| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424979
Identifier: 158424979
GI number: 158424979
Start: 3884144
End: 3885160
Strand: Reverse
Name: 158424979
Synonym: AZC_3355
Alternate gene names: NA
Gene position: 3885160-3884144 (Counterclockwise)
Preceding gene: 158424980
Following gene: 158424978
Centisome position: 72.35
GC content: 65.19
Gene sequence:
>1017_bases TTGATCATAAGACCAGTAAAAACGGGCGTTCAGGAGGAAACCATGAACCGCGTGTCCCGCAGGGCCTGCCTTGCCACGCT GGGTGGCGCCGCTGCCGCCGCAAGCCTGCCGTCGTTCGCGCGCGCGCAGAACCGGACGGGTGCCGATGCGCCGACCATTC TCCCGCCGGATCCGAATACGAAGACACCGGCCTACAAGGCGCCGGCCGGCGCGGTGGATGCCCACACCCACATCTTTGGC CCAGGCTCGAAATATCCCTATGCGGCGAGCCGCAGCTACACGCCGCCGGACGCGCCTCTGGAGATGTTCGAGGCGCTGCA CGCCAAGATCGGTATCGAGCGCGCGGTGCTCGTCAACGCCACGGTTCACGGTCTCGACAACCGGGTCATCACCGATGCCA TCGCCCAGAGCAACGGGCGCTACAAGGGCATCGCCAATGTGGACGATACCATCACCGACAAGGAGCTTCAGGCCCTGACG GACGCGGGCATGAAGGGCTGCCGCTTCACCTTCCTCGGCCGCCTTGGCGGGCGGCCGGACATGACGAAATTCCACAGGAT CGTCGACAGGATCAAGGCTTACGGCTGGCACGTGGACCTCTATCTCGAACCCGAGATCATCGAGGAGTTCGTGCCGATCC TGCGCGCGCTGCCACTGCCCTATGTCATCGACCACATGGGAACGGTGAAGGCCTCGGGCGGGCTGGAGCAGAAGCCCTTC GTGGCACTCGTCGAGCTCATGCGGACGGACGAAAAGGGTTGGATCAAGATCACCGGTCCCGAGCGCCTGTCTGTGGCCGG CTCGCCCTTCCATGATGCGGTGCCCTTTGCACAGGCGCTCATCGCCGCGGCGCCCGACCGGTGCCTCTGGGGCACGGACT GGCCCCACCCGAACGTGAAGGTGATGCCGAACGACGGCGTGCTCGTCGATCTCATTCCGCTCTATGCCCCGGACGTGGCC CAGCAGCACCGGCTGCTCGTGGACAATCCGGTGCGGCTGTTCGGGTTTTCCTCCTGA
Upstream 100 bases:
>100_bases GGGAGGCTGCCGACATGGTGGCCGACCTCGGCTTCGCGCCGGACCTCGTGCGTGCGGTGGCGGAGGCCCAGCAGCGCGGG GCCAAGGCGAAGCCCGCCCA
Downstream 100 bases:
>100_bases TCATCACCCAGTCAACCACCCGCTAGGCGCGTCATGACCCTCCAGACCGGTCCCATCAAGTCCATCCCCGGCCCCGATTC GAATACGCGGACGCCGGCTT
Product: dicarboxylic acid hydrolase
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; (2-Pyrone-4 6-)Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MIIRPVKTGVQEETMNRVSRRACLATLGGAAAAASLPSFARAQNRTGADAPTILPPDPNTKTPAYKAPAGAVDAHTHIFG PGSKYPYAASRSYTPPDAPLEMFEALHAKIGIERAVLVNATVHGLDNRVITDAIAQSNGRYKGIANVDDTITDKELQALT DAGMKGCRFTFLGRLGGRPDMTKFHRIVDRIKAYGWHVDLYLEPEIIEEFVPILRALPLPYVIDHMGTVKASGGLEQKPF VALVELMRTDEKGWIKITGPERLSVAGSPFHDAVPFAQALIAAAPDRCLWGTDWPHPNVKVMPNDGVLVDLIPLYAPDVA QQHRLLVDNPVRLFGFSS
Sequences:
>Translated_338_residues MIIRPVKTGVQEETMNRVSRRACLATLGGAAAAASLPSFARAQNRTGADAPTILPPDPNTKTPAYKAPAGAVDAHTHIFG PGSKYPYAASRSYTPPDAPLEMFEALHAKIGIERAVLVNATVHGLDNRVITDAIAQSNGRYKGIANVDDTITDKELQALT DAGMKGCRFTFLGRLGGRPDMTKFHRIVDRIKAYGWHVDLYLEPEIIEEFVPILRALPLPYVIDHMGTVKASGGLEQKPF VALVELMRTDEKGWIKITGPERLSVAGSPFHDAVPFAQALIAAAPDRCLWGTDWPHPNVKVMPNDGVLVDLIPLYAPDVA QQHRLLVDNPVRLFGFSS >Mature_338_residues MIIRPVKTGVQEETMNRVSRRACLATLGGAAAAASLPSFARAQNRTGADAPTILPPDPNTKTPAYKAPAGAVDAHTHIFG PGSKYPYAASRSYTPPDAPLEMFEALHAKIGIERAVLVNATVHGLDNRVITDAIAQSNGRYKGIANVDDTITDKELQALT DAGMKGCRFTFLGRLGGRPDMTKFHRIVDRIKAYGWHVDLYLEPEIIEEFVPILRALPLPYVIDHMGTVKASGGLEQKPF VALVELMRTDEKGWIKITGPERLSVAGSPFHDAVPFAQALIAAAPDRCLWGTDWPHPNVKVMPNDGVLVDLIPLYAPDVA QQHRLLVDNPVRLFGFSS
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36741; Mature: 36741
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIRPVKTGVQEETMNRVSRRACLATLGGAAAAASLPSFARAQNRTGADAPTILPPDPNT CEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHCCCCCCCCCEECCCCCCC KTPAYKAPAGAVDAHTHIFGPGSKYPYAASRSYTPPDAPLEMFEALHAKIGIERAVLVNA CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEH TVHGLDNRVITDAIAQSNGRYKGIANVDDTITDKELQALTDAGMKGCRFTFLGRLGGRPD HHHCCCCHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHCCCCCC MTKFHRIVDRIKAYGWHVDLYLEPEIIEEFVPILRALPLPYVIDHMGTVKASGGLEQKPF HHHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHCCCCHHHHCCCCEECCCCCCCCHH VALVELMRTDEKGWIKITGPERLSVAGSPFHDAVPFAQALIAAAPDRCLWGTDWPHPNVK HHHHHHHHCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE VMPNDGVLVDLIPLYAPDVAQQHRLLVDNPVRLFGFSS EECCCCEEEEEHHHCCCCHHHHCCEEECCCEEEEECCC >Mature Secondary Structure MIIRPVKTGVQEETMNRVSRRACLATLGGAAAAASLPSFARAQNRTGADAPTILPPDPNT CEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHCCCCCCCCCEECCCCCCC KTPAYKAPAGAVDAHTHIFGPGSKYPYAASRSYTPPDAPLEMFEALHAKIGIERAVLVNA CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEH TVHGLDNRVITDAIAQSNGRYKGIANVDDTITDKELQALTDAGMKGCRFTFLGRLGGRPD HHHCCCCHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHCCCCCC MTKFHRIVDRIKAYGWHVDLYLEPEIIEEFVPILRALPLPYVIDHMGTVKASGGLEQKPF HHHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHCCCCHHHHCCCCEECCCCCCCCHH VALVELMRTDEKGWIKITGPERLSVAGSPFHDAVPFAQALIAAAPDRCLWGTDWPHPNVK HHHHHHHHCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE VMPNDGVLVDLIPLYAPDVAQQHRLLVDNPVRLFGFSS EECCCCEEEEEHHHCCCCHHHHCCEEECCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA