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The map label for this gene is marR [H]

Identifier: 158424807

GI number: 158424807

Start: 3641089

End: 3641604

Strand: Reverse

Name: marR [H]

Synonym: AZC_3183

Alternate gene names: 158424807

Gene position: 3641604-3641089 (Counterclockwise)

Preceding gene: 158424809

Following gene: 158424806

Centisome position: 67.82

GC content: 68.02

Gene sequence:

>516_bases
ATGACTGAGCCCATGCCCGAGGACTTTGAGGCGCTGGTGCGCGACGAGCCGGCCGGCTCGAAGATGGAGCTGCGCCTCTG
GCTGCGGCTGCTCTCGGTGTCGAACCTCGTCAGCGCCGAGATCCGCCGCCGGCTGCGAGCGGAGTTCGACGTGACATTGC
CCCGCTTCGACGTCCTTGCGCAGTTGAACCGCGAGCCGGACGGGCTTCGCCTGGGCGACCTGTCCCGGCGGATGATGGTC
TCCAACGGCAACATCACCGGCCTCATCGACCGTCTCGTGGAAGAGGGGCTGGTGGTGCGCAAGGTGGACCCCAACGACCG
CCGCGCCGCGACCGTCCGGCTGAGCCGCGCCGGTGCAACCATGTTCCGCATCATGGCGAGCGCCCACGAGGCCTGGATTC
ATGAACTGTTCGGCGATTTGTCCAAGCGGCAGGTTGCGGGGCTGCTGGACGAACTCGAGACCCTGAAACGCTCGGTCGCC
GGGGTCGTCCACGCCACGGAGGCGGACCGCTCCTGA

Upstream 100 bases:

>100_bases
CACGCAGCGGTGCTCCGCACTGGCGTCCGCGGACGGGTTTGCAGGGCGTTTGCCCATAATTTCAGGTATGAAAAGTTAGC
AGCAGTGGTATCGAGCCGTC

Downstream 100 bases:

>100_bases
GGACAGGGCGGAACAGCGGCCCGCAGCGGATCGTCAAGGGGAGCGCCATCGGCTAAGGTGCCGCATGTTTCTCAGCCTGA
TGTTCGCTCCGTGACCCCTG

Product: regulatory protein

Products: NA

Alternate protein names: Benzoate anaerobic degradation regulator [H]

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTEPMPEDFEALVRDEPAGSKMELRLWLRLLSVSNLVSAEIRRRLRAEFDVTLPRFDVLAQLNREPDGLRLGDLSRRMMV
SNGNITGLIDRLVEEGLVVRKVDPNDRRAATVRLSRAGATMFRIMASAHEAWIHELFGDLSKRQVAGLLDELETLKRSVA
GVVHATEADRS

Sequences:

>Translated_171_residues
MTEPMPEDFEALVRDEPAGSKMELRLWLRLLSVSNLVSAEIRRRLRAEFDVTLPRFDVLAQLNREPDGLRLGDLSRRMMV
SNGNITGLIDRLVEEGLVVRKVDPNDRRAATVRLSRAGATMFRIMASAHEAWIHELFGDLSKRQVAGLLDELETLKRSVA
GVVHATEADRS
>Mature_170_residues
TEPMPEDFEALVRDEPAGSKMELRLWLRLLSVSNLVSAEIRRRLRAEFDVTLPRFDVLAQLNREPDGLRLGDLSRRMMVS
NGNITGLIDRLVEEGLVVRKVDPNDRRAATVRLSRAGATMFRIMASAHEAWIHELFGDLSKRQVAGLLDELETLKRSVAG
VVHATEADRS

Specific function: Transcriptional activator of genes for the anaerobic degradation of benzoate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 19275; Mature: 19143

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPMPEDFEALVRDEPAGSKMELRLWLRLLSVSNLVSAEIRRRLRAEFDVTLPRFDVLA
CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
QLNREPDGLRLGDLSRRMMVSNGNITGLIDRLVEEGLVVRKVDPNDRRAATVRLSRAGAT
HHCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCHHHEEEHHHHHHH
MFRIMASAHEAWIHELFGDLSKRQVAGLLDELETLKRSVAGVVHATEADRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TEPMPEDFEALVRDEPAGSKMELRLWLRLLSVSNLVSAEIRRRLRAEFDVTLPRFDVLA
CCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
QLNREPDGLRLGDLSRRMMVSNGNITGLIDRLVEEGLVVRKVDPNDRRAATVRLSRAGAT
HHCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCHHHEEEHHHHHHH
MFRIMASAHEAWIHELFGDLSKRQVAGLLDELETLKRSVAGVVHATEADRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9177244; 10094687 [H]