| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425100
Identifier: 158425100
GI number: 158425100
Start: 3993138
End: 3994448
Strand: Reverse
Name: 158425100
Synonym: AZC_3476
Alternate gene names: NA
Gene position: 3994448-3993138 (Counterclockwise)
Preceding gene: 158425101
Following gene: 158425092
Centisome position: 74.39
GC content: 64.99
Gene sequence:
>1311_bases ATGAACGCTCCCATTGATCCTGCGGCGCTGGATGCCAGCGCGCCGGCCGCTCTCGCGGAAGTGCCGGCAGAGGTCACGCT CAGCATCTGCGTGCCCACCTACAACCGCGCCCACTTCCTCGAATATCTCTTCCCGCATCTGCGCGAGGCGTGCGCCACCT TCGATTTCACCTATGAGATCGTGGTGTCGGACAACTGCTCCCCGGACAACACGCCCGAGGTTGTCGAGCGCTTCCGGGCC GAGGGCATGCCGATCCGCTATTTCCGGCAGGACGAGAACAAGCCGTCCGCCAACATCCTCAGCGTCTATCACCGGGCCCG CGGCAAGTATCTCGTCTATGTGGCGGACGACGACCTCATCATTCCCGAGGCGCTCGCGGACAATGTGCGCTTCATGATGG CCAATCCGGAGCTGCGTGCCTGCTACACGCCTTGGGAGGTCTATGACGACCTGCACAAGGTTTCGGGTGGCTATTTCTAC GACCAGGCCGAGGATCTGATGATCTTCTCCCCCGGCCAGGAACTGGAGCTGTTCGGCGCGCTGGTGCGGGATCACATTTT CCCCGAGACGGTGATCTACCGGGCCGATGCGGCCCGCAGCATCGTCTCCGCGCCGCGCTTCTGCTACTGGGCCTTCTCCT ATCTGGCCGGCGTCGTGGCCGAGGGGCCTGTGGCGTTCCGCAACGTGCCCTTCTATCGCTCCGTGACGCTGACGCCCGTG GTGACCAACCGCGGACAGGCGGGCATCGACGGCGCCATGACCGACTGGGACAGCTATCGCGGCGGTCTCGAATATCTCAT CTTCAGCTTCCTGCGTCGCAGCAACCTTGTGGCCGGCGCCGACTTCAAGTCGACGGTGCGTGACCTCGCCGACCATTTCG TCTCGATCCGCCTCAAGGTGGCGCTGCGTCTGTGGCTCGCCCGGCAGGATTACTGCCGCGCCTATGAGATCGTGGTGCGC CTGCAGTATCTCGATCCGGCGGGCATGGAGCATCTGGAGATCCCGGAAAACCTGGCGCTGCTCGCCAATGCGCAGACGCT CGCGCGCCTCGCCAACGGCATTGCCGAGATCGACCGTGTGGTGGTCGCGGGTGTCGAGGACGGTCAGGCGCTTGGCGCGC TGTTCCGCGATGCCGGTCTCGAGCGGCGCATCTTCGTCGTGCCACCGCCGGAGAAGCCCACCGAGAGGCACCTGCGCAAC TCGCTGGTCTTCCTCGCGGACGACAGCCTGCGCCAGACCTTCCTCGATCAGGGCTATTCGCCCGGTCTCATCGTCACCGA GCGCGAGGTGCGGGGCAGCGTGCTGCTCTGA
Upstream 100 bases:
>100_bases CCCGCACCTATCGCTGGAATGATCCGGCCTTTGGCGTGGACTGGCCTTTTGAGCCCAGTGTCATTTCGGCACGCGATGCC GATGCAGAGGACTACACGCC
Downstream 100 bases:
>100_bases GCCGTGTGGGGCCCGGTCCTCCGGGCCCGCGTGCCGGCCGCTGAAATGGCTGCGGCCAACGTCCAAACAAAAGGGGCCGG CGCCATCAGCGCCGGCCCCT
Product: glycosyltransferase
Products: NA
Alternate protein names: O Antigen Biosynthesis Protein; Glycosyl Transferase Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MNAPIDPAALDASAPAALAEVPAEVTLSICVPTYNRAHFLEYLFPHLREACATFDFTYEIVVSDNCSPDNTPEVVERFRA EGMPIRYFRQDENKPSANILSVYHRARGKYLVYVADDDLIIPEALADNVRFMMANPELRACYTPWEVYDDLHKVSGGYFY DQAEDLMIFSPGQELELFGALVRDHIFPETVIYRADAARSIVSAPRFCYWAFSYLAGVVAEGPVAFRNVPFYRSVTLTPV VTNRGQAGIDGAMTDWDSYRGGLEYLIFSFLRRSNLVAGADFKSTVRDLADHFVSIRLKVALRLWLARQDYCRAYEIVVR LQYLDPAGMEHLEIPENLALLANAQTLARLANGIAEIDRVVVAGVEDGQALGALFRDAGLERRIFVVPPPEKPTERHLRN SLVFLADDSLRQTFLDQGYSPGLIVTEREVRGSVLL
Sequences:
>Translated_436_residues MNAPIDPAALDASAPAALAEVPAEVTLSICVPTYNRAHFLEYLFPHLREACATFDFTYEIVVSDNCSPDNTPEVVERFRA EGMPIRYFRQDENKPSANILSVYHRARGKYLVYVADDDLIIPEALADNVRFMMANPELRACYTPWEVYDDLHKVSGGYFY DQAEDLMIFSPGQELELFGALVRDHIFPETVIYRADAARSIVSAPRFCYWAFSYLAGVVAEGPVAFRNVPFYRSVTLTPV VTNRGQAGIDGAMTDWDSYRGGLEYLIFSFLRRSNLVAGADFKSTVRDLADHFVSIRLKVALRLWLARQDYCRAYEIVVR LQYLDPAGMEHLEIPENLALLANAQTLARLANGIAEIDRVVVAGVEDGQALGALFRDAGLERRIFVVPPPEKPTERHLRN SLVFLADDSLRQTFLDQGYSPGLIVTEREVRGSVLL >Mature_436_residues MNAPIDPAALDASAPAALAEVPAEVTLSICVPTYNRAHFLEYLFPHLREACATFDFTYEIVVSDNCSPDNTPEVVERFRA EGMPIRYFRQDENKPSANILSVYHRARGKYLVYVADDDLIIPEALADNVRFMMANPELRACYTPWEVYDDLHKVSGGYFY DQAEDLMIFSPGQELELFGALVRDHIFPETVIYRADAARSIVSAPRFCYWAFSYLAGVVAEGPVAFRNVPFYRSVTLTPV VTNRGQAGIDGAMTDWDSYRGGLEYLIFSFLRRSNLVAGADFKSTVRDLADHFVSIRLKVALRLWLARQDYCRAYEIVVR LQYLDPAGMEHLEIPENLALLANAQTLARLANGIAEIDRVVVAGVEDGQALGALFRDAGLERRIFVVPPPEKPTERHLRN SLVFLADDSLRQTFLDQGYSPGLIVTEREVRGSVLL
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48963; Mature: 48963
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPIDPAALDASAPAALAEVPAEVTLSICVPTYNRAHFLEYLFPHLREACATFDFTYEI CCCCCCCHHCCCCCCHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEE VVSDNCSPDNTPEVVERFRAEGMPIRYFRQDENKPSANILSVYHRARGKYLVYVADDDLI EEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCEE IPEALADNVRFMMANPELRACYTPWEVYDDLHKVSGGYFYDQAEDLMIFSPGQELELFGA CHHHHHCCCEEEEECCCCEEEECCHHHHHHHHHHCCCEEECCCCCEEEECCCCHHHHHHH LVRDHIFPETVIYRADAARSIVSAPRFCYWAFSYLAGVVAEGPVAFRNVPFYRSVTLTPV HHHHHCCCHHEEEECHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEE VTNRGQAGIDGAMTDWDSYRGGLEYLIFSFLRRSNLVAGADFKSTVRDLADHFVSIRLKV EECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHH ALRLWLARQDYCRAYEIVVRLQYLDPAGMEHLEIPENLALLANAQTLARLANGIAEIDRV HHHHHHHHHHHHHHEEHHEEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHE VVAGVEDGQALGALFRDAGLERRIFVVPPPEKPTERHLRNSLVFLADDSLRQTFLDQGYS EEECCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCEEEEECCHHHHHHHHCCCC PGLIVTEREVRGSVLL CCEEEEEHHCCCCCCC >Mature Secondary Structure MNAPIDPAALDASAPAALAEVPAEVTLSICVPTYNRAHFLEYLFPHLREACATFDFTYEI CCCCCCCHHCCCCCCHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEE VVSDNCSPDNTPEVVERFRAEGMPIRYFRQDENKPSANILSVYHRARGKYLVYVADDDLI EEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCEE IPEALADNVRFMMANPELRACYTPWEVYDDLHKVSGGYFYDQAEDLMIFSPGQELELFGA CHHHHHCCCEEEEECCCCEEEECCHHHHHHHHHHCCCEEECCCCCEEEECCCCHHHHHHH LVRDHIFPETVIYRADAARSIVSAPRFCYWAFSYLAGVVAEGPVAFRNVPFYRSVTLTPV HHHHHCCCHHEEEECHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEE VTNRGQAGIDGAMTDWDSYRGGLEYLIFSFLRRSNLVAGADFKSTVRDLADHFVSIRLKV EECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHH ALRLWLARQDYCRAYEIVVRLQYLDPAGMEHLEIPENLALLANAQTLARLANGIAEIDRV HHHHHHHHHHHHHHEEHHEEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHE VVAGVEDGQALGALFRDAGLERRIFVVPPPEKPTERHLRNSLVFLADDSLRQTFLDQGYS EEECCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCEEEEECCHHHHHHHHCCCC PGLIVTEREVRGSVLL CCEEEEEHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA