Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is 158425032

Identifier: 158425032

GI number: 158425032

Start: 3936048

End: 3937730

Strand: Direct

Name: 158425032

Synonym: AZC_3408

Alternate gene names: NA

Gene position: 3936048-3937730 (Clockwise)

Preceding gene: 158425030

Following gene: 158425033

Centisome position: 73.3

GC content: 65.12

Gene sequence:

>1683_bases
ATGAAGCTTCAGATCGAACGGCCGCACCTCGAAGCCATGGTGGCGCGCTTTCCCGGCCTCAGCCCCTTGAAGGATCAACT
GCGCTTCGGCGACCGGGTGGAGGTGGGCTTCACCCAGCTCTCCGGCGACGAGATCGATTTCCTTCAGGATCTCTATCGTG
ACGGCGGGCCGGAGCTCGCGACCCGATCGGCCCAGATCGCGACGCTGCAACGGGCGTTCAACGACAAAAGTGTCAGGTTT
ACGTCGGATGCGTTGGAGGCCGTCCTGCCGGCCATCGCCGCCTATCTCGTGGACGGGGCGATCCAGGGCTGGCTGTTCAC
CGCCAGCGTCACCAGCCGCCCCCTGCCCTACGTGGTGACGCGTATCGATTACACCGCCCCCTCCAATGATGAGGCCGGGC
GCCTGTTCGTCGAGCTGAAGGCGAACGCCAAGGGCGCGCTCACCTCCAACACCTTGCGGATCTCGAGCGGCGACATCGCC
GGAAAGACGGTGGCGGAAATTCTGGCGGCCAAGGGGTTCGTCAAGGAAACGCCGGAGCTCATTGCCGCCTATGAGGCGAC
GGAAGCGCGCTATTTCGAGTGGCGCGGCCGCTATGGGGCCCAGTTCACCGGCACCGGCACGGCCTTCTATACGGAAGATC
CCAACGCCTCCCACCGCGACACCGACTGGTCGCGCAAGGATGTGGTGGTGCTCTCCGCCAGCGGCGGCCCGGCGCGGCTC
GTCAATGACGAGAGCATCCTGACCTCCCGCGCCCTGACGCTCGACGTGCCGGGCGACATCCTCGGCGCCTATCTGCGCAA
GGCGGCCAAGAGCAATCTCTATGACGCCGAAGACGAGGTGGAGCGGCAGAAGGCGGGCATCCCCGCCGGCCTGTTCAGCC
GCATTCCCATCCACCCCTACATCCTCATGTTCCACCTCGACCTGCACCATTATCTGTGGGTGCACGTGGACGACATGAAA
CCCTATGCCTACCAGCCGGACCTCAAGCACAAGCTGGTGCTGCCGGAGGAACAGACCGACCTGATCGACATCCTCACCGC
CGAGATGGACCTCTTGATGGATGACATCGTGGCCGGCAAATCGGGCGGCACCACCGTGCTCTGCGCCGGCCCTCCAGGCG
TCGGCAAGACGCTCACCGCCGAGGTCTATGCGGAGATCATCCAGCGCCCGCTCTATCGCGTGCATTCCGGCCAGCTGGGG
CTCAATGCGGCGGCCATGGAGGCGGCGCTGCGCGAGACGCTCACCCGCGCCCAGCGCTGGGGCGCGGTGATGCTGATCGA
CGAGGCCGACGTCTATATCAAGCGGCGGGAGGACGACATGACCATGAATGCGGTGGTCGGCGTCTTCCTGCGGGTGCTGG
AATATTTCAACGGCCTGCTGTTCCTCACCACCAACCGCATCGACGACATCGACGAGGCCATCGTCTCGCGCTGTATCGCG
CTCATCAAGTTTCACACGCCGGATGCCGCCGCCCGCCGGCGCATCTGGGACGTGATGGCGGAGCAGTTCGCGCTCGACCT
AGATGGGCAGCTCATCGACACGCTGGTGGAGACCTTTCCCGACGCCTCCGGCCGCGACATCAAGGGGCTCGCCAAGCTGG
TGGCGAAATATTGCCACCACAAGCAGGTGCCGGCGGGCCTTCCCGTATTCGAGCGTTGCGCAGTCTTCCGGGGCATGGCC
TGA

Upstream 100 bases:

>100_bases
ATCGGGGGCCGAAACCGGATGCGCCGCGCCGCCCCTTATGGCGCAAGGGTTGCATCGGATGACGCACCCCCATCTGCAAA
ACCCGAGGCTTTGTCCGCCC

Downstream 100 bases:

>100_bases
GGCCGGACAATCGGATGGCGGGCGGTGGCGCAAACCGCCCGTGTCGCAAAGGCGACAAGGGTCTGCTTCGCGACAGCAGC
AGCGACACTTCTGCAATGAT

Product: ATPase

Products: NA

Alternate protein names: AAA ATPase Central Domain Protein; ATPase; ATPase AAA Family Protein; AAA Family ATPase; AAA ATPase; AAA ATPase Central Domain-Containing Protein; AAA ATPase Central Region; AAA ATPase Family Protein; ATPase AAA Family; AAA-Family ATPase Protein; ATPases Of AAA+ Class; ATPase AAA Superfamily; ATPase Aaa Family; AAA+ Family ATPase; Elongation Factor P; ATPase Protein

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MKLQIERPHLEAMVARFPGLSPLKDQLRFGDRVEVGFTQLSGDEIDFLQDLYRDGGPELATRSAQIATLQRAFNDKSVRF
TSDALEAVLPAIAAYLVDGAIQGWLFTASVTSRPLPYVVTRIDYTAPSNDEAGRLFVELKANAKGALTSNTLRISSGDIA
GKTVAEILAAKGFVKETPELIAAYEATEARYFEWRGRYGAQFTGTGTAFYTEDPNASHRDTDWSRKDVVVLSASGGPARL
VNDESILTSRALTLDVPGDILGAYLRKAAKSNLYDAEDEVERQKAGIPAGLFSRIPIHPYILMFHLDLHHYLWVHVDDMK
PYAYQPDLKHKLVLPEEQTDLIDILTAEMDLLMDDIVAGKSGGTTVLCAGPPGVGKTLTAEVYAEIIQRPLYRVHSGQLG
LNAAAMEAALRETLTRAQRWGAVMLIDEADVYIKRREDDMTMNAVVGVFLRVLEYFNGLLFLTTNRIDDIDEAIVSRCIA
LIKFHTPDAAARRRIWDVMAEQFALDLDGQLIDTLVETFPDASGRDIKGLAKLVAKYCHHKQVPAGLPVFERCAVFRGMA

Sequences:

>Translated_560_residues
MKLQIERPHLEAMVARFPGLSPLKDQLRFGDRVEVGFTQLSGDEIDFLQDLYRDGGPELATRSAQIATLQRAFNDKSVRF
TSDALEAVLPAIAAYLVDGAIQGWLFTASVTSRPLPYVVTRIDYTAPSNDEAGRLFVELKANAKGALTSNTLRISSGDIA
GKTVAEILAAKGFVKETPELIAAYEATEARYFEWRGRYGAQFTGTGTAFYTEDPNASHRDTDWSRKDVVVLSASGGPARL
VNDESILTSRALTLDVPGDILGAYLRKAAKSNLYDAEDEVERQKAGIPAGLFSRIPIHPYILMFHLDLHHYLWVHVDDMK
PYAYQPDLKHKLVLPEEQTDLIDILTAEMDLLMDDIVAGKSGGTTVLCAGPPGVGKTLTAEVYAEIIQRPLYRVHSGQLG
LNAAAMEAALRETLTRAQRWGAVMLIDEADVYIKRREDDMTMNAVVGVFLRVLEYFNGLLFLTTNRIDDIDEAIVSRCIA
LIKFHTPDAAARRRIWDVMAEQFALDLDGQLIDTLVETFPDASGRDIKGLAKLVAKYCHHKQVPAGLPVFERCAVFRGMA
>Mature_560_residues
MKLQIERPHLEAMVARFPGLSPLKDQLRFGDRVEVGFTQLSGDEIDFLQDLYRDGGPELATRSAQIATLQRAFNDKSVRF
TSDALEAVLPAIAAYLVDGAIQGWLFTASVTSRPLPYVVTRIDYTAPSNDEAGRLFVELKANAKGALTSNTLRISSGDIA
GKTVAEILAAKGFVKETPELIAAYEATEARYFEWRGRYGAQFTGTGTAFYTEDPNASHRDTDWSRKDVVVLSASGGPARL
VNDESILTSRALTLDVPGDILGAYLRKAAKSNLYDAEDEVERQKAGIPAGLFSRIPIHPYILMFHLDLHHYLWVHVDDMK
PYAYQPDLKHKLVLPEEQTDLIDILTAEMDLLMDDIVAGKSGGTTVLCAGPPGVGKTLTAEVYAEIIQRPLYRVHSGQLG
LNAAAMEAALRETLTRAQRWGAVMLIDEADVYIKRREDDMTMNAVVGVFLRVLEYFNGLLFLTTNRIDDIDEAIVSRCIA
LIKFHTPDAAARRRIWDVMAEQFALDLDGQLIDTLVETFPDASGRDIKGLAKLVAKYCHHKQVPAGLPVFERCAVFRGMA

Specific function: Unknown

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61922; Mature: 61922

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQIERPHLEAMVARFPGLSPLKDQLRFGDRVEVGFTQLSGDEIDFLQDLYRDGGPELA
CCEEECCCHHHHHHHHCCCCCCHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCHH
TRSAQIATLQRAFNDKSVRFTSDALEAVLPAIAAYLVDGAIQGWLFTASVTSRPLPYVVT
HCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCEEEE
RIDYTAPSNDEAGRLFVELKANAKGALTSNTLRISSGDIAGKTVAEILAAKGFVKETPEL
EEEECCCCCCCCCEEEEEEECCCCCCEECCEEEECCCCCCHHHHHHHHHHCCHHHCCHHH
IAAYEATEARYFEWRGRYGAQFTGTGTAFYTEDPNASHRDTDWSRKDVVVLSASGGPARL
HHHHHHHHHHHEEECCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEE
VNDESILTSRALTLDVPGDILGAYLRKAAKSNLYDAEDEVERQKAGIPAGLFSRIPIHPY
ECCHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHCCCCCCE
ILMFHLDLHHYLWVHVDDMKPYAYQPDLKHKLVLPEEQTDLIDILTAEMDLLMDDIVAGK
EEEEEEECCEEEEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
SGGTTVLCAGPPGVGKTLTAEVYAEIIQRPLYRVHSGQLGLNAAAMEAALRETLTRAQRW
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
GAVMLIDEADVYIKRREDDMTMNAVVGVFLRVLEYFNGLLFLTTNRIDDIDEAIVSRCIA
CEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHH
LIKFHTPDAAARRRIWDVMAEQFALDLDGQLIDTLVETFPDASGRDIKGLAKLVAKYCHH
HHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
KQVPAGLPVFERCAVFRGMA
CCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKLQIERPHLEAMVARFPGLSPLKDQLRFGDRVEVGFTQLSGDEIDFLQDLYRDGGPELA
CCEEECCCHHHHHHHHCCCCCCHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCHH
TRSAQIATLQRAFNDKSVRFTSDALEAVLPAIAAYLVDGAIQGWLFTASVTSRPLPYVVT
HCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCEEEE
RIDYTAPSNDEAGRLFVELKANAKGALTSNTLRISSGDIAGKTVAEILAAKGFVKETPEL
EEEECCCCCCCCCEEEEEEECCCCCCEECCEEEECCCCCCHHHHHHHHHHCCHHHCCHHH
IAAYEATEARYFEWRGRYGAQFTGTGTAFYTEDPNASHRDTDWSRKDVVVLSASGGPARL
HHHHHHHHHHHEEECCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEE
VNDESILTSRALTLDVPGDILGAYLRKAAKSNLYDAEDEVERQKAGIPAGLFSRIPIHPY
ECCHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHCCCCCCE
ILMFHLDLHHYLWVHVDDMKPYAYQPDLKHKLVLPEEQTDLIDILTAEMDLLMDDIVAGK
EEEEEEECCEEEEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
SGGTTVLCAGPPGVGKTLTAEVYAEIIQRPLYRVHSGQLGLNAAAMEAALRETLTRAQRW
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
GAVMLIDEADVYIKRREDDMTMNAVVGVFLRVLEYFNGLLFLTTNRIDDIDEAIVSRCIA
CEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHH
LIKFHTPDAAARRRIWDVMAEQFALDLDGQLIDTLVETFPDASGRDIKGLAKLVAKYCHH
HHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
KQVPAGLPVFERCAVFRGMA
CCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA