| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yjgF [C]
Identifier: 158424809
GI number: 158424809
Start: 3643869
End: 3644267
Strand: Reverse
Name: yjgF [C]
Synonym: AZC_3185
Alternate gene names: 158424809
Gene position: 3644267-3643869 (Counterclockwise)
Preceding gene: 158424810
Following gene: 158424807
Centisome position: 67.87
GC content: 64.91
Gene sequence:
>399_bases ATGATGCACGAGATCCTGCAGCCTGAGGGGTGGGCGAAGCCGATCGGCTACGCCAATGGCGTTCTCGCCCGCGGCCGCCA GATCTGGGTGGGCGGCCAGATCGGCTGGTCCGCGCACCAGGCCTTCGAAAGCGACGACCTCGTGGATCAGGTCCGCCAGA CACTGCTCAATATCGTGGCCGTGCTCGCCGAGGGTGGCGCGGAGCCGCAGCATATCGTCTCGATGACCTGGTACTTCGTG GACAAGCAGGAGTATCTGGCCCGGCTCAAGGAGATTGGTGCGGTCTACCGCGAGGTGCTCGGGCGGCATTACCCTGCCAT GGCCGCCGTACAGGTGGTGGCGCTGATGGAAGATCGCGCCAAGGTCGAGATTCAGGCCACCGCCGTCGTTCCTGAGTGA
Upstream 100 bases:
>100_bases ACCGCCCGGCAGGTGCTGGTTGCAACTTCCCTTGAGAGCCATCGGGCGATCCGTTGGCCTGATGACGTGCGCGCCGGTCT CGCGGCGCATCTGGAGACGA
Downstream 100 bases:
>100_bases GGGCTGGCGGCCCTGAGATTTCACGGAGTTGTGCGACGTGCCGCGCCTCGTTCCCCGAGGCGCGGCATTAGTCGTAGGGA TCGGACGGTTGCGGCCGAGT
Product: endoribonuclease L-PSP
Products: NA
Alternate protein names: Endoribonuclease L-PSP Family Protein; Endoribonuclease; Translation Initiation Inhibitor; Pyrimidine Utilization Protein C; Aerobic 2-Aminobenzoate Metabolism Related Protein; Translational Inhibitor; Endoribonuclease Translation Initiation Inhibitor; Endoribonuclease L-PSP Superfamily
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MMHEILQPEGWAKPIGYANGVLARGRQIWVGGQIGWSAHQAFESDDLVDQVRQTLLNIVAVLAEGGAEPQHIVSMTWYFV DKQEYLARLKEIGAVYREVLGRHYPAMAAVQVVALMEDRAKVEIQATAVVPE
Sequences:
>Translated_132_residues MMHEILQPEGWAKPIGYANGVLARGRQIWVGGQIGWSAHQAFESDDLVDQVRQTLLNIVAVLAEGGAEPQHIVSMTWYFV DKQEYLARLKEIGAVYREVLGRHYPAMAAVQVVALMEDRAKVEIQATAVVPE >Mature_132_residues MMHEILQPEGWAKPIGYANGVLARGRQIWVGGQIGWSAHQAFESDDLVDQVRQTLLNIVAVLAEGGAEPQHIVSMTWYFV DKQEYLARLKEIGAVYREVLGRHYPAMAAVQVVALMEDRAKVEIQATAVVPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14698; Mature: 14698
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHEILQPEGWAKPIGYANGVLARGRQIWVGGQIGWSAHQAFESDDLVDQVRQTLLNIVA CCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHH VLAEGGAEPQHIVSMTWYFVDKQEYLARLKEIGAVYREVLGRHYPAMAAVQVVALMEDRA HHHCCCCCHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC KVEIQATAVVPE EEEEEEEEECCC >Mature Secondary Structure MMHEILQPEGWAKPIGYANGVLARGRQIWVGGQIGWSAHQAFESDDLVDQVRQTLLNIVA CCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHH VLAEGGAEPQHIVSMTWYFVDKQEYLARLKEIGAVYREVLGRHYPAMAAVQVVALMEDRA HHHCCCCCHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC KVEIQATAVVPE EEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA