Click here to switch to the map view.

The map label for this gene is yecS [H]

Identifier: 158424906

GI number: 158424906

Start: 3789167

End: 3789820

Strand: Reverse

Name: yecS [H]

Synonym: AZC_3282

Alternate gene names: 158424906

Gene position: 3789820-3789167 (Counterclockwise)

Preceding gene: 158424907

Following gene: 158424905

Centisome position: 70.58

GC content: 63.46

Gene sequence:

>654_bases
ATGCCAACCTTTACCCTGACTCACTTCGAGTTTCTGTGCTGGGCCGCGCTGTGGACGGTCGGCCTCTCGGCCATCGCCTT
CGTGGGCGGCGGCATCGTCGGCTTCCTTGTGGCGCTGGCGCGGGTCTCTCCCAGCCCCGTCGTGCGCGGCATCGCCATCG
GCTACATCCAGATCGTGCAGGGCACGCCCCTCCTGATCCTGCTGTTCCTGTTCTACTTCGGGATCGCCATCGTCGGCTTC
AAGGAAGTGCCGGCCATCCTCTCGGCGGGCCTCGGCCTCACTATCTATGCCTCGGGCTTCCTTGCGGAAATCTGGCGCGG
TTGCATCGAGAGCGTGCCCAAGACGCAGTGGGAGGCGGCTGAATGCCTGTCGCTCAGCCGCTGGCAGCGCATGACCAAGG
TGGTGCTGCCGCAGGCCATGCGCATCGCCACTGCACCCACCGTGGGCTTCCTGGTGCAGATCGTGAAGAACACGTCGCTG
GCCTCCGTGGTGGGCTTCATCGAGCTGTCTCAGGCGGGCAAGCTCGTCAACAACTCCATCTTCGAGCCGTTCACCATCTT
CATCGTGGTGGCCAGCATCTATTTCGTCCTCTGCTATCCGCTCTCGACCTGGAGCCGCAGCCTGGAAAGGAAGCTCAATG
TCGGCCGTCGTTAG

Upstream 100 bases:

>100_bases
CTGGCGCTGTCCTTCGTGGTGCGCCTCGCCTTCTGGCTGTTCGGTCTTGTGGTGTTCGTGCGGCGCCGCAAGCTCGGCAC
GGCGCTCTGAGGGGAATGGG

Downstream 100 bases:

>100_bases
TCTTTCGAACGTCCATAAGAGCTTCGGCGCGGTCAAGGTTCTGGATGGCGTGTCCTTTGAGGTGGGGCGCGGCGAGGTGG
CGGCGGTCATCGGCCAGTCC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MPTFTLTHFEFLCWAALWTVGLSAIAFVGGGIVGFLVALARVSPSPVVRGIAIGYIQIVQGTPLLILLFLFYFGIAIVGF
KEVPAILSAGLGLTIYASGFLAEIWRGCIESVPKTQWEAAECLSLSRWQRMTKVVLPQAMRIATAPTVGFLVQIVKNTSL
ASVVGFIELSQAGKLVNNSIFEPFTIFIVVASIYFVLCYPLSTWSRSLERKLNVGRR

Sequences:

>Translated_217_residues
MPTFTLTHFEFLCWAALWTVGLSAIAFVGGGIVGFLVALARVSPSPVVRGIAIGYIQIVQGTPLLILLFLFYFGIAIVGF
KEVPAILSAGLGLTIYASGFLAEIWRGCIESVPKTQWEAAECLSLSRWQRMTKVVLPQAMRIATAPTVGFLVQIVKNTSL
ASVVGFIELSQAGKLVNNSIFEPFTIFIVVASIYFVLCYPLSTWSRSLERKLNVGRR
>Mature_216_residues
PTFTLTHFEFLCWAALWTVGLSAIAFVGGGIVGFLVALARVSPSPVVRGIAIGYIQIVQGTPLLILLFLFYFGIAIVGFK
EVPAILSAGLGLTIYASGFLAEIWRGCIESVPKTQWEAAECLSLSRWQRMTKVVLPQAMRIATAPTVGFLVQIVKNTSLA
SVVGFIELSQAGKLVNNSIFEPFTIFIVVASIYFVLCYPLSTWSRSLERKLNVGRR

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=212, Percent_Identity=36.3207547169811, Blast_Score=134, Evalue=3e-33,
Organism=Escherichia coli, GI87082239, Length=222, Percent_Identity=28.8288288288288, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=28.3720930232558, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1788645, Length=204, Percent_Identity=27.9411764705882, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1788646, Length=214, Percent_Identity=28.5046728971963, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI48994930, Length=141, Percent_Identity=29.7872340425532, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786874, Length=182, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1787086, Length=183, Percent_Identity=27.3224043715847, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1787087, Length=215, Percent_Identity=25.1162790697674, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1786873, Length=200, Percent_Identity=24, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23709; Mature: 23577

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTFTLTHFEFLCWAALWTVGLSAIAFVGGGIVGFLVALARVSPSPVVRGIAIGYIQIVQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GTPLLILLFLFYFGIAIVGFKEVPAILSAGLGLTIYASGFLAEIWRGCIESVPKTQWEAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ECLSLSRWQRMTKVVLPQAMRIATAPTVGFLVQIVKNTSLASVVGFIELSQAGKLVNNSI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
FEPFTIFIVVASIYFVLCYPLSTWSRSLERKLNVGRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PTFTLTHFEFLCWAALWTVGLSAIAFVGGGIVGFLVALARVSPSPVVRGIAIGYIQIVQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GTPLLILLFLFYFGIAIVGFKEVPAILSAGLGLTIYASGFLAEIWRGCIESVPKTQWEAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ECLSLSRWQRMTKVVLPQAMRIATAPTVGFLVQIVKNTSLASVVGFIELSQAGKLVNNSI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
FEPFTIFIVVASIYFVLCYPLSTWSRSLERKLNVGRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]