| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424834
Identifier: 158424834
GI number: 158424834
Start: 3674485
End: 3675735
Strand: Reverse
Name: 158424834
Synonym: AZC_3210
Alternate gene names: NA
Gene position: 3675735-3674485 (Counterclockwise)
Preceding gene: 158424835
Following gene: 158424833
Centisome position: 68.45
GC content: 63.15
Gene sequence:
>1251_bases GTGGATAGACGATCAACAAAAAGACACTCAGGGAGAAGCCACATGAAGGGTATCGTTCTCGCGGCGGCGCTCGGCGTCGT CATGGGCGGCATGTCAGGGCCGGCAAGCGCCCAGATGTCGGATGGAAAGATCAAGATCGGCGTCTTGTCCGATCTCACGG GCGTCTATTCGGACATCAATGGCGAGGGTTCGGCCACGGCGGCGCGCCTCGCGGCCGAAGAATTCGGGAACGCCATCAAT GGCACGCCCGTGGAGATCGTGGTTGCAGATCACCAGAACAAGGCCGATGTCGCTGCGAGCATCGCACGCAAGTGGATCGA TGCCGAGCAGGTGGATGTCATTGCCGATGTGCCCAATTCCGCCGCGGCGCTGGCGGTGCAGGACATTACACGGGAGCGCA AGCGCATCTTCCTGATGTCCGGGCCCGGTGCCGTCGATCTGACCGGCAAGGCGTGCAGCCCTTACGGCTTCATGTGGACC TGGGATACCCACTCCGTCTCCGCCACCACCGCACGGGCGCTGGTCGCCAAGGGCGACAAGAGCTGGTTCTTCGTCACCGC CGATTACGCCTTCGGCCATTCGCTGGAGGATGAGGCGAGCAAGACGGTCAAGGCGCTGGGCGGTACGGTGAAAGGTGGCG TCCGGGTGCCCCTCGCGACCTCCGATTTCTCCTCCTTCCTCGTGCAGGCGCAGGGGTCGGGGGCCAAGGTGGTAGCGCTG GCAAATGCCGGTGGCGATACGATCAATTCGGTGAAGCAGGCGAACGAATTCGGCCTTCCGCAAGGCGGGCAGACGCTCGC CGGCCTGCTGCTGAACATCAACGACATCCATGCCCTCACGCTGCCCGTCGCGCAGGGGCTGATCATGTCCAACTCCTTCT ATTGGGACATGAATGACGAGACCCGCGCCTGGTCCCGCAAGTTCGAAGCCAAGACGGGGCGCAAGCCCTCCATGAACCAG GCGGGCGTGTATTCCGCCGTCCGGCATTATCTCCAGGCCGTGAAGGATGTCGGCACGGACGATGCGGACAAGGTGGCGGA GAAGATGCGCGCCACCCCGGTGAACGACATGATGATGAAGAACGCCGCCATCGGCCGGAACGGCCGTGTGTTCGGCAACA TGTATCTGTTCGAGGTCAAGAAGCCGGCGGAGTCCAAGGGCGCCTGGGACTATCTCAGGCTCGTCGAGACCGTGCCGGGC AAGGACGCCTATATTCCCGAAGCCCAGAGCGGCTGTCCGCTCGTGAGGTGA
Upstream 100 bases:
>100_bases GGCGGCGGTTGTCTTCCTCTGCTCGGAGGCGGCGGCCGGGATCACCGGAACCGTGCTCTCGGTGGACGGAGGCTATACCG CGCGGTGACGGGCGCACGTC
Downstream 100 bases:
>100_bases GGGCCGGACCGGCGCTTCGTCCGATCCACCCGAAAAAGGTCAAGGCACCGCCACGCGCAAAACGGCGGAGTGGCGGGCTT TTCCGCACCTTCGGCCTCGG
Product: branched-chain amino acid ABC transporter periplasmic protein
Products: NA
Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter; Tat Pathway Signal Sequence Domain Protein; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MDRRSTKRHSGRSHMKGIVLAAALGVVMGGMSGPASAQMSDGKIKIGVLSDLTGVYSDINGEGSATAARLAAEEFGNAIN GTPVEIVVADHQNKADVAASIARKWIDAEQVDVIADVPNSAAALAVQDITRERKRIFLMSGPGAVDLTGKACSPYGFMWT WDTHSVSATTARALVAKGDKSWFFVTADYAFGHSLEDEASKTVKALGGTVKGGVRVPLATSDFSSFLVQAQGSGAKVVAL ANAGGDTINSVKQANEFGLPQGGQTLAGLLLNINDIHALTLPVAQGLIMSNSFYWDMNDETRAWSRKFEAKTGRKPSMNQ AGVYSAVRHYLQAVKDVGTDDADKVAEKMRATPVNDMMMKNAAIGRNGRVFGNMYLFEVKKPAESKGAWDYLRLVETVPG KDAYIPEAQSGCPLVR
Sequences:
>Translated_416_residues MDRRSTKRHSGRSHMKGIVLAAALGVVMGGMSGPASAQMSDGKIKIGVLSDLTGVYSDINGEGSATAARLAAEEFGNAIN GTPVEIVVADHQNKADVAASIARKWIDAEQVDVIADVPNSAAALAVQDITRERKRIFLMSGPGAVDLTGKACSPYGFMWT WDTHSVSATTARALVAKGDKSWFFVTADYAFGHSLEDEASKTVKALGGTVKGGVRVPLATSDFSSFLVQAQGSGAKVVAL ANAGGDTINSVKQANEFGLPQGGQTLAGLLLNINDIHALTLPVAQGLIMSNSFYWDMNDETRAWSRKFEAKTGRKPSMNQ AGVYSAVRHYLQAVKDVGTDDADKVAEKMRATPVNDMMMKNAAIGRNGRVFGNMYLFEVKKPAESKGAWDYLRLVETVPG KDAYIPEAQSGCPLVR >Mature_416_residues MDRRSTKRHSGRSHMKGIVLAAALGVVMGGMSGPASAQMSDGKIKIGVLSDLTGVYSDINGEGSATAARLAAEEFGNAIN GTPVEIVVADHQNKADVAASIARKWIDAEQVDVIADVPNSAAALAVQDITRERKRIFLMSGPGAVDLTGKACSPYGFMWT WDTHSVSATTARALVAKGDKSWFFVTADYAFGHSLEDEASKTVKALGGTVKGGVRVPLATSDFSSFLVQAQGSGAKVVAL ANAGGDTINSVKQANEFGLPQGGQTLAGLLLNINDIHALTLPVAQGLIMSNSFYWDMNDETRAWSRKFEAKTGRKPSMNQ AGVYSAVRHYLQAVKDVGTDDADKVAEKMRATPVNDMMMKNAAIGRNGRVFGNMYLFEVKKPAESKGAWDYLRLVETVPG KDAYIPEAQSGCPLVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44236; Mature: 44236
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRRSTKRHSGRSHMKGIVLAAALGVVMGGMSGPASAQMSDGKIKIGVLSDLTGVYSDIN CCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCC GEGSATAARLAAEEFGNAINGTPVEIVVADHQNKADVAASIARKWIDAEQVDVIADVPNS CCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHEEEEEECCCC AAALAVQDITRERKRIFLMSGPGAVDLTGKACSPYGFMWTWDTHSVSATTARALVAKGDK HHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCC SWFFVTADYAFGHSLEDEASKTVKALGGTVKGGVRVPLATSDFSSFLVQAQGSGAKVVAL CEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHEEECCCCEEEEEE ANAGGDTINSVKQANEFGLPQGGQTLAGLLLNINDIHALTLPVAQGLIMSNSFYWDMNDE ECCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHEEHHHHHCCEEECCCEEEECCCC TRAWSRKFEAKTGRKPSMNQAGVYSAVRHYLQAVKDVGTDDADKVAEKMRATPVNDMMMK HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHH NAAIGRNGRVFGNMYLFEVKKPAESKGAWDYLRLVETVPGKDAYIPEAQSGCPLVR HHCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDRRSTKRHSGRSHMKGIVLAAALGVVMGGMSGPASAQMSDGKIKIGVLSDLTGVYSDIN CCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCC GEGSATAARLAAEEFGNAINGTPVEIVVADHQNKADVAASIARKWIDAEQVDVIADVPNS CCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHEEEEEECCCC AAALAVQDITRERKRIFLMSGPGAVDLTGKACSPYGFMWTWDTHSVSATTARALVAKGDK HHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCC SWFFVTADYAFGHSLEDEASKTVKALGGTVKGGVRVPLATSDFSSFLVQAQGSGAKVVAL CEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHEEECCCCEEEEEE ANAGGDTINSVKQANEFGLPQGGQTLAGLLLNINDIHALTLPVAQGLIMSNSFYWDMNDE ECCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHEEHHHHHCCEEECCCEEEECCCC TRAWSRKFEAKTGRKPSMNQAGVYSAVRHYLQAVKDVGTDDADKVAEKMRATPVNDMMMK HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHH NAAIGRNGRVFGNMYLFEVKKPAESKGAWDYLRLVETVPGKDAYIPEAQSGCPLVR HHCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA