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The map label for this gene is petA [H]

Identifier: 158425125

GI number: 158425125

Start: 4018189

End: 4018728

Strand: Reverse

Name: petA [H]

Synonym: AZC_3501

Alternate gene names: 158425125

Gene position: 4018728-4018189 (Counterclockwise)

Preceding gene: 158425129

Following gene: 158425124

Centisome position: 74.84

GC content: 66.3

Gene sequence:

>540_bases
TTGAGGGAAAGCGCCGTGGCACATACGGAGACGACCCAGACGACCCGCCGGGATTTCCTTTACATTGCAACGGGCGCGGT
CGGCGCGGTCGGCGTGGCCGGGATGGTCTGGCCCTTCGTGTCGCAGCTTCAGCCGGACGCTTCGGTGCTGGCGCTGTCCA
CCACGGAAGTGGACCTGACCCCCATCGCCGAAGGCCAGATCGTCACCACCCAGTGGCGCGGCAAGCCCATCTTCATCTTC
AACCGCGCCCCGAAGGACGTGGAAGCCGCGCGCGCCGTGCCGCTGACGCAGCTTCTCGACCCGCAGCGCGACCAGGACCG
AGTGAAGACCGGGCATGACAACTGGCTCGTGGTGATCGGCATCTGCACGCATCTGGGCTGCGTGCCGCTCGGCCACCAGG
GCAATTATGACGGCTGGTTCTGCCCCTGCCATGGCTCGCAATACGATTCGTCCGGCCGCGTGCGCGTCGGACCGGCCCCG
CTGAACCTCGCGGTGCCGCCTTACAACTTCGTTTCCGACAGCAAGATCGTGATCGGCTGA

Upstream 100 bases:

>100_bases
GGAGGGGTGTGCCTTAATCTCGCGGCGTTCGCACATGCGGAAAACAGCATTGTTCTCCGCAATATATTTGTTGCAGCCGC
GAAGATGACGCGAACGAATA

Downstream 100 bases:

>100_bases
CGTGCGCGTCGCCCGTCCATAACAAGGGTTGGCCCCATGGAAGGACATTCCACCTACCAGCCGAAGAGCAGGGTTGCGCG
CTGGTTCGAGAGCCGGCTGC

Product: ubiquinol-cytochrome c reductase

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MRESAVAHTETTQTTRRDFLYIATGAVGAVGVAGMVWPFVSQLQPDASVLALSTTEVDLTPIAEGQIVTTQWRGKPIFIF
NRAPKDVEAARAVPLTQLLDPQRDQDRVKTGHDNWLVVIGICTHLGCVPLGHQGNYDGWFCPCHGSQYDSSGRVRVGPAP
LNLAVPPYNFVSDSKIVIG

Sequences:

>Translated_179_residues
MRESAVAHTETTQTTRRDFLYIATGAVGAVGVAGMVWPFVSQLQPDASVLALSTTEVDLTPIAEGQIVTTQWRGKPIFIF
NRAPKDVEAARAVPLTQLLDPQRDQDRVKTGHDNWLVVIGICTHLGCVPLGHQGNYDGWFCPCHGSQYDSSGRVRVGPAP
LNLAVPPYNFVSDSKIVIG
>Mature_179_residues
MRESAVAHTETTQTTRRDFLYIATGAVGAVGVAGMVWPFVSQLQPDASVLALSTTEVDLTPIAEGQIVTTQWRGKPIFIF
NRAPKDVEAARAVPLTQLLDPQRDQDRVKTGHDNWLVVIGICTHLGCVPLGHQGNYDGWFCPCHGSQYDSSGRVRVGPAP
LNLAVPPYNFVSDSKIVIG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=175, Percent_Identity=48.5714285714286, Blast_Score=182, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17540418, Length=172, Percent_Identity=45.9302325581395, Blast_Score=157, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6320811, Length=166, Percent_Identity=48.7951807228916, Blast_Score=175, Evalue=3e-45,
Organism=Drosophila melanogaster, GI24580896, Length=145, Percent_Identity=48.9655172413793, Blast_Score=160, Evalue=3e-40,
Organism=Drosophila melanogaster, GI17864350, Length=114, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 19410; Mature: 19410

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRESAVAHTETTQTTRRDFLYIATGAVGAVGVAGMVWPFVSQLQPDASVLALSTTEVDLT
CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECEEEEE
PIAEGQIVTTQWRGKPIFIFNRAPKDVEAARAVPLTQLLDPQRDQDRVKTGHDNWLVVIG
ECCCCCEEEEEECCCEEEEECCCCCCCHHHHCCCHHHHCCCCCCCHHHHCCCCCEEEEEE
ICTHLGCVPLGHQGNYDGWFCPCHGSQYDSSGRVRVGPAPLNLAVPPYNFVSDSKIVIG
EHHHCCCEECCCCCCCCCEEEECCCCCCCCCCCEEECCCCCEEECCCCCCCCCCEEEEC
>Mature Secondary Structure
MRESAVAHTETTQTTRRDFLYIATGAVGAVGVAGMVWPFVSQLQPDASVLALSTTEVDLT
CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECEEEEE
PIAEGQIVTTQWRGKPIFIFNRAPKDVEAARAVPLTQLLDPQRDQDRVKTGHDNWLVVIG
ECCCCCEEEEEECCCEEEEECCCCCCCHHHHCCCHHHHCCCCCCCHHHHCCCCCEEEEEE
ICTHLGCVPLGHQGNYDGWFCPCHGSQYDSSGRVRVGPAPLNLAVPPYNFVSDSKIVIG
EHHHCCCEECCCCCCCCCEEEECCCCCCCCCCCEEECCCCCEEECCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA