| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is xlnD [H]
Identifier: 158425167
GI number: 158425167
Start: 4069000
End: 4070160
Strand: Reverse
Name: xlnD [H]
Synonym: AZC_3543
Alternate gene names: 158425167
Gene position: 4070160-4069000 (Counterclockwise)
Preceding gene: 158425168
Following gene: 158425159
Centisome position: 75.8
GC content: 73.04
Gene sequence:
>1161_bases TTGGGCCAGACCTCGCCCGCCAGTGCGCTCATCGTCGGTGCCGGCATCGGCGGTCTGGCGTGCGGCATCGCCCTGCGCCG GGCGGGCCTCGCCGTGCGCATGGTGGAGCAGGCGGACGAGCTTGCCGAAGTGGGCGCCGGCCTTCAGCTGACGCCCAACG CCACCCGTCACCTGCGCGATTTCGGCGTGCTCGATGCGCTGGAGACGGTCGCCGTGAAGCCGCGCGCCCTTGAGGTGCGG GACGGCCAGACCTTCGGCCTGCTGGCCCGCTGCGACTATGCGCCTGCCGTCGCGAAATACGGTGCGCCCTTCCTCGTGCT GCACCGGGCCGACTTGCAGAAGGCCCTGGCCGACGGCGCGAAGGCTGCGGGGTGCGACATCCTGCTTGGGGCCCGGCTGC AAAGCCTCGACACCCATGGCGACAATCTGCGCGCTGTGGCGGAGCAGGAGGCCGGCCTCATCGCCGAGACCGCCGACATC GTGATCGGCGCCGATGGCGTGCGCTCGCTGGTGCGCGAGCATCTGCAGGTGGGCGTGCGCCCGTCCTTTGCCCGGCGTGT GGCCTATCGCGCCACCATTCCCGTGCGGGCCGACACGCCGCCGGATGTGCGCCTGTTCCTGGGCCCCGACGCCCACCTCG TGACCTATCCCATCCGCGCCGGCGCGGCGGTGAATGTGGTCGCCATCGTGCGACAGGACCGGCCGGTCAACCGCTGGAGC GAGCCGGGCGACGCCAGCACCGTGCATGAGGCCTTCTCGCAATGGGCGCCCGAAGTGCGCTCGCTGCTGCTCGATGCCTC CTCTTTCCTGTGCTGGGGCCTCTATGACGTGGACCCGCTGCCGCGCTGGGGCGCCGGGCGCACGACGCTGCTGGGCGATG CCGCCCACGCCATGCTGCCCTTCCTCGCGCAGGGCGCCGCGCAGGCCATCGAGGACGCCGCGACGCTCGGGTCCGTTCTG GGGGCTGGCGGCCCGCTGGAGCCCGCGCTGCGCCGCTACGAGGCGCTGCGTCAGGCGCGCGCCGCCCGCGTTCAGCGCGG GGCCCGCCGCAATGCGGTGATCTATCACCTGAAGGGCCCGGCCCGGTTCGCCCGCGATCTGGCGCTGCGCGCCACCGGCG GCAGCCTCCTGTCGCGCTACGATTGGCTCTACGGGGGCTGA
Upstream 100 bases:
>100_bases GCTCCTACTGCTCCACCCTCTATCGCTACAATCCGGCCCTGAAGGCCGGCACGGCGAAGCCTGAAGGCTGCGTCTGGGCA GACAAGCCGGCGGCCTGACA
Downstream 100 bases:
>100_bases TCGCTCAGCCCCACGCGGCCAGCAGCGCCCGGCCTGCCTCCCGCTCAAAGAGCGAGATCGACCCAGACCGCTGAATGGTC GGATGCGGCATCCGCAGGCC
Product: salicylate hydroxylase
Products: NA
Alternate protein names: Constitutive 3-hydroxybenzoate 6-hydroxylase [H]
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MGQTSPASALIVGAGIGGLACGIALRRAGLAVRMVEQADELAEVGAGLQLTPNATRHLRDFGVLDALETVAVKPRALEVR DGQTFGLLARCDYAPAVAKYGAPFLVLHRADLQKALADGAKAAGCDILLGARLQSLDTHGDNLRAVAEQEAGLIAETADI VIGADGVRSLVREHLQVGVRPSFARRVAYRATIPVRADTPPDVRLFLGPDAHLVTYPIRAGAAVNVVAIVRQDRPVNRWS EPGDASTVHEAFSQWAPEVRSLLLDASSFLCWGLYDVDPLPRWGAGRTTLLGDAAHAMLPFLAQGAAQAIEDAATLGSVL GAGGPLEPALRRYEALRQARAARVQRGARRNAVIYHLKGPARFARDLALRATGGSLLSRYDWLYGG
Sequences:
>Translated_386_residues MGQTSPASALIVGAGIGGLACGIALRRAGLAVRMVEQADELAEVGAGLQLTPNATRHLRDFGVLDALETVAVKPRALEVR DGQTFGLLARCDYAPAVAKYGAPFLVLHRADLQKALADGAKAAGCDILLGARLQSLDTHGDNLRAVAEQEAGLIAETADI VIGADGVRSLVREHLQVGVRPSFARRVAYRATIPVRADTPPDVRLFLGPDAHLVTYPIRAGAAVNVVAIVRQDRPVNRWS EPGDASTVHEAFSQWAPEVRSLLLDASSFLCWGLYDVDPLPRWGAGRTTLLGDAAHAMLPFLAQGAAQAIEDAATLGSVL GAGGPLEPALRRYEALRQARAARVQRGARRNAVIYHLKGPARFARDLALRATGGSLLSRYDWLYGG >Mature_385_residues GQTSPASALIVGAGIGGLACGIALRRAGLAVRMVEQADELAEVGAGLQLTPNATRHLRDFGVLDALETVAVKPRALEVRD GQTFGLLARCDYAPAVAKYGAPFLVLHRADLQKALADGAKAAGCDILLGARLQSLDTHGDNLRAVAEQEAGLIAETADIV IGADGVRSLVREHLQVGVRPSFARRVAYRATIPVRADTPPDVRLFLGPDAHLVTYPIRAGAAVNVVAIVRQDRPVNRWSE PGDASTVHEAFSQWAPEVRSLLLDASSFLCWGLYDVDPLPRWGAGRTTLLGDAAHAMLPFLAQGAAQAIEDAATLGSVLG AGGPLEPALRRYEALRQARAARVQRGARRNAVIYHLKGPARFARDLALRATGGSLLSRYDWLYGG
Specific function: Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP. The enzyme shows higher specific activities against the intermediates in the degradation of 2,5- xyleno
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-hydroxybenzoate 6-hydroxylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.24 [H]
Molecular weight: Translated: 40926; Mature: 40795
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQTSPASALIVGAGIGGLACGIALRRAGLAVRMVEQADELAEVGAGLQLTPNATRHLRD CCCCCCCCEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEECCCHHHHHHH FGVLDALETVAVKPRALEVRDGQTFGLLARCDYAPAVAKYGAPFLVLHRADLQKALADGA HHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCHHHHHCCCCEEEEEHHHHHHHHHCCC KAAGCDILLGARLQSLDTHGDNLRAVAEQEAGLIAETADIVIGADGVRSLVREHLQVGVR CCCCCCEEECCHHHHHCCCCCCHHHHHHHHCCCEEECCCEEEECHHHHHHHHHHHHCCCC PSFARRVAYRATIPVRADTPPDVRLFLGPDAHLVTYPIRAGAAVNVVAIVRQDRPVNRWS HHHHHHHHHEEEEEEECCCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCC EPGDASTVHEAFSQWAPEVRSLLLDASSFLCWGLYDVDPLPRWGAGRTTLLGDAAHAMLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEECHHHHHHHH FLAQGAAQAIEDAATLGSVLGAGGPLEPALRRYEALRQARAARVQRGARRNAVIYHLKGP HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCH ARFARDLALRATGGSLLSRYDWLYGG HHHHHHHHEECCCHHHHHHHHHHCCC >Mature Secondary Structure GQTSPASALIVGAGIGGLACGIALRRAGLAVRMVEQADELAEVGAGLQLTPNATRHLRD CCCCCCCEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEECCCHHHHHHH FGVLDALETVAVKPRALEVRDGQTFGLLARCDYAPAVAKYGAPFLVLHRADLQKALADGA HHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCHHHHHCCCCEEEEEHHHHHHHHHCCC KAAGCDILLGARLQSLDTHGDNLRAVAEQEAGLIAETADIVIGADGVRSLVREHLQVGVR CCCCCCEEECCHHHHHCCCCCCHHHHHHHHCCCEEECCCEEEECHHHHHHHHHHHHCCCC PSFARRVAYRATIPVRADTPPDVRLFLGPDAHLVTYPIRAGAAVNVVAIVRQDRPVNRWS HHHHHHHHHEEEEEEECCCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCC EPGDASTVHEAFSQWAPEVRSLLLDASSFLCWGLYDVDPLPRWGAGRTTLLGDAAHAMLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEECHHHHHHHH FLAQGAAQAIEDAATLGSVLGAGGPLEPALRRYEALRQARAARVQRGARRNAVIYHLKGP HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCH ARFARDLALRATGGSLLSRYDWLYGG HHHHHHHHEECCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12909360 [H]