| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424978
Identifier: 158424978
GI number: 158424978
Start: 3883217
End: 3884110
Strand: Reverse
Name: 158424978
Synonym: AZC_3354
Alternate gene names: NA
Gene position: 3884110-3883217 (Counterclockwise)
Preceding gene: 158424979
Following gene: 158424977
Centisome position: 72.33
GC content: 66.0
Gene sequence:
>894_bases ATGACCCTCCAGACCGGTCCCATCAAGTCCATCCCCGGCCCCGATTCGAATACGCGGACGCCGGCTTTCAAGCTGCCGCC CCTCTCCTGCGACACCCACTGCCACATCTTCGGGCCGGGCGACGTCTATCCCTACGACCCCAAGCGCTCCTATACCCCGC CGGATGCGCCGCTGCCTGCCTTCAAGGCCCTCCATGCCAAGCTCGGCGTGGAGCGGGCAGTCATCGTCAATGCCAGCGTC CACGGCACCGACAACCGCGTCGCGCTCGACGCCATCGCCCAGAGCAACGGGCGCTACCGGGCGGTCGCCAATATCGACGG CACCATCGACGAGAAGGGCATCGAGGAACTGCACGAGGGCGGCTTCCGTGGCTGCCGCTTCAATTTCGTGCGCCACCTCG GCGGCGTGCCGGACATGAAGGTGTTCGACCGCATCGTGGCCATGGTCACCCCCTTCGGCTGGCATATCGACCTGCATTTC GACGCGATCGACCTGCCGCAATATGCCGACATGCTTTCCCGCCTGCCGGTTCCCTACACCATCGATCACATGGGCCGGGT GCAGGCGAACGAGGGCCTCGACCAGTTGCCCTTCCGCACCCTCATCGACCTCATGGAGCGCGACGAGAAGTGCTGGGTGA AGATCTGTGGCGCCGAGCGCGTGTCGACCGCCGGTCCCCCCTTCCATGATGCGGTGCCGTTCGCGCGCAAGATCCTCGAG ACCGCACCGGACCGCGTGATCTGGGGCACCGACTGGCCGCATCCCAACGTGAAGGTGATGCCCAACGACGGCGACCTCGT GGACCTCATCCCGCTCTTCGCCCCCGAGCCGGAGCTCCAGCACAAGGTGCTGGTGGAGAACCCGGCCCGCCTCTTCGATT TCAACGACGCCTGA
Upstream 100 bases:
>100_bases GGACGTGGCCCAGCAGCACCGGCTGCTCGTGGACAATCCGGTGCGGCTGTTCGGGTTTTCCTCCTGATCATCACCCAGTC AACCACCCGCTAGGCGCGTC
Downstream 100 bases:
>100_bases GCCAACAGGCGCTGACCGGGAGACGCCCCAATGTCCGTCACGCATGCCGCAACGCCGGTCAAGGCACCGGCCAAGACCCG GCCGTGGTATGCCCAACTCT
Product: dicarboxylic acid hydrolase
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; (2-Pyrone-4 6-)Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; PDC Hydrolase-Like Protein; Exported Protein
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTLQTGPIKSIPGPDSNTRTPAFKLPPLSCDTHCHIFGPGDVYPYDPKRSYTPPDAPLPAFKALHAKLGVERAVIVNASV HGTDNRVALDAIAQSNGRYRAVANIDGTIDEKGIEELHEGGFRGCRFNFVRHLGGVPDMKVFDRIVAMVTPFGWHIDLHF DAIDLPQYADMLSRLPVPYTIDHMGRVQANEGLDQLPFRTLIDLMERDEKCWVKICGAERVSTAGPPFHDAVPFARKILE TAPDRVIWGTDWPHPNVKVMPNDGDLVDLIPLFAPEPELQHKVLVENPARLFDFNDA
Sequences:
>Translated_297_residues MTLQTGPIKSIPGPDSNTRTPAFKLPPLSCDTHCHIFGPGDVYPYDPKRSYTPPDAPLPAFKALHAKLGVERAVIVNASV HGTDNRVALDAIAQSNGRYRAVANIDGTIDEKGIEELHEGGFRGCRFNFVRHLGGVPDMKVFDRIVAMVTPFGWHIDLHF DAIDLPQYADMLSRLPVPYTIDHMGRVQANEGLDQLPFRTLIDLMERDEKCWVKICGAERVSTAGPPFHDAVPFARKILE TAPDRVIWGTDWPHPNVKVMPNDGDLVDLIPLFAPEPELQHKVLVENPARLFDFNDA >Mature_296_residues TLQTGPIKSIPGPDSNTRTPAFKLPPLSCDTHCHIFGPGDVYPYDPKRSYTPPDAPLPAFKALHAKLGVERAVIVNASVH GTDNRVALDAIAQSNGRYRAVANIDGTIDEKGIEELHEGGFRGCRFNFVRHLGGVPDMKVFDRIVAMVTPFGWHIDLHFD AIDLPQYADMLSRLPVPYTIDHMGRVQANEGLDQLPFRTLIDLMERDEKCWVKICGAERVSTAGPPFHDAVPFARKILET APDRVIWGTDWPHPNVKVMPNDGDLVDLIPLFAPEPELQHKVLVENPARLFDFNDA
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33038; Mature: 32907
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQTGPIKSIPGPDSNTRTPAFKLPPLSCDTHCHIFGPGDVYPYDPKRSYTPPDAPLPA CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHH FKALHAKLGVERAVIVNASVHGTDNRVALDAIAQSNGRYRAVANIDGTIDEKGIEELHEG HHHHHHHHCCCEEEEEEEEECCCCCEEEEEHHHCCCCCEEEEECCCCCCCHHHHHHHHHC GFRGCRFNFVRHLGGVPDMKVFDRIVAMVTPFGWHIDLHFDAIDLPQYADMLSRLPVPYT CCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCEE IDHMGRVQANEGLDQLPFRTLIDLMERDEKCWVKICGAERVSTAGPPFHDAVPFARKILE CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH TAPDRVIWGTDWPHPNVKVMPNDGDLVDLIPLFAPEPELQHKVLVENPARLFDFNDA HCCCCEEECCCCCCCCCEEECCCCCEEEEHHCCCCCCCCCCEEEECCCHHEECCCCC >Mature Secondary Structure TLQTGPIKSIPGPDSNTRTPAFKLPPLSCDTHCHIFGPGDVYPYDPKRSYTPPDAPLPA CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHH FKALHAKLGVERAVIVNASVHGTDNRVALDAIAQSNGRYRAVANIDGTIDEKGIEELHEG HHHHHHHHCCCEEEEEEEEECCCCCEEEEEHHHCCCCCEEEEECCCCCCCHHHHHHHHHC GFRGCRFNFVRHLGGVPDMKVFDRIVAMVTPFGWHIDLHFDAIDLPQYADMLSRLPVPYT CCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCEE IDHMGRVQANEGLDQLPFRTLIDLMERDEKCWVKICGAERVSTAGPPFHDAVPFARKILE CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH TAPDRVIWGTDWPHPNVKVMPNDGDLVDLIPLFAPEPELQHKVLVENPARLFDFNDA HCCCCEEECCCCCCCCCEEECCCCCEEEEHHCCCCCCCCCCEEEECCCHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA