| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yitW [H]
Identifier: 158425059
GI number: 158425059
Start: 3953835
End: 3954239
Strand: Reverse
Name: yitW [H]
Synonym: AZC_3435
Alternate gene names: 158425059
Gene position: 3954239-3953835 (Counterclockwise)
Preceding gene: 158425060
Following gene: 158425058
Centisome position: 73.64
GC content: 63.7
Gene sequence:
>405_bases ATGACCATGAGCGACGATTTCATGACCGACGAGCCTATGATGCCGGGCACCGAGACCGAGGACCTCTCTTCCGAGACGGC AACCGCCGTGGACTGGGACGAGGAGGCCATCACCGCCGAGATCATCGAGGCCCTGCGCACGGTGCATGATCCGGAAATCC CGGTGAACATCTATGATCTCGGCCTCGTCTACCGCATCCAGCTGCTGCCCACGGTGGGCGCCGAGATCGACATGACGCTG ACCGCGCCGGGCTGTCCCGTGGCCGGGGAACTGGTCTCCATGGTGCAGCGCGCGGTGCTGACGGTGCGCCAGATCGATGT CGCCAAGGTCAATCTGGTGTTCGATCCGCCGTGGGACACCAACCGCATGACCGACGACGTGAAGCTGGAGCTGGGTCTTC TCTGA
Upstream 100 bases:
>100_bases GGCGCCGGGCTTGCATAACGTGTCTTCAGATACGCGCACGCTCATCACCGCCGCGTGATGGGCCGGTGGGCGCGGAGCAG CCGAGAGGAGGCGGGCGCCG
Downstream 100 bases:
>100_bases TCCGGAGGCCATCTGGCACCCTCGATGCATCGGGGAGGGCAGGGACCGCGACAACCCCGGATCGCCCTGCCGCCCGCAGG GCCGCGTGTCCCGCGCGAGG
Product: metal-sulfur cluster biosynthetic enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MTMSDDFMTDEPMMPGTETEDLSSETATAVDWDEEAITAEIIEALRTVHDPEIPVNIYDLGLVYRIQLLPTVGAEIDMTL TAPGCPVAGELVSMVQRAVLTVRQIDVAKVNLVFDPPWDTNRMTDDVKLELGLL
Sequences:
>Translated_134_residues MTMSDDFMTDEPMMPGTETEDLSSETATAVDWDEEAITAEIIEALRTVHDPEIPVNIYDLGLVYRIQLLPTVGAEIDMTL TAPGCPVAGELVSMVQRAVLTVRQIDVAKVNLVFDPPWDTNRMTDDVKLELGLL >Mature_133_residues TMSDDFMTDEPMMPGTETEDLSSETATAVDWDEEAITAEIIEALRTVHDPEIPVNIYDLGLVYRIQLLPTVGAEIDMTLT APGCPVAGELVSMVQRAVLTVRQIDVAKVNLVFDPPWDTNRMTDDVKLELGLL
Specific function: May Be Part Of A Multicomponent Oxygenase Involved In Phenylacetyl-CoA Hydroxylation. [C]
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 14794; Mature: 14663
Theoretical pI: Translated: 3.67; Mature: 3.67
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSDDFMTDEPMMPGTETEDLSSETATAVDWDEEAITAEIIEALRTVHDPEIPVNIYDL CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEC GLVYRIQLLPTVGAEIDMTLTAPGCPVAGELVSMVQRAVLTVRQIDVAKVNLVFDPPWDT CEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC NRMTDDVKLELGLL CCCCCCEEEEEECC >Mature Secondary Structure TMSDDFMTDEPMMPGTETEDLSSETATAVDWDEEAITAEIIEALRTVHDPEIPVNIYDL CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEC GLVYRIQLLPTVGAEIDMTLTAPGCPVAGELVSMVQRAVLTVRQIDVAKVNLVFDPPWDT CEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC NRMTDDVKLELGLL CCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]