Click here to switch to the map view.

The map label for this gene is occM [H]

Identifier: 158424907

GI number: 158424907

Start: 3789831

End: 3790514

Strand: Reverse

Name: occM [H]

Synonym: AZC_3283

Alternate gene names: 158424907

Gene position: 3790514-3789831 (Counterclockwise)

Preceding gene: 158424908

Following gene: 158424906

Centisome position: 70.59

GC content: 64.04

Gene sequence:

>684_bases
ATGACCTATCAGTTCGACTTCGCGGTTCTTCTGCCCTTCTGGCGCGAGTTCGCCATGGGCGTGTGGCTCACGCTGCAACT
GTCCCTGATATCGACGGTGCTGGGCTTCATTCTCGGCACCCTCTGCGCCATCGGCCGGGCGGATGGCCCGCCGTGGGTGA
AGTTCCTCGTGGCGACCTATGTGGAGATCATCCGCAACACGCCGCTGCTGGTGCAGGTGTTCATCGTCTATTTCGGCATC
GCCACGCTGGGCATCCACGTCTCCGCCAACCTCGCGGCGGTGCTGGCGCTGGTGGTGAATGTGGGTGCCTATACCAGCGA
GATCGTGCGGGCGGGCCTTGAGTCCATCCACAAGTCGCAGCTGGAAGCCGCAGAGTGCCTCGGCCTCAGCCGGCCGCAGA
CCTATTGGCACGTGATCGTGCGCCCCGCCATCGAGCGGGTTTATCCGGCGCTCACCAGCCAGTACGTGCTGCTGATGCTG
GCCTCGTCCATCACCTCGCAGATCTCTGCCGAGGAACTGACGGCGGTGGCCAACCGCATCCAGTCCGACACCTTCCGCAG
CTTCGAGACCTATATCGTCGTCGGCGTGCTCTATCTGGCGCTGTCCTTCGTGGTGCGCCTCGCCTTCTGGCTGTTCGGTC
TTGTGGTGTTCGTGCGGCGCCGCAAGCTCGGCACGGCGCTCTGA

Upstream 100 bases:

>100_bases
TGAGCTGGTGGGGAGAGGCGGGGGGCGTGCCGGCCACCCCGCTGCTGGACGGCGTGATGGCCAGGCGTGCGTCGCCGCCG
AAAACCGCGCGGAGCGGCGC

Downstream 100 bases:

>100_bases
GGGGAATGGGATGCCAACCTTTACCCTGACTCACTTCGAGTTTCTGTGCTGGGCCGCGCTGTGGACGGTCGGCCTCTCGG
CCATCGCCTTCGTGGGCGGC

Product: amino acid ABC transporter permease

Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTYQFDFAVLLPFWREFAMGVWLTLQLSLISTVLGFILGTLCAIGRADGPPWVKFLVATYVEIIRNTPLLVQVFIVYFGI
ATLGIHVSANLAAVLALVVNVGAYTSEIVRAGLESIHKSQLEAAECLGLSRPQTYWHVIVRPAIERVYPALTSQYVLLML
ASSITSQISAEELTAVANRIQSDTFRSFETYIVVGVLYLALSFVVRLAFWLFGLVVFVRRRKLGTAL

Sequences:

>Translated_227_residues
MTYQFDFAVLLPFWREFAMGVWLTLQLSLISTVLGFILGTLCAIGRADGPPWVKFLVATYVEIIRNTPLLVQVFIVYFGI
ATLGIHVSANLAAVLALVVNVGAYTSEIVRAGLESIHKSQLEAAECLGLSRPQTYWHVIVRPAIERVYPALTSQYVLLML
ASSITSQISAEELTAVANRIQSDTFRSFETYIVVGVLYLALSFVVRLAFWLFGLVVFVRRRKLGTAL
>Mature_226_residues
TYQFDFAVLLPFWREFAMGVWLTLQLSLISTVLGFILGTLCAIGRADGPPWVKFLVATYVEIIRNTPLLVQVFIVYFGIA
TLGIHVSANLAAVLALVVNVGAYTSEIVRAGLESIHKSQLEAAECLGLSRPQTYWHVIVRPAIERVYPALTSQYVLLMLA
SSITSQISAEELTAVANRIQSDTFRSFETYIVVGVLYLALSFVVRLAFWLFGLVVFVRRRKLGTAL

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787030, Length=210, Percent_Identity=34.7619047619048, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1788226, Length=180, Percent_Identity=33.8888888888889, Blast_Score=100, Evalue=5e-23,
Organism=Escherichia coli, GI1788645, Length=196, Percent_Identity=30.1020408163265, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1786874, Length=201, Percent_Identity=27.363184079602, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1786873, Length=227, Percent_Identity=26.431718061674, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788646, Length=213, Percent_Identity=23.4741784037559, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI48994930, Length=117, Percent_Identity=34.1880341880342, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787087, Length=206, Percent_Identity=23.3009708737864, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI87082239, Length=192, Percent_Identity=27.6041666666667, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25222; Mature: 25091

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYQFDFAVLLPFWREFAMGVWLTLQLSLISTVLGFILGTLCAIGRADGPPWVKFLVATY
CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VEIIRNTPLLVQVFIVYFGIATLGIHVSANLAAVLALVVNVGAYTSEIVRAGLESIHKSQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEAAECLGLSRPQTYWHVIVRPAIERVYPALTSQYVLLMLASSITSQISAEELTAVANRI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSDTFRSFETYIVVGVLYLALSFVVRLAFWLFGLVVFVRRRKLGTAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TYQFDFAVLLPFWREFAMGVWLTLQLSLISTVLGFILGTLCAIGRADGPPWVKFLVATY
CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VEIIRNTPLLVQVFIVYFGIATLGIHVSANLAAVLALVVNVGAYTSEIVRAGLESIHKSQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEAAECLGLSRPQTYWHVIVRPAIERVYPALTSQYVLLMLASSITSQISAEELTAVANRI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSDTFRSFETYIVVGVLYLALSFVVRLAFWLFGLVVFVRRRKLGTAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamine [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655707; 1732218 [H]