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The map label for this gene is sufC [C]

Identifier: 158425238

GI number: 158425238

Start: 4143117

End: 4143872

Strand: Reverse

Name: sufC [C]

Synonym: AZC_3614

Alternate gene names: 158425238

Gene position: 4143872-4143117 (Counterclockwise)

Preceding gene: 158425239

Following gene: 158425237

Centisome position: 77.17

GC content: 64.95

Gene sequence:

>756_bases
ATGGCTTTGCTCGAGATCAACAACCTGCACGCGTCCATCAATGAGAAGGAGATCCTCAAGGGTCTCGACCTCAAGGTGAA
TGCGGGCGAAGTCCACGCCATCATGGGGCCGAACGGCTCCGGCAAGTCCACCCTGTCCTATGTCCTCTCCGGCAAGCCGG
ATTATGAGGTGACGGAGGGCTCCGCCGTGCTCGACGGCGTCGATCTGCTGGAACTGGGCGCCGACGAGCGCGCCGCCGCC
GGCCTGTTCCTCGCCTTCCAGTATCCGGTGGAAGTGCCGGGCGTCGCCACCATGACCTTCCTGCGCACGGCCCTGAATGC
CCAGCGCAAGGCGCGCGGTGAGGACGAGCTGTCCACGCCGGACTTCCTGCGCATCGTGAAGGAGAAGGCCGGCTTCCTCG
GCATTTCGCAGGAGATGCTGCGTCGTGGCGTGAACGTCGGCTTCTCCGGCGGCGAGAAGAAGCGCAACGAGATCCTCCAG
ATGGCCCTTCTGGAGCCGAAGGTGGCGATCCTCGACGAGACCGATTCCGGCCTCGACATCGACGCGCTGAAGATCGTCTC
CGAAGGCGTGAACGCCCTGCGCTCGAAGGACCGCGCCATGGTGGTCATCACCCACTACCAGCGCCTGCTCGATCACATCG
TGCCGGACGTGGTGCATGTGATGCACAAGGGCCGCATCGTGCGCTCCGGCGGCAAGGAACTGGCGCTGGAGCTGGAAGCC
TCGGGCTATGCGGCCTATGGCCAGGACGCGGCGTGA

Upstream 100 bases:

>100_bases
GCCGCAGGGCGGGGACAGACATCCGGACGGGACGGCAGGTGCGCGCTGGGACACAAGGCCGCGCACCGCCCCACCGCAAC
CTAAACAATGGAACACGCCA

Downstream 100 bases:

>100_bases
GGAACACGGCCATGAACGTCGTCACCCCCTTGCGCACGGCCGCCGAGCAGGCGCTCGCCGCCGCCGTGGAGCAGCGCCTT
CAGAGCCAGCCCGTCGCGGG

Product: FeS assembly ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MALLEINNLHASINEKEILKGLDLKVNAGEVHAIMGPNGSGKSTLSYVLSGKPDYEVTEGSAVLDGVDLLELGADERAAA
GLFLAFQYPVEVPGVATMTFLRTALNAQRKARGEDELSTPDFLRIVKEKAGFLGISQEMLRRGVNVGFSGGEKKRNEILQ
MALLEPKVAILDETDSGLDIDALKIVSEGVNALRSKDRAMVVITHYQRLLDHIVPDVVHVMHKGRIVRSGGKELALELEA
SGYAAYGQDAA

Sequences:

>Translated_251_residues
MALLEINNLHASINEKEILKGLDLKVNAGEVHAIMGPNGSGKSTLSYVLSGKPDYEVTEGSAVLDGVDLLELGADERAAA
GLFLAFQYPVEVPGVATMTFLRTALNAQRKARGEDELSTPDFLRIVKEKAGFLGISQEMLRRGVNVGFSGGEKKRNEILQ
MALLEPKVAILDETDSGLDIDALKIVSEGVNALRSKDRAMVVITHYQRLLDHIVPDVVHVMHKGRIVRSGGKELALELEA
SGYAAYGQDAA
>Mature_250_residues
ALLEINNLHASINEKEILKGLDLKVNAGEVHAIMGPNGSGKSTLSYVLSGKPDYEVTEGSAVLDGVDLLELGADERAAAG
LFLAFQYPVEVPGVATMTFLRTALNAQRKARGEDELSTPDFLRIVKEKAGFLGISQEMLRRGVNVGFSGGEKKRNEILQM
ALLEPKVAILDETDSGLDIDALKIVSEGVNALRSKDRAMVVITHYQRLLDHIVPDVVHVMHKGRIVRSGGKELALELEAS
GYAAYGQDAA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI42741659, Length=239, Percent_Identity=29.2887029288703, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI148612844, Length=225, Percent_Identity=30.2222222222222, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI255708477, Length=222, Percent_Identity=30.6306306306306, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI4505771, Length=236, Percent_Identity=28.8135593220339, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI9961252, Length=236, Percent_Identity=28.8135593220339, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI9961250, Length=236, Percent_Identity=28.8135593220339, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1787972, Length=241, Percent_Identity=58.50622406639, Blast_Score=298, Evalue=3e-82,
Organism=Escherichia coli, GI1788225, Length=240, Percent_Identity=30, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787029, Length=238, Percent_Identity=25.6302521008403, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787370, Length=233, Percent_Identity=26.1802575107296, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790525, Length=222, Percent_Identity=30.6306306306306, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789864, Length=242, Percent_Identity=25.6198347107438, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI87081791, Length=246, Percent_Identity=26.8292682926829, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787758, Length=241, Percent_Identity=26.1410788381743, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71992290, Length=254, Percent_Identity=29.1338582677165, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193209708, Length=232, Percent_Identity=31.4655172413793, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71996809, Length=219, Percent_Identity=28.310502283105, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=226, Percent_Identity=28.3185840707965, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25146777, Length=213, Percent_Identity=29.5774647887324, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI115533592, Length=228, Percent_Identity=29.3859649122807, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=217, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=233, Percent_Identity=27.8969957081545, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=219, Percent_Identity=27.8538812785388, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=219, Percent_Identity=27.8538812785388, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=223, Percent_Identity=28.2511210762332, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71992285, Length=224, Percent_Identity=30.3571428571429, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=241, Percent_Identity=25.7261410788382, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6319856, Length=242, Percent_Identity=28.099173553719, Blast_Score=62, Evalue=1e-10,
Organism=Drosophila melanogaster, GI281363262, Length=219, Percent_Identity=31.5068493150685, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24653245, Length=219, Percent_Identity=31.5068493150685, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI85724864, Length=238, Percent_Identity=28.1512605042017, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580555, Length=238, Percent_Identity=28.1512605042017, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI85816269, Length=238, Percent_Identity=28.1512605042017, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580553, Length=238, Percent_Identity=28.1512605042017, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27063; Mature: 26932

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLEINNLHASINEKEILKGLDLKVNAGEVHAIMGPNGSGKSTLSYVLSGKPDYEVTEG
CEEEEECCCCCCCCHHHHHCCCCEEEECCCEEEEECCCCCCCHHHHHEECCCCCCEECCC
SAVLDGVDLLELGADERAAAGLFLAFQYPVEVPGVATMTFLRTALNAQRKARGEDELSTP
CCHHCCHHHHHCCCCCHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH
DFLRIVKEKAGFLGISQEMLRRGVNVGFSGGEKKRNEILQMALLEPKVAILDETDSGLDI
HHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCH
DALKIVSEGVNALRSKDRAMVVITHYQRLLDHIVPDVVHVMHKGRIVRSGGKELALELEA
HHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEEC
SGYAAYGQDAA
CCCCCCCCCCC
>Mature Secondary Structure 
ALLEINNLHASINEKEILKGLDLKVNAGEVHAIMGPNGSGKSTLSYVLSGKPDYEVTEG
EEEEECCCCCCCCHHHHHCCCCEEEECCCEEEEECCCCCCCHHHHHEECCCCCCEECCC
SAVLDGVDLLELGADERAAAGLFLAFQYPVEVPGVATMTFLRTALNAQRKARGEDELSTP
CCHHCCHHHHHCCCCCHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH
DFLRIVKEKAGFLGISQEMLRRGVNVGFSGGEKKRNEILQMALLEPKVAILDETDSGLDI
HHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCH
DALKIVSEGVNALRSKDRAMVVITHYQRLLDHIVPDVVHVMHKGRIVRSGGKELALELEA
HHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEEC
SGYAAYGQDAA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]