Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is 158424877

Identifier: 158424877

GI number: 158424877

Start: 3754277

End: 3754918

Strand: Reverse

Name: 158424877

Synonym: AZC_3253

Alternate gene names: NA

Gene position: 3754918-3754277 (Counterclockwise)

Preceding gene: 158424878

Following gene: 158424876

Centisome position: 69.93

GC content: 64.64

Gene sequence:

>642_bases
GTGGCGCTTTTTCGCCCGCCACGGGCATACGCGCAAAAAAAGACCGGCCATGCGAGCGAGCAGGACCGCCCCGACATCCT
GAGCGCGCGTGAAGCCTGGTTCGATGGTCAGCTCGACCTCGATCCGGAAACGCTGATCTTCGTCGATGAGACAGGTGCCA
GTACGAAGATGGCACGCCGCTATGGACGCGCTCCACGCGGCGAACGGCTGCGCATGGCTGTACCGCACGGACACTGGATG
ACGACCACGTTCGTCGGGGCTTTGCGGCTCTCGGGCATGACCGCACCGCTCGTCATCGACGGACCGATGACCGGGGCGTG
GTTCGAGGCCTGGGTTGCCCGGGTACTCGCTCCGACGCTGAAACGGGGCGACGTTGTGATCCTGGACAACCTGCCCGCCC
ACAAAAGCGTCGTGGCGCGGGAGGCGATCGAGGCAAGGGGCGCCCGGCTGCTCTTCCTTCCGCCTTACTCGCCCGACTTC
AATCCGATCGAAAACGCCTTCGCCAAGCTGAAAGCACTCCTGCGCAAAGCCGCTGCACGCACCGTCGACGATCTGTCCCG
CGCCATCGGTGCCGCCATCGACACCTTCACGCCCGCCGAATGCGCCAACTACTTCGCCGCTGCCGGATACGATGCATATT
GA

Upstream 100 bases:

>100_bases
CGCGCATCTGGGCGCTGTACGAGGCGGCTCCGGACATCACTCTTGCCGAGCTGCGCGAGGGGCTGGCCGCCGAAGGGATC
GCGGTTGCAGTATCGACCCT

Downstream 100 bases:

>100_bases
TCGGAATCTGCTCTAGCGCCCAACATCCGAATTGCCGCCGATAGCCACATAAATTCCGCTGAAAACCGCTGGCTGCCGCA
AAATCATGGATGTCTGAACA

Product: transposase of insertion sequence

Products: NA

Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; LOW QUALITY PROTEIN Transposase; Degenerate Transposase; Transposase Family Protein; Transposase IS; ISSoc4 Transposase OrfAB; Transposase And Inactivated Derivative; Transposase Fragment

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MALFRPPRAYAQKKTGHASEQDRPDILSAREAWFDGQLDLDPETLIFVDETGASTKMARRYGRAPRGERLRMAVPHGHWM
TTTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVLAPTLKRGDVVILDNLPAHKSVVAREAIEARGARLLFLPPYSPDF
NPIENAFAKLKALLRKAAARTVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY

Sequences:

>Translated_213_residues
MALFRPPRAYAQKKTGHASEQDRPDILSAREAWFDGQLDLDPETLIFVDETGASTKMARRYGRAPRGERLRMAVPHGHWM
TTTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVLAPTLKRGDVVILDNLPAHKSVVAREAIEARGARLLFLPPYSPDF
NPIENAFAKLKALLRKAAARTVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY
>Mature_212_residues
ALFRPPRAYAQKKTGHASEQDRPDILSAREAWFDGQLDLDPETLIFVDETGASTKMARRYGRAPRGERLRMAVPHGHWMT
TTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVLAPTLKRGDVVILDNLPAHKSVVAREAIEARGARLLFLPPYSPDFN
PIENAFAKLKALLRKAAARTVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23386; Mature: 23255

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFRPPRAYAQKKTGHASEQDRPDILSAREAWFDGQLDLDPETLIFVDETGASTKMARR
CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHH
YGRAPRGERLRMAVPHGHWMTTTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVLAPTL
HCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
KRGDVVILDNLPAHKSVVAREAIEARGARLLFLPPYSPDFNPIENAFAKLKALLRKAAAR
CCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
TVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ALFRPPRAYAQKKTGHASEQDRPDILSAREAWFDGQLDLDPETLIFVDETGASTKMARR
CCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHH
YGRAPRGERLRMAVPHGHWMTTTFVGALRLSGMTAPLVIDGPMTGAWFEAWVARVLAPTL
HCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
KRGDVVILDNLPAHKSVVAREAIEARGARLLFLPPYSPDFNPIENAFAKLKALLRKAAAR
CCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
TVDDLSRAIGAAIDTFTPAECANYFAAAGYDAY
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA