| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is iucB [H]
Identifier: 158424869
GI number: 158424869
Start: 3742084
End: 3743415
Strand: Reverse
Name: iucB [H]
Synonym: AZC_3245
Alternate gene names: 158424869
Gene position: 3743415-3742084 (Counterclockwise)
Preceding gene: 158424876
Following gene: 158424868
Centisome position: 69.71
GC content: 67.64
Gene sequence:
>1332_bases ATGGCGTCCCTCCCGGTCCCGCACGACCGTGCGCGTCTCGTCCTTGCCTGGCTTGTCGTGCCTCATCGTGCTCTCCCCGC TGCGGCCCTGTTGGCTAGGACGAACGAGGCCCCGCCGCATTTAGGCGCGGGATCCAAAAAAACGCCGGCTCGATCCGCGG GGGCTAAATCGTCGCGGGGCTCGTACGTCCTGTCCAAGAGGTCGCATCAGGCGCGGCCGTCGGGGACAGGTGATTGCATG ACCATAGCGGAACTCGTCACATTGACCGGCCAGCGTCGGCCTTTCGTCGCTCTTGCGGCCACGGACCGTCCGGTGGAGGT GCATGTCGGAGCGCAGTCCGTGCGGATTGCGGCGGGCGATGCCTCGGTCTCCCTTGGATGGCAGCGGCAGGGGGGCGGCG CATTGCTCACGGGCGCGCTCCTGGATCCACGCGCCGACATGCTGCTGCTGGCCGCGTGTGAAGCCCTTTTCGGCAGCTTC CCGGAACTCACCCATGTGGCTCTGGCGCCGGACCTCGCGCCGGCGGCCGTGGCGGGCCTCATCACCCACGGTCCGGCGCA ACTCGTGGATGGCCTGCCACGCATCGAGCCGGACCTGCTCTGGCAGATGTCCGCGCTATGGCTGCCCGGATCGGGCGGCG TATTCCCCCAGCGTCTGGTGACGGAGAACGGCATCCGCCATCCGCGGCGCCCTCCCATGCGGGACGGGCTGCTCTACGCC CGCTCCATCCCCTGGCTCGGTCAGTCGATCACCTTCGAAACCGCAGATCCGGAGCGGCATCTTCCAGCCTTCCATCGCTG GATGAATGATCCGCGGGTTGCGGAGATCTGGGAGGAAACCGGCGATCTCGCGCAGCACCGGGCCTATCTGGAGGAGCGCC GCGCCGATCCCCACGTCGTTCCGGTGATCGGCAGTTTCGGCGGCGTGCCGTTCGGCTATTTCGAGCTCTACTGGGCCAGG GAAAACCGCCTCGGGCCGCATTACGAGGCTCAGGACTACGACCGGGGCTGGCACGTTCTCGTGGGCGAGGAGGCGTTTCG CGGCAAGGCCTACATCAGCGCCTGGCTGCCCTCGCTGATGCATTTCATGTTCCTCGACGATCCGCGCACCCAGCGCATCG TCGGCGAGCCGCGGGCGACACATGCGCAGCAGATCCGCAATCTCGACCGCTCCGGCTTCGCCAAGGTCAAGCATGTGGAT TTTTCCCACAAGCGGGCCCTGCTGGTGATGCTGCTGCGGGAGCGCTTCTTCGGCGACCGCCTCTGGCAGCCGGATTTCGA TGCCACCGCCCAGCCGGTGCTGCCGGTGGCGGCCCAGGCCGTACCGGCATGA
Upstream 100 bases:
>100_bases CCCATGTGGCGTCCACGTAGGCGAGGCAATGCGCAGCGCTTCCGGTGACGGCGACGGCCTGCCATCCGTTGGGAACGGGC CGCCAGACGGGCCAGAGGGC
Downstream 100 bases:
>100_bases GCGGAACGGGCGAGGATGGCGTGCGCTTCGCCGCGCCCCTCGATCTTGCCGATCCGCGCCTTGAGCGTCTCATCGTCCGC CTCGCCGTTCCTTCGGTGGC
Product: siderophore biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MASLPVPHDRARLVLAWLVVPHRALPAAALLARTNEAPPHLGAGSKKTPARSAGAKSSRGSYVLSKRSHQARPSGTGDCM TIAELVTLTGQRRPFVALAATDRPVEVHVGAQSVRIAAGDASVSLGWQRQGGGALLTGALLDPRADMLLLAACEALFGSF PELTHVALAPDLAPAAVAGLITHGPAQLVDGLPRIEPDLLWQMSALWLPGSGGVFPQRLVTENGIRHPRRPPMRDGLLYA RSIPWLGQSITFETADPERHLPAFHRWMNDPRVAEIWEETGDLAQHRAYLEERRADPHVVPVIGSFGGVPFGYFELYWAR ENRLGPHYEAQDYDRGWHVLVGEEAFRGKAYISAWLPSLMHFMFLDDPRTQRIVGEPRATHAQQIRNLDRSGFAKVKHVD FSHKRALLVMLLRERFFGDRLWQPDFDATAQPVLPVAAQAVPA
Sequences:
>Translated_443_residues MASLPVPHDRARLVLAWLVVPHRALPAAALLARTNEAPPHLGAGSKKTPARSAGAKSSRGSYVLSKRSHQARPSGTGDCM TIAELVTLTGQRRPFVALAATDRPVEVHVGAQSVRIAAGDASVSLGWQRQGGGALLTGALLDPRADMLLLAACEALFGSF PELTHVALAPDLAPAAVAGLITHGPAQLVDGLPRIEPDLLWQMSALWLPGSGGVFPQRLVTENGIRHPRRPPMRDGLLYA RSIPWLGQSITFETADPERHLPAFHRWMNDPRVAEIWEETGDLAQHRAYLEERRADPHVVPVIGSFGGVPFGYFELYWAR ENRLGPHYEAQDYDRGWHVLVGEEAFRGKAYISAWLPSLMHFMFLDDPRTQRIVGEPRATHAQQIRNLDRSGFAKVKHVD FSHKRALLVMLLRERFFGDRLWQPDFDATAQPVLPVAAQAVPA >Mature_442_residues ASLPVPHDRARLVLAWLVVPHRALPAAALLARTNEAPPHLGAGSKKTPARSAGAKSSRGSYVLSKRSHQARPSGTGDCMT IAELVTLTGQRRPFVALAATDRPVEVHVGAQSVRIAAGDASVSLGWQRQGGGALLTGALLDPRADMLLLAACEALFGSFP ELTHVALAPDLAPAAVAGLITHGPAQLVDGLPRIEPDLLWQMSALWLPGSGGVFPQRLVTENGIRHPRRPPMRDGLLYAR SIPWLGQSITFETADPERHLPAFHRWMNDPRVAEIWEETGDLAQHRAYLEERRADPHVVPVIGSFGGVPFGYFELYWARE NRLGPHYEAQDYDRGWHVLVGEEAFRGKAYISAWLPSLMHFMFLDDPRTQRIVGEPRATHAQQIRNLDRSGFAKVKHVDF SHKRALLVMLLRERFFGDRLWQPDFDATAQPVLPVAAQAVPA
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR019432 [H]
Pfam domain/function: PF10331 AlcB [H]
EC number: NA
Molecular weight: Translated: 48716; Mature: 48585
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLPVPHDRARLVLAWLVVPHRALPAAALLARTNEAPPHLGAGSKKTPARSAGAKSSRG CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SYVLSKRSHQARPSGTGDCMTIAELVTLTGQRRPFVALAATDRPVEVHVGAQSVRIAAGD CEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCEEEEEECC ASVSLGWQRQGGGALLTGALLDPRADMLLLAACEALFGSFPELTHVALAPDLAPAAVAGL CEEEECEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHEEHCCCCCHHHHHHHH ITHGPAQLVDGLPRIEPDLLWQMSALWLPGSGGVFPQRLVTENGIRHPRRPPMRDGLLYA HHCCHHHHHCCCCCCCHHHHHHHHHEEECCCCCCCHHHHHHHCCCCCCCCCCHHHCEEEE RSIPWLGQSITFETADPERHLPAFHRWMNDPRVAEIWEETGDLAQHRAYLEERRADPHVV CCCCCCCCCEEEECCCCHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE PVIGSFGGVPFGYFELYWARENRLGPHYEAQDYDRGWHVLVGEEAFRGKAYISAWLPSLM EEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHCCHHHHHHHHHHHH HFMFLDDPRTQRIVGEPRATHAQQIRNLDRSGFAKVKHVDFSHKRALLVMLLRERFFGDR HHHHCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCC LWQPDFDATAQPVLPVAAQAVPA CCCCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure ASLPVPHDRARLVLAWLVVPHRALPAAALLARTNEAPPHLGAGSKKTPARSAGAKSSRG CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SYVLSKRSHQARPSGTGDCMTIAELVTLTGQRRPFVALAATDRPVEVHVGAQSVRIAAGD CEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCEEEEEECC ASVSLGWQRQGGGALLTGALLDPRADMLLLAACEALFGSFPELTHVALAPDLAPAAVAGL CEEEECEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHEEHCCCCCHHHHHHHH ITHGPAQLVDGLPRIEPDLLWQMSALWLPGSGGVFPQRLVTENGIRHPRRPPMRDGLLYA HHCCHHHHHCCCCCCCHHHHHHHHHEEECCCCCCCHHHHHHHCCCCCCCCCCHHHCEEEE RSIPWLGQSITFETADPERHLPAFHRWMNDPRVAEIWEETGDLAQHRAYLEERRADPHVV CCCCCCCCCEEEECCCCHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE PVIGSFGGVPFGYFELYWARENRLGPHYEAQDYDRGWHVLVGEEAFRGKAYISAWLPSLM EEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHCCHHHHHHHHHHHH HFMFLDDPRTQRIVGEPRATHAQQIRNLDRSGFAKVKHVDFSHKRALLVMLLRERFFGDR HHHHCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCC LWQPDFDATAQPVLPVAAQAVPA CCCCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8003107 [H]