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The map label for this gene is bdlA [H]

Identifier: 158424777

GI number: 158424777

Start: 3606945

End: 3608585

Strand: Direct

Name: bdlA [H]

Synonym: AZC_3153

Alternate gene names: 158424777

Gene position: 3606945-3608585 (Clockwise)

Preceding gene: 158424770

Following gene: 158424779

Centisome position: 67.17

GC content: 65.33

Gene sequence:

>1641_bases
TTGGCTTTGTCTCGCCCGGTCCGCCCTACGCCGAAGCCCAACTGGTATGCTTGCCATATAAAGGCAAATTCCGGCTCCAA
CGCAGCAGGACGGCGACTGGCAGAAGCGTCATTGTCTGCCGCGACAAAGGTAACGACACCAGTGCTGAGGGGGCGACCCA
TGTTTCCATGGTTCAACGCAAAGATTGATGCCCAGACGATCAAGGCGCTCGACCGGTCGCTGGCGATCATCGAGTTCACG
CCATCTGGAGACGTGATCACCGCCAATGCGAACTTCCTGAAGGTGGTGGGCTATTCACTCGACGAGATCCGTGGCCGGCA
TCACCGGACCTTCATGGACCCGGTAGAGGCTCAGAGCCCGGAGTACCAGGCCTTCTGGACCAGCCTCGGCAAGGGGCAGT
TCTATGCCGGCGAGTTCCGCCGCTTCGGCAAGGGCGGGCACGAAGCCTGGCTGGAAGCCACCTACAATCCTGTCATGGAC
GCCTCCGGGCGCGTCATCAAGGTGGTGAAGTTCGCCTCCGACATCACCGAGCGCAAGCGCCGCACCGCCGAGTTCGAGGG
TCAGGTGGCCGCCATCTCCAAGTCGCAGGCGGTGATCCACTTCACCCTGGACGGCACCATCACGGAAGCGAACCAGAACT
TCCTCGATGCCCTCGGCTATCGCCTTGAGGAGATCCAGGGTCGCCACCACTCCATGTTCGTGTCGCCCGAGGAAAAGAAC
AGCCCCTCCTACCGCGCCTTCTGGGATGCGCTGCGCCGGGGCGAATACCAGCAGGCGGAATACAAGCGGCTGGGCAAGGG
CGGGAAGGAAGTCTGGATCCAGGCCACCTACACGCCCATCTTCGATGCCGCGGGCAAACCCTTCAAGGTGGTGAAGTTCG
CCACCGACATCACCGAGGCCGTGAAGCAGCGCATGCATCGTGCCGGCGTGCAGAAGGAGATCGCCGCCGATCTCGAGCGC
ATCAGCCAGGAACTGACGCAGGCCAACACGCAGGCGGCCTCCGCCTCTGCCGCCGCCGAGCAGACGGCGGGCAACGTGCA
GTCGGTGGCGGCTGCCGCCGAGGAACTGGCGGCCTCCGTCGAGGAGATCCGCCGGCAGATCCACCAGTCGAGCACGCTTG
CGAGAACGGCGGCGAGCGAGGGCGCGCGCACCAACACCATTGTCACGAGCCTCACCGGCGCCGCGCAGAAGATCGGCGAC
GTGGTGAGCCTCATCGATTCCATCGCCGAGCAGACCAACCTGCTGGCGCTCAACGCCACCATCGAGGCCGCGCGTGCGGG
CGATGCCGGCAAGGGCTTCTCCGTGGTCGCGCAGGAGGTGAAGAGCCTCGCCGGCCAGACCTCCAAGGCCACCAGCGAGA
TCGCCTCGCAGATCGAGGCGGTGCAGCAGGTCACGCAGCAGGCGGTGCAGGCCCTCGGCTCGATCACCGGCACCATCTCC
GACCTCAACGACGTGGCCTCGGTCATCGCATCGGCGGTGGAGGAGCAGACGGCGGTGACGCGCGAGGTCTCCTCCAACAT
GCAGGGGGCGGCCCAGGGCGTCGAGATGGTGAAGGCCAACATGAATGCCATCGCCGGCTCGACCAACCAGGTGGAACAGG
CGACCCGTCAGGTCCGCCAGGCGGCGGCGTCCATCGCCTGA

Upstream 100 bases:

>100_bases
GCGCCGCAAACAGCCTCCCCTCGCGCGCTGGATCACGTTGCGGCAGACGTTTTAGCTCCAAATCGGAACGGTCCGATCGG
GGCGAAGATCAAGCCCCGGC

Downstream 100 bases:

>100_bases
GGCGGCCCTGCCCGGCAGCGCCGTCCGTGAATCGAAAGCGCACAGCGAAAAGGTGCGCGCCATCGGGCGCGTGCCGGATG
AGGCAGGCGCCCGCGAAGGG

Product: methyl-accepting chemotaxis receptor

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MALSRPVRPTPKPNWYACHIKANSGSNAAGRRLAEASLSAATKVTTPVLRGRPMFPWFNAKIDAQTIKALDRSLAIIEFT
PSGDVITANANFLKVVGYSLDEIRGRHHRTFMDPVEAQSPEYQAFWTSLGKGQFYAGEFRRFGKGGHEAWLEATYNPVMD
ASGRVIKVVKFASDITERKRRTAEFEGQVAAISKSQAVIHFTLDGTITEANQNFLDALGYRLEEIQGRHHSMFVSPEEKN
SPSYRAFWDALRRGEYQQAEYKRLGKGGKEVWIQATYTPIFDAAGKPFKVVKFATDITEAVKQRMHRAGVQKEIAADLER
ISQELTQANTQAASASAAAEQTAGNVQSVAAAAEELAASVEEIRRQIHQSSTLARTAASEGARTNTIVTSLTGAAQKIGD
VVSLIDSIAEQTNLLALNATIEAARAGDAGKGFSVVAQEVKSLAGQTSKATSEIASQIEAVQQVTQQAVQALGSITGTIS
DLNDVASVIASAVEEQTAVTREVSSNMQGAAQGVEMVKANMNAIAGSTNQVEQATRQVRQAAASIA

Sequences:

>Translated_546_residues
MALSRPVRPTPKPNWYACHIKANSGSNAAGRRLAEASLSAATKVTTPVLRGRPMFPWFNAKIDAQTIKALDRSLAIIEFT
PSGDVITANANFLKVVGYSLDEIRGRHHRTFMDPVEAQSPEYQAFWTSLGKGQFYAGEFRRFGKGGHEAWLEATYNPVMD
ASGRVIKVVKFASDITERKRRTAEFEGQVAAISKSQAVIHFTLDGTITEANQNFLDALGYRLEEIQGRHHSMFVSPEEKN
SPSYRAFWDALRRGEYQQAEYKRLGKGGKEVWIQATYTPIFDAAGKPFKVVKFATDITEAVKQRMHRAGVQKEIAADLER
ISQELTQANTQAASASAAAEQTAGNVQSVAAAAEELAASVEEIRRQIHQSSTLARTAASEGARTNTIVTSLTGAAQKIGD
VVSLIDSIAEQTNLLALNATIEAARAGDAGKGFSVVAQEVKSLAGQTSKATSEIASQIEAVQQVTQQAVQALGSITGTIS
DLNDVASVIASAVEEQTAVTREVSSNMQGAAQGVEMVKANMNAIAGSTNQVEQATRQVRQAAASIA
>Mature_545_residues
ALSRPVRPTPKPNWYACHIKANSGSNAAGRRLAEASLSAATKVTTPVLRGRPMFPWFNAKIDAQTIKALDRSLAIIEFTP
SGDVITANANFLKVVGYSLDEIRGRHHRTFMDPVEAQSPEYQAFWTSLGKGQFYAGEFRRFGKGGHEAWLEATYNPVMDA
SGRVIKVVKFASDITERKRRTAEFEGQVAAISKSQAVIHFTLDGTITEANQNFLDALGYRLEEIQGRHHSMFVSPEEKNS
PSYRAFWDALRRGEYQQAEYKRLGKGGKEVWIQATYTPIFDAAGKPFKVVKFATDITEAVKQRMHRAGVQKEIAADLERI
SQELTQANTQAASASAAAEQTAGNVQSVAAAAEELAASVEEIRRQIHQSSTLARTAASEGARTNTIVTSLTGAAQKIGDV
VSLIDSIAEQTNLLALNATIEAARAGDAGKGFSVVAQEVKSLAGQTSKATSEIASQIEAVQQVTQQAVQALGSITGTISD
LNDVASVIASAVEEQTAVTREVSSNMQGAAQGVEMVKANMNAIAGSTNQVEQATRQVRQAAASIA

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=175, Percent_Identity=40.5714285714286, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI2367378, Length=176, Percent_Identity=38.0681818181818, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1788195, Length=190, Percent_Identity=35.2631578947368, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1787690, Length=210, Percent_Identity=34.2857142857143, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI1789453, Length=207, Percent_Identity=33.8164251207729, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 58748; Mature: 58617

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSRPVRPTPKPNWYACHIKANSGSNAAGRRLAEASLSAATKVTTPVLRGRPMFPWFNA
CCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KIDAQTIKALDRSLAIIEFTPSGDVITANANFLKVVGYSLDEIRGRHHRTFMDPVEAQSP
EECHHHHHHHHHCEEEEEECCCCCEEECCCCEEEECCCCHHHHCCCCCCCCCCCHHCCCC
EYQAFWTSLGKGQFYAGEFRRFGKGGHEAWLEATYNPVMDASGRVIKVVKFASDITERKR
CHHHHHHHCCCCCEEHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHH
RTAEFEGQVAAISKSQAVIHFTLDGTITEANQNFLDALGYRLEEIQGRHHSMFVSPEEKN
HHHHHCCCEEEEECCCEEEEEEECCEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
SPSYRAFWDALRRGEYQQAEYKRLGKGGKEVWIQATYTPIFDAAGKPFKVVKFATDITEA
CCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCHHHHCCCCCEEEHHHHHHHHHH
VKQRMHRAGVQKEIAADLERISQELTQANTQAASASAAAEQTAGNVQSVAAAAEELAASV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
EEIRRQIHQSSTLARTAASEGARTNTIVTSLTGAAQKIGDVVSLIDSIAEQTNLLALNAT
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECH
IEAARAGDAGKGFSVVAQEVKSLAGQTSKATSEIASQIEAVQQVTQQAVQALGSITGTIS
HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLNDVASVIASAVEEQTAVTREVSSNMQGAAQGVEMVKANMNAIAGSTNQVEQATRQVRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AAASIA
HHHCCC
>Mature Secondary Structure 
ALSRPVRPTPKPNWYACHIKANSGSNAAGRRLAEASLSAATKVTTPVLRGRPMFPWFNA
CCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KIDAQTIKALDRSLAIIEFTPSGDVITANANFLKVVGYSLDEIRGRHHRTFMDPVEAQSP
EECHHHHHHHHHCEEEEEECCCCCEEECCCCEEEECCCCHHHHCCCCCCCCCCCHHCCCC
EYQAFWTSLGKGQFYAGEFRRFGKGGHEAWLEATYNPVMDASGRVIKVVKFASDITERKR
CHHHHHHHCCCCCEEHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHH
RTAEFEGQVAAISKSQAVIHFTLDGTITEANQNFLDALGYRLEEIQGRHHSMFVSPEEKN
HHHHHCCCEEEEECCCEEEEEEECCEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
SPSYRAFWDALRRGEYQQAEYKRLGKGGKEVWIQATYTPIFDAAGKPFKVVKFATDITEA
CCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCHHHHCCCCCEEEHHHHHHHHHH
VKQRMHRAGVQKEIAADLERISQELTQANTQAASASAAAEQTAGNVQSVAAAAEELAASV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
EEIRRQIHQSSTLARTAASEGARTNTIVTSLTGAAQKIGDVVSLIDSIAEQTNLLALNAT
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECH
IEAARAGDAGKGFSVVAQEVKSLAGQTSKATSEIASQIEAVQQVTQQAVQALGSITGTIS
HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLNDVASVIASAVEEQTAVTREVSSNMQGAAQGVEMVKANMNAIAGSTNQVEQATRQVRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AAASIA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]