| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424878
Identifier: 158424878
GI number: 158424878
Start: 3755327
End: 3755671
Strand: Reverse
Name: 158424878
Synonym: AZC_3254
Alternate gene names: NA
Gene position: 3755671-3755327 (Counterclockwise)
Preceding gene: 158424879
Following gene: 158424877
Centisome position: 69.94
GC content: 62.9
Gene sequence:
>345_bases ATGTTGCTCACCGAAGGGCAGATGAGCGACTACAAGGGAGCGGCCCTCATGTTCGAGGCGATGCCACCCGCTCCGGTGCT GCTTGCCGATCGCGGCTATGACGCCGACTGGTTCCGTCACGCGCTCGCCGCACGCGGCACCGCCGCCTGCATCCCGTCAC GCAAGGGGCGCAAATTGCCGATCCCCCATGATGCAACCCTCTACCGGCGTCGCCACAAAATCGAAAACATGTTCGGCCGC CTCAAGGACTGGCGGCGCATCCACACCCGCTATGACCGATGCGCACATGCCTTCATGTCCGCCATCGCACTCGCCGCGTC CGTCATCTTCTGGATCAATCAATGA
Upstream 100 bases:
>100_bases TGCTCAAAAAGGGGCTTTTCCCCGATGTATCGGGCGCACCAAAGGAGGGCTGAACTCCAAGCTGCACGCCGTCTGCGATG ATCGTGGTCGTCCCCGCGTC
Downstream 100 bases:
>100_bases GTCCTGAGCCTAGAGCAAAATCCGATCAGCGTGAATCGCTGAGGGATTCCCAAAGGGAGTGAAGTCTGATTCATGCTCGT TTCCGGCGAGGGGAGGCCGG
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS4 Family; LOW QUALITY PROTEIN Transposase; ISSod6 Transposase; Transposase And Inactivated Derivatives-Like Protein; Insertion Sequence Transposase Protein; Transposase Domain Protein; ISCc1 Transposase OrfB; Transposase OrfA IS5 Family Element; IS4 Insertion Sequence Transposase Protein; Transposase Of Unassigned Insertion Sequence; ISSpo7 Transposase; ISRin4 Transposase OrfB; Transposase-Like Protein; Insertion Sequence/Transposase-Related Protein; ISSod6 Transposase IS; IS66 Orf2 Family Protein; Transposase Of; IS5 Family Transposase; Response Regulator Receiver Protein; Transposase IS5 Family Protein
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MLLTEGQMSDYKGAALMFEAMPPAPVLLADRGYDADWFRHALAARGTAACIPSRKGRKLPIPHDATLYRRRHKIENMFGR LKDWRRIHTRYDRCAHAFMSAIALAASVIFWINQ
Sequences:
>Translated_114_residues MLLTEGQMSDYKGAALMFEAMPPAPVLLADRGYDADWFRHALAARGTAACIPSRKGRKLPIPHDATLYRRRHKIENMFGR LKDWRRIHTRYDRCAHAFMSAIALAASVIFWINQ >Mature_114_residues MLLTEGQMSDYKGAALMFEAMPPAPVLLADRGYDADWFRHALAARGTAACIPSRKGRKLPIPHDATLYRRRHKIENMFGR LKDWRRIHTRYDRCAHAFMSAIALAASVIFWINQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13072; Mature: 13072
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTEGQMSDYKGAALMFEAMPPAPVLLADRGYDADWFRHALAARGTAACIPSRKGRKLP CCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC IPHDATLYRRRHKIENMFGRLKDWRRIHTRYDRCAHAFMSAIALAASVIFWINQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLLTEGQMSDYKGAALMFEAMPPAPVLLADRGYDADWFRHALAARGTAACIPSRKGRKLP CCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC IPHDATLYRRRHKIENMFGRLKDWRRIHTRYDRCAHAFMSAIALAASVIFWINQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA