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The map label for this gene is yfhF [C]

Identifier: 158425033

GI number: 158425033

Start: 3937906

End: 3938226

Strand: Direct

Name: yfhF [C]

Synonym: AZC_3409

Alternate gene names: 158425033

Gene position: 3937906-3938226 (Clockwise)

Preceding gene: 158425032

Following gene: 158425034

Centisome position: 73.33

GC content: 62.93

Gene sequence:

>321_bases
ATGATCAATCTCACCGACAGCGCGTTGAATGCGGTCCGCACGGCCATTGGCTCCGCGGGCGGGCCCGTGGGCGGCCTGCG
CATCCAGGTCGAGGCGGGCGGCTGCGCCGGCTACAAGTACCAGATGGGCCTCGTCGTCGATGCAGAGCCCGATGACACGG
TGATCGAACGCGAGGGTGTGAAGGTCTTCGTGGACAACAAGAGCCACGAATATCTCGCCGGCACCACCATCGATTTCGTG
GTGGCGCTCGAAGGCTCGGGTTTCACCTTCGACAATCCGAATGCCAACAACAGCTGCTCCTGCGGCAAGTCCTTCGGCTG
A

Upstream 100 bases:

>100_bases
GCAGCAGCGACACTTCTGCAATGATTCCAAAGGACTGATCGCTGGCACGCCTCTTGCTGATCATACGTCAGAACGGCTCT
GACGCATCAGGGAGACGGCC

Downstream 100 bases:

>100_bases
ACCGTCGCTCCCACGGAGACATTCCCATCATGCTGATCGAGACCCAGATCCCCGAAGCGGCACCGGTCGTCGAAACCGAG
CGCGAACGGATCATCAAGGC

Product: iron-sulfur cluster assembly accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MINLTDSALNAVRTAIGSAGGPVGGLRIQVEAGGCAGYKYQMGLVVDAEPDDTVIEREGVKVFVDNKSHEYLAGTTIDFV
VALEGSGFTFDNPNANNSCSCGKSFG

Sequences:

>Translated_106_residues
MINLTDSALNAVRTAIGSAGGPVGGLRIQVEAGGCAGYKYQMGLVVDAEPDDTVIEREGVKVFVDNKSHEYLAGTTIDFV
VALEGSGFTFDNPNANNSCSCGKSFG
>Mature_106_residues
MINLTDSALNAVRTAIGSAGGPVGGLRIQVEAGGCAGYKYQMGLVVDAEPDDTVIEREGVKVFVDNKSHEYLAGTTIDFV
VALEGSGFTFDNPNANNSCSCGKSFG

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI160420328, Length=81, Percent_Identity=44.4444444444444, Blast_Score=75, Evalue=8e-15,
Organism=Homo sapiens, GI52426768, Length=104, Percent_Identity=32.6923076923077, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788877, Length=104, Percent_Identity=44.2307692307692, Blast_Score=85, Evalue=8e-19,
Organism=Escherichia coli, GI1786351, Length=104, Percent_Identity=38.4615384615385, Blast_Score=83, Evalue=3e-18,
Organism=Escherichia coli, GI1787974, Length=105, Percent_Identity=37.1428571428571, Blast_Score=76, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI25146411, Length=104, Percent_Identity=31.7307692307692, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI193209025, Length=104, Percent_Identity=31.7307692307692, Blast_Score=69, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6323001, Length=105, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24642263, Length=104, Percent_Identity=35.5769230769231, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24649697, Length=81, Percent_Identity=40.7407407407407, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 10978; Mature: 10978

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLTDSALNAVRTAIGSAGGPVGGLRIQVEAGGCAGYKYQMGLVVDAEPDDTVIEREGV
CCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCEEECCCC
KVFVDNKSHEYLAGTTIDFVVALEGSGFTFDNPNANNSCSCGKSFG
EEEEECCCCCEEECCEEEEEEEECCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MINLTDSALNAVRTAIGSAGGPVGGLRIQVEAGGCAGYKYQMGLVVDAEPDDTVIEREGV
CCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCEEECCCC
KVFVDNKSHEYLAGTTIDFVVALEGSGFTFDNPNANNSCSCGKSFG
EEEEECCCCCEEECCEEEEEEEECCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11157954; 12597275 [H]