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The map label for this gene is cycY [H]

Identifier: 158424900

GI number: 158424900

Start: 3782825

End: 3783211

Strand: Reverse

Name: cycY [H]

Synonym: AZC_3276

Alternate gene names: 158424900

Gene position: 3783211-3782825 (Counterclockwise)

Preceding gene: 158424901

Following gene: 158424899

Centisome position: 70.45

GC content: 67.96

Gene sequence:

>387_bases
ATGGCCTTTCGGCAGACGCCCCTGATCATGTGCCTTGCCCTGACACTGCTGGGAACGGGAGGCGCGGCCCATGCGCAGGA
TGCTGCCGCCGGCGAACGCCTGTTCCGCGCGCGCTGTGCGTCGTGCCACGCCGTCGAATCCGGCCAGAACCGGATCGGCC
CGAGCCTGAGCGGGGTTATCGGCCGCAAGGCGGGCAGCCTCGAAGGCGCCCGCTATTCGCAAGGTATGAGGGCACTCGAT
GTGACCTGGGATGCGGCGCAGTTGGACACGTATCTCGCTAATCCGCGCGCGATGGTGCCCGGCACGACCATGACGGTTTC
GGTGACGAGCGCCGCGGACCGCGCCGCGATCACCGGCTACCTGCAGACCCTTTCGCAGCCGAAGTGA

Upstream 100 bases:

>100_bases
CACCCGTGGGCTCGGCCTTGCGTGATCGCCGGGGTCACCGGCCGATCACGCATTCGTTCATCCCTGATGCAGCCCCATCG
ACGTAACCTTAGGAGACGGA

Downstream 100 bases:

>100_bases
GCCTGGAACAGCATAACCAGACCGGGAGCAGACGATGGCCAAGCTGAACGTCAATGGTCGGGATTTCGAGATCGACGTGG
AGGAGGATACGCCCCTGCTC

Product: c-type cytochrome

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MAFRQTPLIMCLALTLLGTGGAAHAQDAAAGERLFRARCASCHAVESGQNRIGPSLSGVIGRKAGSLEGARYSQGMRALD
VTWDAAQLDTYLANPRAMVPGTTMTVSVTSAADRAAITGYLQTLSQPK

Sequences:

>Translated_128_residues
MAFRQTPLIMCLALTLLGTGGAAHAQDAAAGERLFRARCASCHAVESGQNRIGPSLSGVIGRKAGSLEGARYSQGMRALD
VTWDAAQLDTYLANPRAMVPGTTMTVSVTSAADRAAITGYLQTLSQPK
>Mature_127_residues
AFRQTPLIMCLALTLLGTGGAAHAQDAAAGERLFRARCASCHAVESGQNRIGPSLSGVIGRKAGSLEGARYSQGMRALDV
TWDAAQLDTYLANPRAMVPGTTMTVSVTSAADRAAITGYLQTLSQPK

Specific function: Electron transfer pathways that operates during photosynthesis [H]

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI11128019, Length=98, Percent_Identity=34.6938775510204, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17566554, Length=106, Percent_Identity=37.7358490566038, Blast_Score=89, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17539604, Length=102, Percent_Identity=36.2745098039216, Blast_Score=81, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6322508, Length=100, Percent_Identity=37, Blast_Score=82, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6320796, Length=96, Percent_Identity=35.4166666666667, Blast_Score=82, Evalue=3e-17,
Organism=Drosophila melanogaster, GI17137228, Length=104, Percent_Identity=37.5, Blast_Score=87, Evalue=4e-18,
Organism=Drosophila melanogaster, GI17137204, Length=99, Percent_Identity=37.3737373737374, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13339; Mature: 13208

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRQTPLIMCLALTLLGTGGAAHAQDAAAGERLFRARCASCHAVESGQNRIGPSLSGVI
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
GRKAGSLEGARYSQGMRALDVTWDAAQLDTYLANPRAMVPGTTMTVSVTSAADRAAITGY
HCCCCCCCCHHHHCCCEEEECCCCHHHHHHHHCCCCEECCCCEEEEEECCCCCHHHHHHH
LQTLSQPK
HHHHCCCC
>Mature Secondary Structure 
AFRQTPLIMCLALTLLGTGGAAHAQDAAAGERLFRARCASCHAVESGQNRIGPSLSGVI
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
GRKAGSLEGARYSQGMRALDVTWDAAQLDTYLANPRAMVPGTTMTVSVTSAADRAAITGY
HCCCCCCCCHHHHCCCEEEECCCCHHHHHHHHCCCCEECCCCEEEEEECCCCCHHHHHHH
LQTLSQPK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8385603 [H]