| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is ssuA [H]
Identifier: 158424784
GI number: 158424784
Start: 3615428
End: 3616396
Strand: Direct
Name: ssuA [H]
Synonym: AZC_3160
Alternate gene names: 158424784
Gene position: 3615428-3616396 (Clockwise)
Preceding gene: 158424783
Following gene: 158424785
Centisome position: 67.33
GC content: 66.46
Gene sequence:
>969_bases ATGTCGCACACGAACAACCCGTTTTCCGTGACGCGCCGGCGCTTCGGGGCGCTGGCCGCCGGCACGCTGGTCGCCGGCTG GAGCGCCGGCGCCCATGCGCAGGAAAAGGTGGTGCGGATCGGCTATCAGAAATACGGCACGCTGATCCTGCTCAAGAACA AGGGCCTGCTGGAAGCCAAGCTGAAGCCGCTCGGCTACGCCGTCCGCTGGGCGGAATTTGCCGCCGGGCCGCAGCTGCTC GAGGCCCTGAACGCGGGGGCCATCGATTTCGGCAACACCGGCGAGGCCCCGCCGATCTTCGCGCAGGCCGCCGGGGCACC ACTCGTCTATGTGGGCTATGAGCCCGCCGCGCCCGAGGGCGAAGCCATCCTCGTGCCCAAGAACAGCCCGCTTAAGACGG TCGCCGATCTCAAGGGCAAGACGGTGGCCCTCAACAAGGGCTCGAACGTCCATTACCTGCTGGTGAAGGCGCTGGAGACG GCGAACGTCTCCTATACGGACATCAAGACCGCCTTCCTCACCCCCGCCGATGCCCGCGCCGCCTTCGAGCGCGGCGCGGT GGACGCCTGGGCCATCTGGGACCCCTTCCAGGCCGCTGCGGAAACGACCATCGAGGCTCGCCAGCTCACCAACGGCACCG GCATCGTCTCCAATTACCAGTTCTATTTCTCCACCCAGAGCTTCGTGGAGAAGGCCCCCGATGTGGTCGATGCGGTGCTC GCGGGCGTCGCGGAAATCGGCGCCTGGGTGAAGGCCAATCCGAAGGCCGCGGCAGCGGAATTCTCGCCGCTCATCGGCAT TCCTGCACCGATACTCGAGATTGCGCTCGCCCGCCAGCAGTATGACGTGAAGCCCATCACCCCCGCGGTGGTGGCTCAGC AGCAGCAGGTGGCGGACGCCTTCTTCAAGCTGGGCCTCATCCCCAAGGAGATCCGCATCTCCGACGCGGTGCGGGCCCTC AAATCATGA
Upstream 100 bases:
>100_bases GCCCCTGCTCTATTGGGCCGGCGCCTATCGCGGCCTCGAAGCGTCGCCAGCCAACGTCTGAAATCCATCCGGTCCGCGTC ACCGCCTCAGGGGTCATGTC
Downstream 100 bases:
>100_bases GCGACGCCGCCATCGAGAGCGCGACGCTGGCCTCGGCCCCCGCCGTCTCCCGGCAGCGGGGCAGCGTGCTGAAGGCCCTC GCCGGCGGCCTGCTGCCCTG
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSHTNNPFSVTRRRFGALAAGTLVAGWSAGAHAQEKVVRIGYQKYGTLILLKNKGLLEAKLKPLGYAVRWAEFAAGPQLL EALNAGAIDFGNTGEAPPIFAQAAGAPLVYVGYEPAAPEGEAILVPKNSPLKTVADLKGKTVALNKGSNVHYLLVKALET ANVSYTDIKTAFLTPADARAAFERGAVDAWAIWDPFQAAAETTIEARQLTNGTGIVSNYQFYFSTQSFVEKAPDVVDAVL AGVAEIGAWVKANPKAAAAEFSPLIGIPAPILEIALARQQYDVKPITPAVVAQQQQVADAFFKLGLIPKEIRISDAVRAL KS
Sequences:
>Translated_322_residues MSHTNNPFSVTRRRFGALAAGTLVAGWSAGAHAQEKVVRIGYQKYGTLILLKNKGLLEAKLKPLGYAVRWAEFAAGPQLL EALNAGAIDFGNTGEAPPIFAQAAGAPLVYVGYEPAAPEGEAILVPKNSPLKTVADLKGKTVALNKGSNVHYLLVKALET ANVSYTDIKTAFLTPADARAAFERGAVDAWAIWDPFQAAAETTIEARQLTNGTGIVSNYQFYFSTQSFVEKAPDVVDAVL AGVAEIGAWVKANPKAAAAEFSPLIGIPAPILEIALARQQYDVKPITPAVVAQQQQVADAFFKLGLIPKEIRISDAVRAL KS >Mature_321_residues SHTNNPFSVTRRRFGALAAGTLVAGWSAGAHAQEKVVRIGYQKYGTLILLKNKGLLEAKLKPLGYAVRWAEFAAGPQLLE ALNAGAIDFGNTGEAPPIFAQAAGAPLVYVGYEPAAPEGEAILVPKNSPLKTVADLKGKTVALNKGSNVHYLLVKALETA NVSYTDIKTAFLTPADARAAFERGAVDAWAIWDPFQAAAETTIEARQLTNGTGIVSNYQFYFSTQSFVEKAPDVVDAVLA GVAEIGAWVKANPKAAAAEFSPLIGIPAPILEIALARQQYDVKPITPAVVAQQQQVADAFFKLGLIPKEIRISDAVRALK S
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081803, Length=303, Percent_Identity=45.2145214521452, Blast_Score=250, Evalue=9e-68, Organism=Escherichia coli, GI87081727, Length=181, Percent_Identity=27.6243093922652, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 34183; Mature: 34052
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTNNPFSVTRRRFGALAAGTLVAGWSAGAHAQEKVVRIGYQKYGTLILLKNKGLLEAK CCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCEEEEEECCCCEEEC LKPLGYAVRWAEFAAGPQLLEALNAGAIDFGNTGEAPPIFAQAAGAPLVYVGYEPAAPEG CCCCCHHHHHHHHHCCHHHHHHHCCCCEECCCCCCCCCCHHHCCCCCEEEECCCCCCCCC EAILVPKNSPLKTVADLKGKTVALNKGSNVHYLLVKALETANVSYTDIKTAFLTPADARA CEEEEECCCCCHHHHHCCCCEEEEECCCCEEEEEEEEHHHCCCCHHEEEEEEECCCHHHH AFERGAVDAWAIWDPFQAAAETTIEARQLTNGTGIVSNYQFYFSTQSFVEKAPDVVDAVL HHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEECEEEEECCHHHHHHCHHHHHHHH AGVAEIGAWVKANPKAAAAEFSPLIGIPAPILEIALARQQYDVKPITPAVVAQQQQVADA HHHHHHCCCEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH FFKLGLIPKEIRISDAVRALKS HHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SHTNNPFSVTRRRFGALAAGTLVAGWSAGAHAQEKVVRIGYQKYGTLILLKNKGLLEAK CCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCEEEEEECCCCEEEC LKPLGYAVRWAEFAAGPQLLEALNAGAIDFGNTGEAPPIFAQAAGAPLVYVGYEPAAPEG CCCCCHHHHHHHHHCCHHHHHHHCCCCEECCCCCCCCCCHHHCCCCCEEEECCCCCCCCC EAILVPKNSPLKTVADLKGKTVALNKGSNVHYLLVKALETANVSYTDIKTAFLTPADARA CEEEEECCCCCHHHHHCCCCEEEEECCCCEEEEEEEEHHHCCCCHHEEEEEEECCCHHHH AFERGAVDAWAIWDPFQAAAETTIEARQLTNGTGIVSNYQFYFSTQSFVEKAPDVVDAVL HHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEECEEEEECCHHHHHHCHHHHHHHH AGVAEIGAWVKANPKAAAAEFSPLIGIPAPILEIALARQQYDVKPITPAVVAQQQQVADA HHHHHHCCCEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH FFKLGLIPKEIRISDAVRALKS HHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10506196; 8905232; 9278503 [H]