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The map label for this gene is ygiK [H]

Identifier: 158424960

GI number: 158424960

Start: 3862774

End: 3864054

Strand: Reverse

Name: ygiK [H]

Synonym: AZC_3336

Alternate gene names: 158424960

Gene position: 3864054-3862774 (Counterclockwise)

Preceding gene: 158424961

Following gene: 158424959

Centisome position: 71.96

GC content: 63.78

Gene sequence:

>1281_bases
ATGGCCATGACCATCCTTTTCGGCGTCTTCACGGCGCTGCTCCTGCTCGGCACGCCGGTGGCCTTCTGCCTCGGCCTCGC
CTCCATCGCCACCGTGCTCTATCTGGACCTACCGCCCATGGTGGTGTTCCAGCAGATCAATTCTAACATGAACGCCTTCG
CCATGCTGGCGATCCCGTTCTTCATCTTCGCCGGCGACCTGATGATGCGCGGCGGCATCGCGGATCGCCTTATCGGCATG
GCCGCCTCCATGTTCGGCCACTTGCGCGGCGGGCTCGGGCAGGTGAATGTGGTGGCATCCTTCCTGTTCGGTGGGGTGTC
CGGCTCGGCGGTGGCGGATGCCTCGGCCATCGGCGGCATCATGATCCCCCAGATGGCCAAGCACGGCTATTCGCGGGATT
TCGCGGTGAACGTGACGGTGAATGCCGCCATCATCGCACTGCTCGTGCCGCCCTCCCATAATATGATCATCTATTCGCTG
GCGGCGGGCGGCACCATCTCCATCGCCGACCTGTTCACGGCGGGCATCCTGCCGGGCATCCTGCTGGCGGCGGCGCTGAT
GATCACGGCCTATATCGTCGCCCGCAACCGCGGCTATCCTTCGGGCATCTTTCCCGGCTGGTATGGCGTGCTGCGCGCGG
TCGTGGTGGCCGCGCCGGGCATCATCCTCATTGCGATCATCTTCGGCGGCGTGCGCTCGGGCATCTTCACCGCGACGGAA
AGCTCCTGCATCGCGGTCATCTATTCGTTGCTGATCACGCTCCTCGTCTATCGCGAATTGAACTGGGATGCCTTCGTCCA
CGCCACGCTCGGCGCCGTGCGCACCACCGCCATGGTGCTGCTGGTCATCGGCACGGCGGGCGCCTTCGGCTGGCTCATGG
CCTTCCTTCAGGTGCCGGCCGCCACCATCGAGCTGATGCAGTCCATCTCGTCCAACAAATACGTGATCCTGCTGCTCATC
AATATCCTGCTGCTGGTGCTGGGCACGTTCATGGACATGGCGCCCATGATCATCATCTGCACGCCCATCTTCCTGCCGCT
GATCAAGGCCTTCGGCATCGATCCGGTGCAGTTCGGCATCATCCTGATCCTGAACGCCGGCATCGGCCTCAACACGCCGC
CCGTGGGCTCGGTGCTGTTCGTGGGCTGCGCGGTGGGCAAGATCTCCATCGGCGAGGCTATGAAGACCATCTGGCCGTTC
TTCGGCGCCAGCATTGTCGTGCTGCTGCTGGTGAGCTACGTGCCCGCCGTGACGCTCTGGCTGCCTTCGCTGTTCCGCTG
A

Upstream 100 bases:

>100_bases
TCTCCTTCGAGCGGCTGCTTCAGGATCTGGTGAAGCCGCTCGTGCCGCCGGTGCCGCTCGGCGCCGAGCATTCCACCGAC
TGAGCGCCGGACCAACGCCC

Downstream 100 bases:

>100_bases
GCGCGCCGCGTCCCGAAATGCCCGGCCGGCGGCCCCGCCGGCCCGTCTTTGGCGTGCCTTGCGGCCGCCCCTTTTCCCGA
AAGGTTTTCATCATGATGAT

Product: C4-dicarboxylate large membrane transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MAMTILFGVFTALLLLGTPVAFCLGLASIATVLYLDLPPMVVFQQINSNMNAFAMLAIPFFIFAGDLMMRGGIADRLIGM
AASMFGHLRGGLGQVNVVASFLFGGVSGSAVADASAIGGIMIPQMAKHGYSRDFAVNVTVNAAIIALLVPPSHNMIIYSL
AAGGTISIADLFTAGILPGILLAAALMITAYIVARNRGYPSGIFPGWYGVLRAVVVAAPGIILIAIIFGGVRSGIFTATE
SSCIAVIYSLLITLLVYRELNWDAFVHATLGAVRTTAMVLLVIGTAGAFGWLMAFLQVPAATIELMQSISSNKYVILLLI
NILLLVLGTFMDMAPMIIICTPIFLPLIKAFGIDPVQFGIILILNAGIGLNTPPVGSVLFVGCAVGKISIGEAMKTIWPF
FGASIVVLLLVSYVPAVTLWLPSLFR

Sequences:

>Translated_426_residues
MAMTILFGVFTALLLLGTPVAFCLGLASIATVLYLDLPPMVVFQQINSNMNAFAMLAIPFFIFAGDLMMRGGIADRLIGM
AASMFGHLRGGLGQVNVVASFLFGGVSGSAVADASAIGGIMIPQMAKHGYSRDFAVNVTVNAAIIALLVPPSHNMIIYSL
AAGGTISIADLFTAGILPGILLAAALMITAYIVARNRGYPSGIFPGWYGVLRAVVVAAPGIILIAIIFGGVRSGIFTATE
SSCIAVIYSLLITLLVYRELNWDAFVHATLGAVRTTAMVLLVIGTAGAFGWLMAFLQVPAATIELMQSISSNKYVILLLI
NILLLVLGTFMDMAPMIIICTPIFLPLIKAFGIDPVQFGIILILNAGIGLNTPPVGSVLFVGCAVGKISIGEAMKTIWPF
FGASIVVLLLVSYVPAVTLWLPSLFR
>Mature_425_residues
AMTILFGVFTALLLLGTPVAFCLGLASIATVLYLDLPPMVVFQQINSNMNAFAMLAIPFFIFAGDLMMRGGIADRLIGMA
ASMFGHLRGGLGQVNVVASFLFGGVSGSAVADASAIGGIMIPQMAKHGYSRDFAVNVTVNAAIIALLVPPSHNMIIYSLA
AGGTISIADLFTAGILPGILLAAALMITAYIVARNRGYPSGIFPGWYGVLRAVVVAAPGIILIAIIFGGVRSGIFTATES
SCIAVIYSLLITLLVYRELNWDAFVHATLGAVRTTAMVLLVIGTAGAFGWLMAFLQVPAATIELMQSISSNKYVILLLIN
ILLLVLGTFMDMAPMIIICTPIFLPLIKAFGIDPVQFGIILILNAGIGLNTPPVGSVLFVGCAVGKISIGEAMKTIWPFF
GASIVVLLLVSYVPAVTLWLPSLFR

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=400, Percent_Identity=34.25, Blast_Score=221, Evalue=9e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 44766; Mature: 44635

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMTILFGVFTALLLLGTPVAFCLGLASIATVLYLDLPPMVVFQQINSNMNAFAMLAIPF
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHH
FIFAGDLMMRGGIADRLIGMAASMFGHLRGGLGQVNVVASFLFGGVSGSAVADASAIGGI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCH
MIPQMAKHGYSRDFAVNVTVNAAIIALLVPPSHNMIIYSLAAGGTISIADLFTAGILPGI
HHHHHHHCCCCCCEEEEEEEEEEEEEEEECCCCCEEEEEECCCCEEHHHHHHHHHHHHHH
LLAAALMITAYIVARNRGYPSGIFPGWYGVLRAVVVAAPGIILIAIIFGGVRSGIFTATE
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEECCC
SSCIAVIYSLLITLLVYRELNWDAFVHATLGAVRTTAMVLLVIGTAGAFGWLMAFLQVPA
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
ATIELMQSISSNKYVILLLINILLLVLGTFMDMAPMIIICTPIFLPLIKAFGIDPVQFGI
HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCE
ILILNAGIGLNTPPVGSVLFVGCAVGKISIGEAMKTIWPFFGASIVVLLLVSYVPAVTLW
EEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPSLFR
HHHHCC
>Mature Secondary Structure 
AMTILFGVFTALLLLGTPVAFCLGLASIATVLYLDLPPMVVFQQINSNMNAFAMLAIPF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHH
FIFAGDLMMRGGIADRLIGMAASMFGHLRGGLGQVNVVASFLFGGVSGSAVADASAIGGI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCH
MIPQMAKHGYSRDFAVNVTVNAAIIALLVPPSHNMIIYSLAAGGTISIADLFTAGILPGI
HHHHHHHCCCCCCEEEEEEEEEEEEEEEECCCCCEEEEEECCCCEEHHHHHHHHHHHHHH
LLAAALMITAYIVARNRGYPSGIFPGWYGVLRAVVVAAPGIILIAIIFGGVRSGIFTATE
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEECCC
SSCIAVIYSLLITLLVYRELNWDAFVHATLGAVRTTAMVLLVIGTAGAFGWLMAFLQVPA
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
ATIELMQSISSNKYVILLLINILLLVLGTFMDMAPMIIICTPIFLPLIKAFGIDPVQFGI
HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCE
ILILNAGIGLNTPPVGSVLFVGCAVGKISIGEAMKTIWPFFGASIVVLLLVSYVPAVTLW
EEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPSLFR
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]