Click here to switch to the map view.

The map label for this gene is hlyD [C]

Identifier: 158424911

GI number: 158424911

Start: 3796074

End: 3797195

Strand: Reverse

Name: hlyD [C]

Synonym: AZC_3287

Alternate gene names: 158424911

Gene position: 3797195-3796074 (Counterclockwise)

Preceding gene: 158424912

Following gene: 158424910

Centisome position: 70.71

GC content: 65.24

Gene sequence:

>1122_bases
ATGAAGAAGCGGATGATCATGATGCTGATCGCCGTCGGCCTCGTCTTCGGAGCCCTCTATGGCTTCCAGATGTTCAAGGC
CACGATGATCAAGCAGGCACTGGCCTCTCTGCGCGATCCCCCGCAGACGGTCGCCACCATGGAGGCCGCGCTTTCGCCGT
GGCAGACCAGCATCAAGGCGGTCGGCAGCGTGCGGGCGGAGGCCGGTGCGGACCTCGCGCTGGAAAGCTCTGGCACCGTC
TCGGAACTGAACTTCAAGTCCGGCGACGAGGTGCAGGAGGGGCAGGTGCTCCTGAAGCTGCGCGACGACGAGGAGCGGGC
GAACCTCGAGGCCCTCAAGGCGACCGCCGACGTCAGCGCCATCATCCTCAATCGCGACAAGGAACAGCTCAAGATCCACG
CGGTGAGCCAGGCGACCGTGGATAGCGACACGGCGAACCTCAAGAAGGCGCTGGCGCAGGTGACCGAGCAGCAGGCGGTG
GTGGACAAGAAGACGCTGAAGGCGCCCTTCTCCGGCCGCCTAGGCATCCGCGCGGTGGATCTCGGCCAGTATGTCAGCGC
CGGCACGACCATTGTGACCCTCCAGTCGCTCAACCCCATCTTCGTGGACTTCTATCTGCCGCAGCAGGCGCTGGCCGACA
TCAAGACCGGCCAGGCCGTCAAGGCCACCGTGGACACCTATCCCGGCCAGAGCTTCGAGGGGACGATCACGGCGGTGAGC
CCGAAGGTGGACACCTCCTCCCGCAACGTGCAGGTGCGGGCGGAGTTCAAGAATGACGACAAGCGCCTGTTTCCGGGCAT
GTTCGCGACCGTGGAGGTTTCCGTCGGGAAGCCCTCCGATCTCGTGACGGTCCCGCAGACGGCGATCACCGCGAACCCCT
ACGGCGACATCGCCTTCGTGGTGGAGAAGAAGGAAGGCTCGTCGACCGGCCTCTCGGTCAAGCAGGTGTTCGTGAAGACG
GGTGAAACCCGCGGCGATCAGATCGCCGTGACCTCCGGCCTCGCGGCGGGCGACCAGATCGTCGTGGCGGGGCAGATGAA
GCTGCACAACGGCTCGCAGGTCACCGTCAACAACGCCGTCCTGCCGACGAATACGCCCTCTCCCTCCATCACCGACCGCT
GA

Upstream 100 bases:

>100_bases
ACGCGGGCTATTTCCAGGACCACTGAGGCCGCCGCCGGCTCGATGCCGGCGTCCGACCCTTGCGACATGACGGCCCCCGA
GCGGCCAGGAGAAGCAATCC

Downstream 100 bases:

>100_bases
GCGGAGGCGCGCATGTCGTCCTTCACCGATATCTTCATCCGCCGGCCGGTGCTCGCGATCGTCGTCAGCCTGATGATCCT
GGTGCTGGGCCTGCGGGCCA

Product: secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKKRMIMMLIAVGLVFGALYGFQMFKATMIKQALASLRDPPQTVATMEAALSPWQTSIKAVGSVRAEAGADLALESSGTV
SELNFKSGDEVQEGQVLLKLRDDEERANLEALKATADVSAIILNRDKEQLKIHAVSQATVDSDTANLKKALAQVTEQQAV
VDKKTLKAPFSGRLGIRAVDLGQYVSAGTTIVTLQSLNPIFVDFYLPQQALADIKTGQAVKATVDTYPGQSFEGTITAVS
PKVDTSSRNVQVRAEFKNDDKRLFPGMFATVEVSVGKPSDLVTVPQTAITANPYGDIAFVVEKKEGSSTGLSVKQVFVKT
GETRGDQIAVTSGLAAGDQIVVAGQMKLHNGSQVTVNNAVLPTNTPSPSITDR

Sequences:

>Translated_373_residues
MKKRMIMMLIAVGLVFGALYGFQMFKATMIKQALASLRDPPQTVATMEAALSPWQTSIKAVGSVRAEAGADLALESSGTV
SELNFKSGDEVQEGQVLLKLRDDEERANLEALKATADVSAIILNRDKEQLKIHAVSQATVDSDTANLKKALAQVTEQQAV
VDKKTLKAPFSGRLGIRAVDLGQYVSAGTTIVTLQSLNPIFVDFYLPQQALADIKTGQAVKATVDTYPGQSFEGTITAVS
PKVDTSSRNVQVRAEFKNDDKRLFPGMFATVEVSVGKPSDLVTVPQTAITANPYGDIAFVVEKKEGSSTGLSVKQVFVKT
GETRGDQIAVTSGLAAGDQIVVAGQMKLHNGSQVTVNNAVLPTNTPSPSITDR
>Mature_373_residues
MKKRMIMMLIAVGLVFGALYGFQMFKATMIKQALASLRDPPQTVATMEAALSPWQTSIKAVGSVRAEAGADLALESSGTV
SELNFKSGDEVQEGQVLLKLRDDEERANLEALKATADVSAIILNRDKEQLKIHAVSQATVDSDTANLKKALAQVTEQQAV
VDKKTLKAPFSGRLGIRAVDLGQYVSAGTTIVTLQSLNPIFVDFYLPQQALADIKTGQAVKATVDTYPGQSFEGTITAVS
PKVDTSSRNVQVRAEFKNDDKRLFPGMFATVEVSVGKPSDLVTVPQTAITANPYGDIAFVVEKKEGSSTGLSVKQVFVKT
GETRGDQIAVTSGLAAGDQIVVAGQMKLHNGSQVTVNNAVLPTNTPSPSITDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789929, Length=329, Percent_Identity=29.483282674772, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI87082036, Length=356, Percent_Identity=25.8426966292135, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1786668, Length=331, Percent_Identity=28.7009063444109, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1789665, Length=391, Percent_Identity=26.0869565217391, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 39731; Mature: 39731

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRMIMMLIAVGLVFGALYGFQMFKATMIKQALASLRDPPQTVATMEAALSPWQTSIKA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHH
VGSVRAEAGADLALESSGTVSELNFKSGDEVQEGQVLLKLRDDEERANLEALKATADVSA
HHHHHHCCCCCEEEECCCCEEEECCCCCCCCCCCEEEEEEECCCHHCCHHHHHHHCCEEE
IILNRDKEQLKIHAVSQATVDSDTANLKKALAQVTEQQAVVDKKTLKAPFSGRLGIRAVD
EEECCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
LGQYVSAGTTIVTLQSLNPIFVDFYLPQQALADIKTGQAVKATVDTYPGQSFEGTITAVS
CCHHHCCCCEEEEEECCCCEEEEEECCHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEC
PKVDTSSRNVQVRAEFKNDDKRLFPGMFATVEVSVGKPSDLVTVPQTAITANPYGDIAFV
CCCCCCCCCEEEEEEECCCCCEECCCEEEEEEEECCCCCCEEECCCCEEECCCCCCEEEE
VEKKEGSSTGLSVKQVFVKTGETRGDQIAVTSGLAAGDQIVVAGQMKLHNGSQVTVNNAV
EEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCEEEECCEE
LPTNTPSPSITDR
ECCCCCCCCCCCC
>Mature Secondary Structure
MKKRMIMMLIAVGLVFGALYGFQMFKATMIKQALASLRDPPQTVATMEAALSPWQTSIKA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHH
VGSVRAEAGADLALESSGTVSELNFKSGDEVQEGQVLLKLRDDEERANLEALKATADVSA
HHHHHHCCCCCEEEECCCCEEEECCCCCCCCCCCEEEEEEECCCHHCCHHHHHHHCCEEE
IILNRDKEQLKIHAVSQATVDSDTANLKKALAQVTEQQAVVDKKTLKAPFSGRLGIRAVD
EEECCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
LGQYVSAGTTIVTLQSLNPIFVDFYLPQQALADIKTGQAVKATVDTYPGQSFEGTITAVS
CCHHHCCCCEEEEEECCCCEEEEEECCHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEC
PKVDTSSRNVQVRAEFKNDDKRLFPGMFATVEVSVGKPSDLVTVPQTAITANPYGDIAFV
CCCCCCCCCEEEEEEECCCCCEECCCEEEEEEEECCCCCCEEECCCCEEECCCCCCEEEE
VEKKEGSSTGLSVKQVFVKTGETRGDQIAVTSGLAAGDQIVVAGQMKLHNGSQVTVNNAV
EEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCEEEECCEE
LPTNTPSPSITDR
ECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]