Click here to switch to the map view.

The map label for this gene is tsr [H]

Identifier: 158424779

GI number: 158424779

Start: 3609732

End: 3611432

Strand: Direct

Name: tsr [H]

Synonym: AZC_3155

Alternate gene names: 158424779

Gene position: 3609732-3611432 (Clockwise)

Preceding gene: 158424777

Following gene: 158424780

Centisome position: 67.22

GC content: 68.49

Gene sequence:

>1701_bases
ATGGTCAAATACTCCAATCTGCCGATGACTGCGAAGGTCGTGACCCTTCTCGCGGCGCTCGGCGTGACAAGCCTCGCAGG
CGGGCTCTATGCGGCCTCCGGCATGTCGGACATCCAGACGACGTACGTGGACCTCATCAACGGCCACCAGACGGCCATCC
TCCGGGTGGCGCGGGCGGCCCGGTCCGCGCAGACCGTGCGCGCCGAAATCTACCGGGCCATCGTGGCCACCACGGAGTCG
GAGGACCAGAAGGCGAAGGCGGCGCTGGACGGCGGCATCAAGCGCTATGACACCCTGCTGGCCGAAGCGGCGCAGGCCGC
GCCCAGCAAGACCGGCGAGATCCAGCAGATGCGCAATGCGCTGCCGGCGGTCGTCTCGGGCCCCTGCTCGGGCGCCATCA
ATGCCGGCGCCGAACAGGTGACGGTGGAGAGCATCGAGCGCGCCTCGAAGCTCATGTCCACCGTCTGCGACCCGGCCATC
GACCAGATCGTCAACACCACCGTCAGCTTCAATGACGGGCTCATCAAGGAAACCGCCGCCATCAAGGAAGAGACGGCGCG
GCGCACCAGCACCACGATCTGGACCACGCTCGGCTGCATCCTCGGCGCGACGCTGCTCATCATCGCCCTCGCCATCTTCG
TGGTGCGTGGCGGCATCGTGGCCCCGCTGCGCCGCCTCATGGACAAGATGGTGGCCATGGGCGAAGGCAAGCTCGCCGGC
GAGGTGGAAGGCACGGCGCGCAAGGACGAGATCGGCGCCATGGGCCGCACCCTCGAACTCATGCGCGTGCAGCTCGGCGA
GGCGGAAGTCGCCCGGCAGGAGCAGGCCCAGCGGCAGGAAGTCGAGCGCAAGACGCTGGAGCGCCGCGAGCACCTCGCCC
AGGGCTTCGTCGCCCGGATGAAGGATCTCGCCTCTGGCTTTGCCAATTCCTCTCAGGAAGTGGCCGAATCCGCCCGCAAC
CTCTCGGCTGCCGCCGACCAGACCTCGCAGCAGGCCCAGTCGGTCGCCGCGGCGGCGGAGGAAGCCGCCACCAATGTGCA
GACGGTGGCCGCCTCCTCCGAGGAACTCGCCGCCTCGGTGCGCGAGATCAACGGCCAGGTCTCCCATTCGGCGGTCGTCG
CGGAGCGCGCCTACAAGGAGGCGGAATCCTCCAACCAGCGCATCGCGGATCTCGCCAAGGCGGCAGCGGACATCGGCGAC
GTGATCAACCTCATCAAGGGCATTGCCGACCAGACCAACCTGCTGGCGCTCAATGCCACCATCGAGGCGGCGCGCGCCGG
TGAGGCCGGCAAGGGCTTCGCGGTGGTGGCCACGGAGGTGAAGGAACTGGCGTCCCAGACCTCCAAGGCGACCGCCGACA
TCTACACCAAGGTGACGGAGATCCAGACCGCGACCCAGGGCACGGTGGCCTCCATGTCGGAAATCATCCGCGTCATCACC
GAGGTGAAGCAGATCTCCTCCTCCATCGCCGGCGCGGTGGAGCAGCAGGGCGCCGCCACCGGCGAGATCGCGCAGAACTG
CCAGCAGGCCGCCACCGGCACGCAGGATGTGACGAACAACATCAGCGGCGTCGGCCAGGCCGCCCAGACCACCGGCGCGG
CGTCCTCCCAGTTGCTCGCCCTGTCGCAGGGGCTCTCGTCCCAGGCGACGGACCTGCGCAGCGTCGTGGAAGGCTTCGTC
CGCGACCTCAACGCCGCGTGA

Upstream 100 bases:

>100_bases
GAGAACAAAAAGAATACATCCGCTTTGAATACTTAAACGCAGCAGATCAAGTCAATTCGGAGCGGCAGGTCAATAACGCA
ACCCAAGGTGGACGGAAGCG

Downstream 100 bases:

>100_bases
TCCTGATCCGGAGAGGGGCGCCGCCCGGCGCCCCTCTTTACATTCTCTTCGGCCCTTCGCCCTGCGCTTTGACGGAAACA
GCCCCATGACCATCAAGACG

Product: methyl-accepting chemotaxis sensory transducer precursor

Products: NA

Alternate protein names: MCP-I; Serine chemoreceptor protein [H]

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MVKYSNLPMTAKVVTLLAALGVTSLAGGLYAASGMSDIQTTYVDLINGHQTAILRVARAARSAQTVRAEIYRAIVATTES
EDQKAKAALDGGIKRYDTLLAEAAQAAPSKTGEIQQMRNALPAVVSGPCSGAINAGAEQVTVESIERASKLMSTVCDPAI
DQIVNTTVSFNDGLIKETAAIKEETARRTSTTIWTTLGCILGATLLIIALAIFVVRGGIVAPLRRLMDKMVAMGEGKLAG
EVEGTARKDEIGAMGRTLELMRVQLGEAEVARQEQAQRQEVERKTLERREHLAQGFVARMKDLASGFANSSQEVAESARN
LSAAADQTSQQAQSVAAAAEEAATNVQTVAASSEELAASVREINGQVSHSAVVAERAYKEAESSNQRIADLAKAAADIGD
VINLIKGIADQTNLLALNATIEAARAGEAGKGFAVVATEVKELASQTSKATADIYTKVTEIQTATQGTVASMSEIIRVIT
EVKQISSSIAGAVEQQGAATGEIAQNCQQAATGTQDVTNNISGVGQAAQTTGAASSQLLALSQGLSSQATDLRSVVEGFV
RDLNAA

Sequences:

>Translated_566_residues
MVKYSNLPMTAKVVTLLAALGVTSLAGGLYAASGMSDIQTTYVDLINGHQTAILRVARAARSAQTVRAEIYRAIVATTES
EDQKAKAALDGGIKRYDTLLAEAAQAAPSKTGEIQQMRNALPAVVSGPCSGAINAGAEQVTVESIERASKLMSTVCDPAI
DQIVNTTVSFNDGLIKETAAIKEETARRTSTTIWTTLGCILGATLLIIALAIFVVRGGIVAPLRRLMDKMVAMGEGKLAG
EVEGTARKDEIGAMGRTLELMRVQLGEAEVARQEQAQRQEVERKTLERREHLAQGFVARMKDLASGFANSSQEVAESARN
LSAAADQTSQQAQSVAAAAEEAATNVQTVAASSEELAASVREINGQVSHSAVVAERAYKEAESSNQRIADLAKAAADIGD
VINLIKGIADQTNLLALNATIEAARAGEAGKGFAVVATEVKELASQTSKATADIYTKVTEIQTATQGTVASMSEIIRVIT
EVKQISSSIAGAVEQQGAATGEIAQNCQQAATGTQDVTNNISGVGQAAQTTGAASSQLLALSQGLSSQATDLRSVVEGFV
RDLNAA
>Mature_566_residues
MVKYSNLPMTAKVVTLLAALGVTSLAGGLYAASGMSDIQTTYVDLINGHQTAILRVARAARSAQTVRAEIYRAIVATTES
EDQKAKAALDGGIKRYDTLLAEAAQAAPSKTGEIQQMRNALPAVVSGPCSGAINAGAEQVTVESIERASKLMSTVCDPAI
DQIVNTTVSFNDGLIKETAAIKEETARRTSTTIWTTLGCILGATLLIIALAIFVVRGGIVAPLRRLMDKMVAMGEGKLAG
EVEGTARKDEIGAMGRTLELMRVQLGEAEVARQEQAQRQEVERKTLERREHLAQGFVARMKDLASGFANSSQEVAESARN
LSAAADQTSQQAQSVAAAAEEAATNVQTVAASSEELAASVREINGQVSHSAVVAERAYKEAESSNQRIADLAKAAADIGD
VINLIKGIADQTNLLALNATIEAARAGEAGKGFAVVATEVKELASQTSKATADIYTKVTEIQTATQGTVASMSEIIRVIT
EVKQISSSIAGAVEQQGAATGEIAQNCQQAATGTQDVTNNISGVGQAAQTTGAASSQLLALSQGLSSQATDLRSVVEGFV
RDLNAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=374, Percent_Identity=29.144385026738, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1788194, Length=234, Percent_Identity=35.042735042735, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1788195, Length=226, Percent_Identity=30.0884955752212, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1787690, Length=332, Percent_Identity=28.9156626506024, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1789453, Length=295, Percent_Identity=28.135593220339, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58935; Mature: 58935

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKYSNLPMTAKVVTLLAALGVTSLAGGLYAASGMSDIQTTYVDLINGHQTAILRVARAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH
RSAQTVRAEIYRAIVATTESEDQKAKAALDGGIKRYDTLLAEAAQAAPSKTGEIQQMRNA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LPAVVSGPCSGAINAGAEQVTVESIERASKLMSTVCDPAIDQIVNTTVSFNDGLIKETAA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IKEETARRTSTTIWTTLGCILGATLLIIALAIFVVRGGIVAPLRRLMDKMVAMGEGKLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
EVEGTARKDEIGAMGRTLELMRVQLGEAEVARQEQAQRQEVERKTLERREHLAQGFVARM
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDLASGFANSSQEVAESARNLSAAADQTSQQAQSVAAAAEEAATNVQTVAASSEELAASV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
REINGQVSHSAVVAERAYKEAESSNQRIADLAKAAADIGDVINLIKGIADQTNLLALNAT
HHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECH
IEAARAGEAGKGFAVVATEVKELASQTSKATADIYTKVTEIQTATQGTVASMSEIIRVIT
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
EVKQISSSIAGAVEQQGAATGEIAQNCQQAATGTQDVTNNISGVGQAAQTTGAASSQLLA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCHHHHHHH
LSQGLSSQATDLRSVVEGFVRDLNAA
HHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKYSNLPMTAKVVTLLAALGVTSLAGGLYAASGMSDIQTTYVDLINGHQTAILRVARAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH
RSAQTVRAEIYRAIVATTESEDQKAKAALDGGIKRYDTLLAEAAQAAPSKTGEIQQMRNA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LPAVVSGPCSGAINAGAEQVTVESIERASKLMSTVCDPAIDQIVNTTVSFNDGLIKETAA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IKEETARRTSTTIWTTLGCILGATLLIIALAIFVVRGGIVAPLRRLMDKMVAMGEGKLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
EVEGTARKDEIGAMGRTLELMRVQLGEAEVARQEQAQRQEVERKTLERREHLAQGFVARM
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDLASGFANSSQEVAESARNLSAAADQTSQQAQSVAAAAEEAATNVQTVAASSEELAASV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
REINGQVSHSAVVAERAYKEAESSNQRIADLAKAAADIGDVINLIKGIADQTNLLALNAT
HHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECH
IEAARAGEAGKGFAVVATEVKELASQTSKATADIYTKVTEIQTATQGTVASMSEIIRVIT
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
EVKQISSSIAGAVEQQGAATGEIAQNCQQAATGTQDVTNNISGVGQAAQTTGAASSQLLA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCHHHHHHH
LSQGLSSQATDLRSVVEGFVRDLNAA
HHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6402709; 7610040; 9278503; 8384293; 6213619; 2033064; 10466731 [H]