| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425075
Identifier: 158425075
GI number: 158425075
Start: 3966317
End: 3966526
Strand: Direct
Name: 158425075
Synonym: AZC_3451
Alternate gene names: NA
Gene position: 3966317-3966526 (Clockwise)
Preceding gene: 158425074
Following gene: 158425076
Centisome position: 73.86
GC content: 59.05
Gene sequence:
>210_bases ATGTCCGACATCGAGACCCTCAAGGCCGAGATCAAGAAGCTCTCTGCCAAGTCGGTGAATGCCAAGATGAACCTGCACGA CCTCTCCGAGGACCTGCCCACCAATTGGCAGAGCATCCTCGAGGTGGCGCAGGAGACCTACAACACCTTCAAGACGCTGG AAGACGCCCGCAAGAAGCTCAAGGAACTGGAAGCCGGTGCCGCGGCCTGA
Upstream 100 bases:
>100_bases TCGCCGAGCCCTCGGGCGACATAGAATGGACCTATCCGCGCGGCGGCTTCGGCGTGCTGTTCAAGTTCGGCTGACCGGCC GCATCATAAGGAGACGCCAC
Downstream 100 bases:
>100_bases TGCCGGCACGCCGGGCCGGCCCTGCCTGCCCTGACAAGTGGCGCGACAAGCTGCGCCCCCTCCCATGCCCAGGGACGGAA AAGCGACCGGCGGTCCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MSDIETLKAEIKKLSAKSVNAKMNLHDLSEDLPTNWQSILEVAQETYNTFKTLEDARKKLKELEAGAAA
Sequences:
>Translated_69_residues MSDIETLKAEIKKLSAKSVNAKMNLHDLSEDLPTNWQSILEVAQETYNTFKTLEDARKKLKELEAGAAA >Mature_68_residues SDIETLKAEIKKLSAKSVNAKMNLHDLSEDLPTNWQSILEVAQETYNTFKTLEDARKKLKELEAGAAA
Specific function: Unknown
COG id: COG5420
COG function: function code S; Uncharacterized conserved small protein containing a coiled-coil domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0437 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3451_AZOC5 (P26486)
Other databases:
- EMBL: X55450 - EMBL: AP009384 - PIR: S14074 - RefSeq: YP_001526367.1 - ProteinModelPortal: P26486 - SMR: P26486 - GeneID: 5689129 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_3451 - HOGENOM: HBG531119 - OMA: ARAMDAK - ProtClustDB: CLSK924332 - BioCyc: ACAU438753:AZC_3451-MONOMER - InterPro: IPR007774 - PIRSF: PIRSF037676
Pfam domain/function: PF05082 DUF683
EC number: NA
Molecular weight: Translated: 7721; Mature: 7590
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIETLKAEIKKLSAKSVNAKMNLHDLSEDLPTNWQSILEVAQETYNTFKTLEDARKKL CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KELEAGAAA HHHHCCCCC >Mature Secondary Structure SDIETLKAEIKKLSAKSVNAKMNLHDLSEDLPTNWQSILEVAQETYNTFKTLEDARKKL CHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KELEAGAAA HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1850088