| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424986
Identifier: 158424986
GI number: 158424986
Start: 3890413
End: 3891504
Strand: Reverse
Name: 158424986
Synonym: AZC_3362
Alternate gene names: NA
Gene position: 3891504-3890413 (Counterclockwise)
Preceding gene: 158424987
Following gene: 158424981
Centisome position: 72.47
GC content: 62.91
Gene sequence:
>1092_bases ATGAAACGTCGTGATTTTCTTGCTTCCGCAGGTGCCGGTGTCGCGGCTTCTGCCGCTGTGGCCATGCCGGCGATCGCGCA GTCCGCGCCCGAGGTGAAGTGGCGCTGCACGTCGTCCTTCCCGAAGTCGCTGGACACCATCTATGGCGCCGCCGAGCTGA TGTCCAAGACGGTCGCGGAAGCGACCGACGGCAAGTTCCAGATCCAGGTGTTCGCGGCCGGCGAAATCGTGCCCGGCCTG CAGGCCCTCGACGCGACGCAGAACAAGACCGTCGAGATGTGCCACACGGCGTCCTATTACTATGTGGGCAAGGATCCGAC TTTCGCCTTCGGCTCGGCGTTCCCGTTCGGCCTCAATGCACGCCAGATCAATGCGTGGTTCTACCACGGCGGCGGCCTTG AGCTGCTGAACGAGTTCTACAAGAAGTACGGCGTCTACATGCTGCCCGGCGGCAACACCGGCGGCCAGATGGGCGGCTGG TTCCGCAAGGAGATCAAGACCACCCAGGATCTCCAGGGCCTGAAGATGCGAATCGCGGGGATCGCCGGCCAGATCCTGGC CAAGCTCGGCGTGGTCCCGCAGCAGCTCGCCGGCGGCGACATCTATCCGGCGCTCGAAAAGGGCACCATCGATGCGGCCG AGTGGGTCGGCCCCTATGACGACGAGAAGCTCGGCCTCCAGAAGGTGGCGCAGTATTATTATTATCCCGGCTGGTGGGAA GGCTGCGCCTCGCTGACCTTCTTCTACAACCAGGAAAAGTGGAACGAGCTGCCCAAGAACTACCAGGCCATCCTGCGTTC GGCGGCCGCTCAGGCCAATGGCGACATGCTGGCCAATTACGACACCAAGAACCCCGCCGCCGTGCAGCGGCTGGTGAAGG CGGGTGCCCAGCTGCGCCGCTTCCCCAATGAGATGATGGATGCCAGCTACAAGGCGGCCCAGGAACTCTATGAGGAAATC GGCGCCAAGAACCCGGACTTCAAGAAGGTGCACGATCACGCCAAGGCGTTCCGCAACGAGGAATACCTGTGGTGGCAGAT CGTTGAATACACCTACGACGACTACATGGTGCGCGCCCGCACCCGCGGCTGA
Upstream 100 bases:
>100_bases CAGACCGGGAAAAGCCATTAGAAGAAAGTCGAGGATGACCTCGGGTCAGGGAGCCTTTAGTTCTCTGACACGCAATAAAA TGTCCAGGGAGCCGCCATCC
Downstream 100 bases:
>100_bases GCAATTCCCGCCTCGGGCGGGGTAAAGCAGACCACAGACGGCCCGGATGGTGACATCCGGGCCGTTTGCATTTCACATGG GCGTTGGAACTCGCGGTGGT
Product: twin-arginine translocation pathway signal precursor
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MKRRDFLASAGAGVAASAAVAMPAIAQSAPEVKWRCTSSFPKSLDTIYGAAELMSKTVAEATDGKFQIQVFAAGEIVPGL QALDATQNKTVEMCHTASYYYVGKDPTFAFGSAFPFGLNARQINAWFYHGGGLELLNEFYKKYGVYMLPGGNTGGQMGGW FRKEIKTTQDLQGLKMRIAGIAGQILAKLGVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGLQKVAQYYYYPGWWE GCASLTFFYNQEKWNELPKNYQAILRSAAAQANGDMLANYDTKNPAAVQRLVKAGAQLRRFPNEMMDASYKAAQELYEEI GAKNPDFKKVHDHAKAFRNEEYLWWQIVEYTYDDYMVRARTRG
Sequences:
>Translated_363_residues MKRRDFLASAGAGVAASAAVAMPAIAQSAPEVKWRCTSSFPKSLDTIYGAAELMSKTVAEATDGKFQIQVFAAGEIVPGL QALDATQNKTVEMCHTASYYYVGKDPTFAFGSAFPFGLNARQINAWFYHGGGLELLNEFYKKYGVYMLPGGNTGGQMGGW FRKEIKTTQDLQGLKMRIAGIAGQILAKLGVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGLQKVAQYYYYPGWWE GCASLTFFYNQEKWNELPKNYQAILRSAAAQANGDMLANYDTKNPAAVQRLVKAGAQLRRFPNEMMDASYKAAQELYEEI GAKNPDFKKVHDHAKAFRNEEYLWWQIVEYTYDDYMVRARTRG >Mature_363_residues MKRRDFLASAGAGVAASAAVAMPAIAQSAPEVKWRCTSSFPKSLDTIYGAAELMSKTVAEATDGKFQIQVFAAGEIVPGL QALDATQNKTVEMCHTASYYYVGKDPTFAFGSAFPFGLNARQINAWFYHGGGLELLNEFYKKYGVYMLPGGNTGGQMGGW FRKEIKTTQDLQGLKMRIAGIAGQILAKLGVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGLQKVAQYYYYPGWWE GCASLTFFYNQEKWNELPKNYQAILRSAAAQANGDMLANYDTKNPAAVQRLVKAGAQLRRFPNEMMDASYKAAQELYEEI GAKNPDFKKVHDHAKAFRNEEYLWWQIVEYTYDDYMVRARTRG
Specific function: Unknown
COG id: COG4663
COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40374; Mature: 40374
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRDFLASAGAGVAASAAVAMPAIAQSAPEVKWRCTSSFPKSLDTIYGAAELMSKTVAE CCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH ATDGKFQIQVFAAGEIVPGLQALDATQNKTVEMCHTASYYYVGKDPTFAFGSAFPFGLNA CCCCEEEEEEEECCCCCCCHHHHCCCCCCHHHHEECCEEEEECCCCCEECCCCCCCCCCC RQINAWFYHGGGLELLNEFYKKYGVYMLPGGNTGGQMGGWFRKEIKTTQDLQGLKMRIAG EEEEEEEEECCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH IAGQILAKLGVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGLQKVAQYYYYPGWWE HHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCHHH GCASLTFFYNQEKWNELPKNYQAILRSAAAQANGDMLANYDTKNPAAVQRLVKAGAQLRR HHHHHHEEECHHHHHHCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHH FPNEMMDASYKAAQELYEEIGAKNPDFKKVHDHAKAFRNEEYLWWQIVEYTYDDYMVRAR CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEEHHHCCEEEEEE TRG CCC >Mature Secondary Structure MKRRDFLASAGAGVAASAAVAMPAIAQSAPEVKWRCTSSFPKSLDTIYGAAELMSKTVAE CCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH ATDGKFQIQVFAAGEIVPGLQALDATQNKTVEMCHTASYYYVGKDPTFAFGSAFPFGLNA CCCCEEEEEEEECCCCCCCHHHHCCCCCCHHHHEECCEEEEECCCCCEECCCCCCCCCCC RQINAWFYHGGGLELLNEFYKKYGVYMLPGGNTGGQMGGWFRKEIKTTQDLQGLKMRIAG EEEEEEEEECCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH IAGQILAKLGVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGLQKVAQYYYYPGWWE HHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCHHH GCASLTFFYNQEKWNELPKNYQAILRSAAAQANGDMLANYDTKNPAAVQRLVKAGAQLRR HHHHHHEEECHHHHHHCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHH FPNEMMDASYKAAQELYEEIGAKNPDFKKVHDHAKAFRNEEYLWWQIVEYTYDDYMVRAR CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEEHHHCCEEEEEE TRG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA