMLVCVAGWAFFILHAYAKAIFFLTVLVGLVYGSLGATMSELLEIRLAEVSAGCLIA MLCALVIFPVPTRPLLARQVRAVMAGLAEVVRLSRQRLAGDVSAQPVRAMRAVDRSFREAAGALASLEAARRLVVGAEPD PLPRTLLASVHWARQVAGQAESGSLALTADGAARLARAEACLTAPADGETATADLAAANEALEAALRASGPYENGAPGSG APLSS
Sequences:
>Translated_645_residues MPVAPLVLPLRRFPALAWCRRALAALQQSDPGLLRTFIALRVLACVILTGGLLLPGLKLTGLPLTVAAPALVLAMVLPVL VRQTGWRDYARALGLVVACALSTYLCGALLAPWPALVQAGFILVLTLAVAVHPLGLGPTAAGMVAGVLYYVGLYLHPGPA DLGAALAIVPVALAVVVLVCRVLLPSAPAAVLRRAVQALACRGAAVLRRMAEGREPDLALARLNEVALLVEDHLALAAGR VGAGAAYAASMAEAVLAFEQAVGALRLRPPPRECARLLLACAARLEEGAFAPPRGVDVPCGPTRRTVRDIEVAAARMSEI AGAAATGFRPAPGAPAAGPVGLAWRAAVRVALAGTLTLWVGLAISPERWFWGVFSVFLVLLGMRSRAEMIHRSAQRIIGT LAGVVAGAAATYALRGHPAAEVALMLVCVAGWAFFILHAYAKAIFFLTVLVGLVYGSLGATMSELLEIRLAEVSAGCLIA MLCALVIFPVPTRPLLARQVRAVMAGLAEVVRLSRQRLAGDVSAQPVRAMRAVDRSFREAAGALASLEAARRLVVGAEPD PLPRTLLASVHWARQVAGQAESGSLALTADGAARLARAEACLTAPADGETATADLAAANEALEAALRASGPYENGAPGSG APLSS >Mature_644_residues PVAPLVLPLRRFPALAWCRRALAALQQSDPGLLRTFIALRVLACVILTGGLLLPGLKLTGLPLTVAAPALVLAMVLPVLV RQTGWRDYARALGLVVACALSTYLCGALLAPWPALVQAGFILVLTLAVAVHPLGLGPTAAGMVAGVLYYVGLYLHPGPAD LGAALAIVPVALAVVVLVCRVLLPSAPAAVLRRAVQALACRGAAVLRRMAEGREPDLALARLNEVALLVEDHLALAAGRV GAGAAYAASMAEAVLAFEQAVGALRLRPPPRECARLLLACAARLEEGAFAPPRGVDVPCGPTRRTVRDIEVAAARMSEIA GAAATGFRPAPGAPAAGPVGLAWRAAVRVALAGTLTLWVGLAISPERWFWGVFSVFLVLLGMRSRAEMIHRSAQRIIGTL AGVVAGAAATYALRGHPAAEVALMLVCVAGWAFFILHAYAKAIFFLTVLVGLVYGSLGATMSELLEIRLAEVSAGCLIAM LCALVIFPVPTRPLLARQVRAVMAGLAEVVRLSRQRLAGDVSAQPVRAMRAVDRSFREAAGALASLEAARRLVVGAEPDP LPRTLLASVHWARQVAGQAESGSLALTADGAARLARAEACLTAPADGETATADLAAANEALEAALRASGPYENGAPGSGA PLSS
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66554; Mature: 66422
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVAPLVLPLRRFPALAWCRRALAALQQSDPGLLRTFIALRVLACVILTGGLLLPGLKLT CCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GLPLTVAAPALVLAMVLPVLVRQTGWRDYARALGLVVACALSTYLCGALLAPWPALVQAG CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH FILVLTLAVAVHPLGLGPTAAGMVAGVLYYVGLYLHPGPADLGAALAIVPVALAVVVLVC HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RVLLPSAPAAVLRRAVQALACRGAAVLRRMAEGREPDLALARLNEVALLVEDHLALAAGR HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC VGAGAAYAASMAEAVLAFEQAVGALRLRPPPRECARLLLACAARLEEGAFAPPRGVDVPC CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GPTRRTVRDIEVAAARMSEIAGAAATGFRPAPGAPAAGPVGLAWRAAVRVALAGTLTLWV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GLAISPERWFWGVFSVFLVLLGMRSRAEMIHRSAQRIIGTLAGVVAGAAATYALRGHPAA HCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH EVALMLVCVAGWAFFILHAYAKAIFFLTVLVGLVYGSLGATMSELLEIRLAEVSAGCLIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLCALVIFPVPTRPLLARQVRAVMAGLAEVVRLSRQRLAGDVSAQPVRAMRAVDRSFREA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AGALASLEAARRLVVGAEPDPLPRTLLASVHWARQVAGQAESGSLALTADGAARLARAEA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHH CLTAPADGETATADLAAANEALEAALRASGPYENGAPGSGAPLSS HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PVAPLVLPLRRFPALAWCRRALAALQQSDPGLLRTFIALRVLACVILTGGLLLPGLKLT CCCHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GLPLTVAAPALVLAMVLPVLVRQTGWRDYARALGLVVACALSTYLCGALLAPWPALVQAG CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH FILVLTLAVAVHPLGLGPTAAGMVAGVLYYVGLYLHPGPADLGAALAIVPVALAVVVLVC HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RVLLPSAPAAVLRRAVQALACRGAAVLRRMAEGREPDLALARLNEVALLVEDHLALAAGR HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC VGAGAAYAASMAEAVLAFEQAVGALRLRPPPRECARLLLACAARLEEGAFAPPRGVDVPC CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GPTRRTVRDIEVAAARMSEIAGAAATGFRPAPGAPAAGPVGLAWRAAVRVALAGTLTLWV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GLAISPERWFWGVFSVFLVLLGMRSRAEMIHRSAQRIIGTLAGVVAGAAATYALRGHPAA HCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH EVALMLVCVAGWAFFILHAYAKAIFFLTVLVGLVYGSLGATMSELLEIRLAEVSAGCLIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLCALVIFPVPTRPLLARQVRAVMAGLAEVVRLSRQRLAGDVSAQPVRAMRAVDRSFREA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AGALASLEAARRLVVGAEPDPLPRTLLASVHWARQVAGQAESGSLALTADGAARLARAEA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHH CLTAPADGETATADLAAANEALEAALRASGPYENGAPGSGAPLSS HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA