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The map label for this gene is ybaQ [C]

Identifier: 158424881

GI number: 158424881

Start: 3758069

End: 3758392

Strand: Direct

Name: ybaQ [C]

Synonym: AZC_3257

Alternate gene names: 158424881

Gene position: 3758069-3758392 (Clockwise)

Preceding gene: 158424875

Following gene: 158424882

Centisome position: 69.99

GC content: 61.42

Gene sequence:

>324_bases
ATGACCGATGAGCATGACCTTCGGCTGAAGACGCCCGCCCATCCTGGCGGTTTCGTCAAGCATGAGGTGCTGCAACCGCT
CGGCTTGTCCGTGACCGAGGCGGCAGAGGCGTTGGGGGTTACGCGACCGGCCTTGTCGGCGCTTCTGAACGAGCGTGCGC
ACCTGTCGCCGGAAATGGCGATCCGGATTGAAAAGGCCTTCGGCGTACCGATGGAGACGCTGATGCGCATGCAGAACAGC
TACGACATTGCGCAGGCCCGCAGGCGGGAAGCGGAGATCAAGGTCGAGCGATACACAGGAATGAATACGAAGGGTCGAGC
ATGA

Upstream 100 bases:

>100_bases
AGGTGCCTGGCACCGCCATGTTCCGTAAAGCGTCACTTTACAGGAAACGTTACGTCCGATACGCTGCATCCGAATCGATG
AACATTCAACGGGCAGCGCG

Downstream 100 bases:

>100_bases
CGGAGCTGAGTTTCAAGGGCAAAGAGTTTGTCTATAACCACCATCTGGCGGTGCCCTTCCGTCCGCTGGTGCCCGATGAA
AGCAAGGGCATTGGCCCGGT

Product: plasmid maintenance system antidote protein

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTDEHDLRLKTPAHPGGFVKHEVLQPLGLSVTEAAEALGVTRPALSALLNERAHLSPEMAIRIEKAFGVPMETLMRMQNS
YDIAQARRREAEIKVERYTGMNTKGRA

Sequences:

>Translated_107_residues
MTDEHDLRLKTPAHPGGFVKHEVLQPLGLSVTEAAEALGVTRPALSALLNERAHLSPEMAIRIEKAFGVPMETLMRMQNS
YDIAQARRREAEIKVERYTGMNTKGRA
>Mature_106_residues
TDEHDLRLKTPAHPGGFVKHEVLQPLGLSVTEAAEALGVTRPALSALLNERAHLSPEMAIRIEKAFGVPMETLMRMQNSY
DIAQARRREAEIKVERYTGMNTKGRA

Specific function: Unknown

COG id: COG3093

COG function: function code R; Plasmid maintenance system antidote protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013430
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 11924; Mature: 11793

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEHDLRLKTPAHPGGFVKHEVLQPLGLSVTEAAEALGVTRPALSALLNERAHLSPEMA
CCCCCCCEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH
IRIEKAFGVPMETLMRMQNSYDIAQARRREAEIKVERYTGMNTKGRA
EEEHHHCCCCHHHHHHHHCCCCHHHHHHHHHHEEHHCCCCCCCCCCC
>Mature Secondary Structure 
TDEHDLRLKTPAHPGGFVKHEVLQPLGLSVTEAAEALGVTRPALSALLNERAHLSPEMA
CCCCCCEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH
IRIEKAFGVPMETLMRMQNSYDIAQARRREAEIKVERYTGMNTKGRA
EEEHHHCCCCHHHHHHHHCCCCHHHHHHHHHHEEHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7937823 [H]