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The map label for this gene is yiaM [C]

Identifier: 158424961

GI number: 158424961

Start: 3864072

End: 3864638

Strand: Reverse

Name: yiaM [C]

Synonym: AZC_3337

Alternate gene names: 158424961

Gene position: 3864638-3864072 (Counterclockwise)

Preceding gene: 158424962

Following gene: 158424960

Centisome position: 71.97

GC content: 64.9

Gene sequence:

>567_bases
ATGACCGATCAGTCCTTGCGAGGGTCCGCCACCATGGGTGCCATACCCGCCCTTCAGATCCTCCACCGCTTTGTGCGCGG
CCTCTCGCGCTTTGCCCTCTACATTTCCGGCGTCGGCCTCATCGTGATGACGGCGGCGGTGTTCTGGCAGGTGGTGGGGC
GCTATGTGCTCAACGATTCCCCCAGCTGGACCGAGCCTTTCTCCCTGCTGCTGATGAGCTGGTTCATCCTGCTCGGAGCC
GCCGTTGGCGTGCGCGAGGGGGATCATCTCGGCTTCGAGATCGGACTGCACTACGCCTCGCCCGCCGTGCGCCGGCTGAT
GGAACTCACGACCCACGTTCTCATTACGGCTTTCGGCGCGGCCATGGCCTATTATGGCTGGGATCTCGCCATGGAGACGT
GGTCCGCCAAGATGGCGGGGATCGACCTGCCGCAAGGCGTCGACTATCTGCCGCTCGCAGGTGGCGGTGCGCTGATCACC
CTCTTCTCCTTCGAGCGGCTGCTTCAGGATCTGGTGAAGCCGCTCGTGCCGCCGGTGCCGCTCGGCGCCGAGCATTCCAC
CGACTGA

Upstream 100 bases:

>100_bases
GGTCGCGCGCATCAAGGCGACCGCCTGACGGCACAGCGCGGGCGGCCCAAGACGCCGCCCGCTTCGGCTGCCGGCCTGAG
GCCGGAGCGGAGATGAAGCC

Downstream 100 bases:

>100_bases
GCGCCGGACCAACGCCCATGGCCATGACCATCCTTTTCGGCGTCTTCACGGCGCTGCTCCTGCTCGGCACGCCGGTGGCC
TTCTGCCTCGGCCTCGCCTC

Product: C4-dicarboxylate transport small permease component

Products: NA

Alternate protein names: C4-Dicarboxylate Transporter Small Subunit; TRAP-Type C4-Dicarboxylate Transport System; Dicarboxylate Transporter Membrane Protein; C4-Dicarboxylate Transport System Small Permease; C4-Dicarboxylate ABC Transporter Permease Component; TRAP Transporter Small Permease Protein DctQ; TRAP Family C4-Dicarboxylate Transmembrane Transporter; TRAP Transporter Small Transmembrane Protein; Dicarboxylate Transport System Small Permease Component; C4-Dicarboxylate Transport Small Permease Component; TRAP Dicarboxylate Transporter Subunit DctM; TRAP Dicarboxylate Transporter DctQ Subunit; TRAP Transporter DctQ-Like Membrane Protein; ABC Transporter Membrane Spanning Protein

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MTDQSLRGSATMGAIPALQILHRFVRGLSRFALYISGVGLIVMTAAVFWQVVGRYVLNDSPSWTEPFSLLLMSWFILLGA
AVGVREGDHLGFEIGLHYASPAVRRLMELTTHVLITAFGAAMAYYGWDLAMETWSAKMAGIDLPQGVDYLPLAGGGALIT
LFSFERLLQDLVKPLVPPVPLGAEHSTD

Sequences:

>Translated_188_residues
MTDQSLRGSATMGAIPALQILHRFVRGLSRFALYISGVGLIVMTAAVFWQVVGRYVLNDSPSWTEPFSLLLMSWFILLGA
AVGVREGDHLGFEIGLHYASPAVRRLMELTTHVLITAFGAAMAYYGWDLAMETWSAKMAGIDLPQGVDYLPLAGGGALIT
LFSFERLLQDLVKPLVPPVPLGAEHSTD
>Mature_187_residues
TDQSLRGSATMGAIPALQILHRFVRGLSRFALYISGVGLIVMTAAVFWQVVGRYVLNDSPSWTEPFSLLLMSWFILLGAA
VGVREGDHLGFEIGLHYASPAVRRLMELTTHVLITAFGAAMAYYGWDLAMETWSAKMAGIDLPQGVDYLPLAGGGALITL
FSFERLLQDLVKPLVPPVPLGAEHSTD

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20436; Mature: 20305

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQSLRGSATMGAIPALQILHRFVRGLSRFALYISGVGLIVMTAAVFWQVVGRYVLNDS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSWTEPFSLLLMSWFILLGAAVGVREGDHLGFEIGLHYASPAVRRLMELTTHVLITAFGA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHH
AMAYYGWDLAMETWSAKMAGIDLPQGVDYLPLAGGGALITLFSFERLLQDLVKPLVPPVP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCC
LGAEHSTD
CCCCCCCC
>Mature Secondary Structure 
TDQSLRGSATMGAIPALQILHRFVRGLSRFALYISGVGLIVMTAAVFWQVVGRYVLNDS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSWTEPFSLLLMSWFILLGAAVGVREGDHLGFEIGLHYASPAVRRLMELTTHVLITAFGA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHH
AMAYYGWDLAMETWSAKMAGIDLPQGVDYLPLAGGGALITLFSFERLLQDLVKPLVPPVP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCC
LGAEHSTD
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA