| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424877
Identifier: 158424877
GI number: 158424877
Start: 3754277
End: 3754918
Strand: Reverse
Name: 158424877
Synonym: AZC_3253
Alternate gene names: NA
Gene position: 3754918-3754277 (Counterclockwise)
Preceding gene: 158424878
Following gene: 158424876
Centisome position: 69.93
GC content: 64.64
Gene sequence:
>642_bases GTGGCGCTTTTTCGCCCGCCACGGGCATACGCGCAAAAAAAGACCGGCCATGCGAGCGAGCAGGACCGCCCCGACATCCT GAGCGCGCGTGAAGCCTGGTTCGATGGTCAGCTCGACCTCGATCCGGAAACGCTGATCTTCGTCGATGAGACAGGTGCCA GTACGAAGATGGCACGCCGCTATGGACGCGCTCCACGCGGCGAACGGCTGCGCATGGCTGTACCGCACGGACACTGGATG ACGACCACGTTCGTCGGGGCTTTGCGGCTCTCGGGCATGACCGCACCGCTCGTCATCGACGGACCGATGACCGGGGCGTG GTTCGAGGCCTGGGTTGCCCGGGTACTCGCTCCGACGCTGAAACGGGGCGACGTTGTGATCCTGGACAACCTGCCCGCCC ACAAAAGCGTCGTGGCGCGGGAGGCGATCGAGGCAAGGGGCGCCCGGCTGCTCTTCCTTCCGCCTTACTCGCCCGACTTC AATCCGATCGAAAACGCCTTCGCCAAGCTGAAAGCACTCCTGCGCAAAGCCGCTGCACGCACCGTCGACGATCTGTCCCG CGCCATCGGTGCCGCCATCGACACCTTCACGCCCGCCGAATGCGCCAACTACTTCGCCGCTGCCGGATACGATGCATATT GA
Upstream 100 bases:
>100_bases CGCGCATCTGGGCGCTGTACGAGGCGGCTCCGGACATCACTCTTGCCGAGCTGCGCGAGGGGCTGGCCGCCGAAGGGATC GCGGTTGCAGTATCGACCCT
Downstream 100 bases:
>100_bases TCGGAATCTGCTCTAGCGCCCAACATCCGAATTGCCGCCGATAGCCACATAAATTCCGCTGAAAACCGCTGGCTGCCGCA AAATCATGGATGTCTGAACA
Product: transposase of insertion sequence
Products: NA
Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; LOW QUALITY PROTEIN Transposase; Degenerate Transposase; Transposase Family Protein; Transposase IS; ISSoc4 Transposase OrfAB; Transposase And Inactivated Derivative; Transposase Fragment
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MALFRPPRAYAQKKTGHASEQDRPDILSAREAWFDGQLDLDPETLIFVDETGASTKMARRYGRAPRGERLRMAVPHGHWM TTTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVLAPTLKRGDVVILDNLPAHKSVVAREAIEARGARLLFLPPYSPDF NPIENAFAKLKALLRKAAARTVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY
Sequences:
>Translated_213_residues MALFRPPRAYAQKKTGHASEQDRPDILSAREAWFDGQLDLDPETLIFVDETGASTKMARRYGRAPRGERLRMAVPHGHWM TTTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVLAPTLKRGDVVILDNLPAHKSVVAREAIEARGARLLFLPPYSPDF NPIENAFAKLKALLRKAAARTVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY >Mature_212_residues ALFRPPRAYAQKKTGHASEQDRPDILSAREAWFDGQLDLDPETLIFVDETGASTKMARRYGRAPRGERLRMAVPHGHWMT TTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVLAPTLKRGDVVILDNLPAHKSVVAREAIEARGARLLFLPPYSPDFN PIENAFAKLKALLRKAAARTVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23386; Mature: 23255
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFRPPRAYAQKKTGHASEQDRPDILSAREAWFDGQLDLDPETLIFVDETGASTKMARR CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHH YGRAPRGERLRMAVPHGHWMTTTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVLAPTL HCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHH KRGDVVILDNLPAHKSVVAREAIEARGARLLFLPPYSPDFNPIENAFAKLKALLRKAAAR CCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH TVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure ALFRPPRAYAQKKTGHASEQDRPDILSAREAWFDGQLDLDPETLIFVDETGASTKMARR CCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHH YGRAPRGERLRMAVPHGHWMTTTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVLAPTL HCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHH KRGDVVILDNLPAHKSVVAREAIEARGARLLFLPPYSPDFNPIENAFAKLKALLRKAAAR CCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH TVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA