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The map label for this gene is gntR [C]

Identifier: 158424965

GI number: 158424965

Start: 3868187

End: 3869128

Strand: Direct

Name: gntR [C]

Synonym: AZC_3341

Alternate gene names: 158424965

Gene position: 3868187-3869128 (Clockwise)

Preceding gene: 158424963

Following gene: 158424966

Centisome position: 72.04

GC content: 69.11

Gene sequence:

>942_bases
GTGCCAGCGGAGCCGGCATTTGCGCGGTGGACGGAGGGGCTTGAGGCCACGGGCCTCGCCAAGCGCGTGCGCGCCATTCC
AGCCTCCGCGCGCATCCATGCCGCCTTGCGCGAGCAGATCATCGGCATGGAAATCGCCCCCGGATCCGCGCTTCAGGAGA
AGCAGATCGCGCTCGCCTGCGGCGTCAGCCGCACACCGGTGCGCGAGGCGCTGCTGAAGCTCGCGGACGAGCGGCTGGTG
GACATTTTCCCGCAGTACGGCACCTTCGTCTCACGCATCTCCGTCCCCGCCATGCACGACGCCATGGTGATCCGCGATGC
GCTGGAGCGCGCGGCCGTGCGCGGCGCCGCCATCGCCGCCACCGATGCCGCCATCGCCCGACTGCGTAATATCCTCACCG
AGCAGCGCACCACGCACGAGGCAGGGCACCTCACCGCCTTCCACGCGGCGGACGAGACCTTCCATCAGGCCATCGCCGAG
ATCGCCGGGCACCCCAATCTCTGGCGCGTGGTGCGGCAGGAGAAGGCCCATGTGGACCGGTGCCGCATTCTCTCCCTGCC
CTCTCCCAGCCGCCGTATCGACGTGATGGCGGACCACGAGGCCATCTTCGAAGGCATCGCCTCGCGCGATCCGGACAAGG
CCGAGGCCGCGATGCGGGCGCATCTGGATCAGGTGCTGCCCTCGGTCGGAATGCTGGTGAAAGCGCATCCCGGCTATTTC
GAGGGCGTCGATCAGGCCCCCGTCGCGCCCGTCCATGCGGACGGCACGCCGGTTCAGCCCGCGCCCGTCAATGGCACGAC
AAGCGCGCCCAAGGCGAACGGAACCCGCACCCGGCGCGTGAAGGCTGAAGCGGTCCTCGCGGTGGCGGACGCAGAGCTCA
AGGCGTCGCGGCAGACGACGCGCAAAACCTCATCAAAAACGCCCCGGGAAAGGACACGTTGA

Upstream 100 bases:

>100_bases
CAGCTCATCCATTGGTCTACCTCCCGCAGCGTTATCGTTGACGGCGTTGATATGCTAATATATTAGCATCGCAAAACATC
ACAAGTGGAAGCGAGGAAAC

Downstream 100 bases:

>100_bases
GCCCATGGCGAGCCCCCTCATCCACCCCGACCGCCTGTTTCCCGCCGACCCCGCCGTGCGCGCGGTGGCGCGGCGCCTCT
ATGAACAGGTGGCGGACCTG

Product: regulatory protein

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MPAEPAFARWTEGLEATGLAKRVRAIPASARIHAALREQIIGMEIAPGSALQEKQIALACGVSRTPVREALLKLADERLV
DIFPQYGTFVSRISVPAMHDAMVIRDALERAAVRGAAIAATDAAIARLRNILTEQRTTHEAGHLTAFHAADETFHQAIAE
IAGHPNLWRVVRQEKAHVDRCRILSLPSPSRRIDVMADHEAIFEGIASRDPDKAEAAMRAHLDQVLPSVGMLVKAHPGYF
EGVDQAPVAPVHADGTPVQPAPVNGTTSAPKANGTRTRRVKAEAVLAVADAELKASRQTTRKTSSKTPRERTR

Sequences:

>Translated_313_residues
MPAEPAFARWTEGLEATGLAKRVRAIPASARIHAALREQIIGMEIAPGSALQEKQIALACGVSRTPVREALLKLADERLV
DIFPQYGTFVSRISVPAMHDAMVIRDALERAAVRGAAIAATDAAIARLRNILTEQRTTHEAGHLTAFHAADETFHQAIAE
IAGHPNLWRVVRQEKAHVDRCRILSLPSPSRRIDVMADHEAIFEGIASRDPDKAEAAMRAHLDQVLPSVGMLVKAHPGYF
EGVDQAPVAPVHADGTPVQPAPVNGTTSAPKANGTRTRRVKAEAVLAVADAELKASRQTTRKTSSKTPRERTR
>Mature_312_residues
PAEPAFARWTEGLEATGLAKRVRAIPASARIHAALREQIIGMEIAPGSALQEKQIALACGVSRTPVREALLKLADERLVD
IFPQYGTFVSRISVPAMHDAMVIRDALERAAVRGAAIAATDAAIARLRNILTEQRTTHEAGHLTAFHAADETFHQAIAEI
AGHPNLWRVVRQEKAHVDRCRILSLPSPSRRIDVMADHEAIFEGIASRDPDKAEAAMRAHLDQVLPSVGMLVKAHPGYFE
GVDQAPVAPVHADGTPVQPAPVNGTTSAPKANGTRTRRVKAEAVLAVADAELKASRQTTRKTSSKTPRERTR

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=214, Percent_Identity=35.5140186915888, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 33843; Mature: 33712

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAEPAFARWTEGLEATGLAKRVRAIPASARIHAALREQIIGMEIAPGSALQEKQIALAC
CCCCCCHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHC
GVSRTPVREALLKLADERLVDIFPQYGTFVSRISVPAMHDAMVIRDALERAAVRGAAIAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHH
TDAAIARLRNILTEQRTTHEAGHLTAFHAADETFHQAIAEIAGHPNLWRVVRQEKAHVDR
HHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
CRILSLPSPSRRIDVMADHEAIFEGIASRDPDKAEAAMRAHLDQVLPSVGMLVKAHPGYF
HEEECCCCCCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHH
EGVDQAPVAPVHADGTPVQPAPVNGTTSAPKANGTRTRRVKAEAVLAVADAELKASRQTT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEHHHHHEEHHHHHHHHHHHHH
RKTSSKTPRERTR
HHHCCCCCHHCCC
>Mature Secondary Structure 
PAEPAFARWTEGLEATGLAKRVRAIPASARIHAALREQIIGMEIAPGSALQEKQIALAC
CCCCCHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHC
GVSRTPVREALLKLADERLVDIFPQYGTFVSRISVPAMHDAMVIRDALERAAVRGAAIAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHH
TDAAIARLRNILTEQRTTHEAGHLTAFHAADETFHQAIAEIAGHPNLWRVVRQEKAHVDR
HHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
CRILSLPSPSRRIDVMADHEAIFEGIASRDPDKAEAAMRAHLDQVLPSVGMLVKAHPGYF
HEEECCCCCCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHH
EGVDQAPVAPVHADGTPVQPAPVNGTTSAPKANGTRTRRVKAEAVLAVADAELKASRQTT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEHHHHHEEHHHHHHHHHHHHH
RKTSSKTPRERTR
HHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8277241; 1612449 [H]